| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752392
GI number: 16752392
Start: 109982
End: 110983
Strand: Direct
Name: Not Available
Synonym: CP0099
Alternate gene names: NA
Gene position: 109982-110983 (Clockwise)
Preceding gene: 16752391
Following gene: 16752393
Centisome position: 8.94
GC content: 44.31
Gene sequence:
>1002_bases ATGGCGACTAACGCAATTAGATCGGCAGGAAGTGCAGCAAGTAAGATGCTGCTGCCAGTTGCCAAAGAACCAGCGGCTGT CAGCTCCTTTGCTCAGAAAGGGATTTATTGTATTCAACAATTTTTTACAAACCCTGGGAATAAGTTAGCAAAGTTTGTAG GGGCAACAAAAAGTTTAGATAAATGCTTTAAGCTAAGTAAGGCGGTTTCTGACTGTGTCGTAGGATCGCTGGAAGAGGCG GGATGCACAGGGGACGCATTGACCTCCGCGAGAAACGCCCAGGGTATGTTAAAAACAACTCGAGAAGTTGTTGCCTTAGC TAATGTGCTCAATGGAGCTGTTCCATCTATCGTTAACTCGACTCAGAGGTGTTACCAATACACACGTCAAGCCTTCGAGT TAGGAAGCAAGACAAAAGAAAGAAAAACGCCTGGGGAGTATAGTAAAATGCTATTAACTCGAGGTGATTACCTATTGGCA GCTTCCAGGGAAGCTTGTACGGCAGTCGGTGCAACGACTTACTCAGCGACATTCGGTGTTTTACGTCCGTTAATGTTAAT CAATAAACTCACAGCAAAACCATTCTTAGACAAAGCGACTGTAGGCAATTTTGGCACGGCTGTTGCTGGAATTATGACCA TTAATCATATGGCAGGAGTTGCTGGTGCTGTTGGCGGAATCGCATTAGAACAAAAGCTGTTCAAACGTGCGAAGGAATCC CTATACAATGAGAGATGTGCCTTAGAAAACCAACAATCTCAGTTGAGTGGGGACGTGATTCTAAGCGCGGAAAGGGCATT ACGTAAAGAACACGTTGCTACTCTAAAAAGAAATGTTTTAACTCTTCTTGAAAAAGCTTTAGAGTTGGTAGTGGATGGAG TCAAACTCATTCCTTTACCGATTACAGTGGCTTGCTCCGCTGCAATTTCTGGAGCCTTGACGGCAGCATCCGCAGGAATT GGCTTATATAGCATATGGCAGAAAACAAAGTCTGGCAAATAA
Upstream 100 bases:
>100_bases TACAACGTGTTTTTTATTTAGGGCATTTAAACTAAATTAAGTCGTTTTATGTTATTATAGGCTCTAATTTTTTTTTAAAA AGCCTTGTAAGGAGGTAAAA
Downstream 100 bases:
>100_bases GCTAGTTTTATCTTTATTTTAAAGAAGTCGCTTCTAAAAAATTTTTTGGAAGCGACTTTCTATTTCTATAAATAGGAATT TTCCAAGAATCTTTTATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLDKCFKLSKAVSDCVVGSLEEA GCTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNSTQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLA ASREACTAVGATTYSATFGVLRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKES LYNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLPITVACSAAISGALTAASAGI GLYSIWQKTKSGK
Sequences:
>Translated_333_residues MATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLDKCFKLSKAVSDCVVGSLEEA GCTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNSTQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLA ASREACTAVGATTYSATFGVLRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKES LYNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLPITVACSAAISGALTAASAGI GLYSIWQKTKSGK >Mature_332_residues ATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLDKCFKLSKAVSDCVVGSLEEAG CTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNSTQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLAA SREACTAVGATTYSATFGVLRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKESL YNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLPITVACSAAISGALTAASAGIG LYSIWQKTKSGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35149; Mature: 35018
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLD CCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KCFKLSKAVSDCVVGSLEEAGCTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNS HHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH TQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLAASREACTAVGATTYSATFGV HHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCHHHHHHHHH LRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKES HHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLP HHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCH ITVACSAAISGALTAASAGIGLYSIWQKTKSGK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure ATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLD CCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH KCFKLSKAVSDCVVGSLEEAGCTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNS HHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH TQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLAASREACTAVGATTYSATFGV HHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCHHHHHHHHH LRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKES HHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLP HHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCH ITVACSAAISGALTAASAGIGLYSIWQKTKSGK HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA