Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752392

GI number: 16752392

Start: 109982

End: 110983

Strand: Direct

Name: Not Available

Synonym: CP0099

Alternate gene names: NA

Gene position: 109982-110983 (Clockwise)

Preceding gene: 16752391

Following gene: 16752393

Centisome position: 8.94

GC content: 44.31

Gene sequence:

>1002_bases
ATGGCGACTAACGCAATTAGATCGGCAGGAAGTGCAGCAAGTAAGATGCTGCTGCCAGTTGCCAAAGAACCAGCGGCTGT
CAGCTCCTTTGCTCAGAAAGGGATTTATTGTATTCAACAATTTTTTACAAACCCTGGGAATAAGTTAGCAAAGTTTGTAG
GGGCAACAAAAAGTTTAGATAAATGCTTTAAGCTAAGTAAGGCGGTTTCTGACTGTGTCGTAGGATCGCTGGAAGAGGCG
GGATGCACAGGGGACGCATTGACCTCCGCGAGAAACGCCCAGGGTATGTTAAAAACAACTCGAGAAGTTGTTGCCTTAGC
TAATGTGCTCAATGGAGCTGTTCCATCTATCGTTAACTCGACTCAGAGGTGTTACCAATACACACGTCAAGCCTTCGAGT
TAGGAAGCAAGACAAAAGAAAGAAAAACGCCTGGGGAGTATAGTAAAATGCTATTAACTCGAGGTGATTACCTATTGGCA
GCTTCCAGGGAAGCTTGTACGGCAGTCGGTGCAACGACTTACTCAGCGACATTCGGTGTTTTACGTCCGTTAATGTTAAT
CAATAAACTCACAGCAAAACCATTCTTAGACAAAGCGACTGTAGGCAATTTTGGCACGGCTGTTGCTGGAATTATGACCA
TTAATCATATGGCAGGAGTTGCTGGTGCTGTTGGCGGAATCGCATTAGAACAAAAGCTGTTCAAACGTGCGAAGGAATCC
CTATACAATGAGAGATGTGCCTTAGAAAACCAACAATCTCAGTTGAGTGGGGACGTGATTCTAAGCGCGGAAAGGGCATT
ACGTAAAGAACACGTTGCTACTCTAAAAAGAAATGTTTTAACTCTTCTTGAAAAAGCTTTAGAGTTGGTAGTGGATGGAG
TCAAACTCATTCCTTTACCGATTACAGTGGCTTGCTCCGCTGCAATTTCTGGAGCCTTGACGGCAGCATCCGCAGGAATT
GGCTTATATAGCATATGGCAGAAAACAAAGTCTGGCAAATAA

Upstream 100 bases:

>100_bases
TACAACGTGTTTTTTATTTAGGGCATTTAAACTAAATTAAGTCGTTTTATGTTATTATAGGCTCTAATTTTTTTTTAAAA
AGCCTTGTAAGGAGGTAAAA

Downstream 100 bases:

>100_bases
GCTAGTTTTATCTTTATTTTAAAGAAGTCGCTTCTAAAAAATTTTTTGGAAGCGACTTTCTATTTCTATAAATAGGAATT
TTCCAAGAATCTTTTATCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLDKCFKLSKAVSDCVVGSLEEA
GCTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNSTQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLA
ASREACTAVGATTYSATFGVLRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKES
LYNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLPITVACSAAISGALTAASAGI
GLYSIWQKTKSGK

Sequences:

>Translated_333_residues
MATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLDKCFKLSKAVSDCVVGSLEEA
GCTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNSTQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLA
ASREACTAVGATTYSATFGVLRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKES
LYNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLPITVACSAAISGALTAASAGI
GLYSIWQKTKSGK
>Mature_332_residues
ATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLDKCFKLSKAVSDCVVGSLEEAG
CTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNSTQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLAA
SREACTAVGATTYSATFGVLRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKESL
YNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLPITVACSAAISGALTAASAGIG
LYSIWQKTKSGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35149; Mature: 35018

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLD
CCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KCFKLSKAVSDCVVGSLEEAGCTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNS
HHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
TQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLAASREACTAVGATTYSATFGV
HHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCHHHHHHHHH
LRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKES
HHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLP
HHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCH
ITVACSAAISGALTAASAGIGLYSIWQKTKSGK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ATNAIRSAGSAASKMLLPVAKEPAAVSSFAQKGIYCIQQFFTNPGNKLAKFVGATKSLD
CCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KCFKLSKAVSDCVVGSLEEAGCTGDALTSARNAQGMLKTTREVVALANVLNGAVPSIVNS
HHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
TQRCYQYTRQAFELGSKTKERKTPGEYSKMLLTRGDYLLAASREACTAVGATTYSATFGV
HHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCEEEECCHHHHHHHCCHHHHHHHHH
LRPLMLINKLTAKPFLDKATVGNFGTAVAGIMTINHMAGVAGAVGGIALEQKLFKRAKES
HHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYNERCALENQQSQLSGDVILSAERALRKEHVATLKRNVLTLLEKALELVVDGVKLIPLP
HHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCH
ITVACSAAISGALTAASAGIGLYSIWQKTKSGK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA