| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 16752383
GI number: 16752383
Start: 103112
End: 103537
Strand: Direct
Name: Not Available
Synonym: CP0090
Alternate gene names: 16752383
Gene position: 103112-103537 (Clockwise)
Preceding gene: 16752382
Following gene: 16752385
Centisome position: 8.38
GC content: 39.91
Gene sequence:
>426_bases ATGGGTAGATACAGAAGAGTAAGCCATTCTTCTCAAGAAACCCTATTACTAGGAACTGAGTTAGGACAAGTCCTTGTTCC AGGAGCTGTATTGCTCTTATTTGGTGATTATGGGGCTGGTAAGACAGAATTTGTACGTGGCATAGTCTCTGGATATCTCG GAGATACTATCGCGGAAGAAGTTGCTAGTCCCTCGTTCTCTATATTACATGTTTATGGTAATGAACCTAAGCGGTTGTGC CACTATGATCTTTACCGGATTGATCAGAAAAATCAGGAATACATTTTTCAAGATGCAGAAGAAGACGATGTCCTTTGTAT TGAATGGGCGGATCGCTTGCCTAAGCCACGATTTTGTGATACAATAAATATCTACATTACCATGCAAACAAACATGGAAA GAGAAATTATTATAGAGAAGCGCTAG
Upstream 100 bases:
>100_bases CCTTCCTTTCTCTATTGCAAGATGCGCTGGTAGAAGATAAGATCGCAGCATTTATAGAAAGTTTAGCAGACGATACAGCC TTTCATGTGTACATTAGCCA
Downstream 100 bases:
>100_bases TCTTTATTCTCCATAGTATCCTTGCATACTGATAGGCATAAAGAAGAGTGAGCCGCGATGTAATAATAGTATAGGTTCCC TGGAACCCTTTTCTGTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MGRYRRVSHSSQETLLLGTELGQVLVPGAVLLLFGDYGAGKTEFVRGIVSGYLGDTIAEEVASPSFSILHVYGNEPKRLC HYDLYRIDQKNQEYIFQDAEEDDVLCIEWADRLPKPRFCDTINIYITMQTNMEREIIIEKR
Sequences:
>Translated_141_residues MGRYRRVSHSSQETLLLGTELGQVLVPGAVLLLFGDYGAGKTEFVRGIVSGYLGDTIAEEVASPSFSILHVYGNEPKRLC HYDLYRIDQKNQEYIFQDAEEDDVLCIEWADRLPKPRFCDTINIYITMQTNMEREIIIEKR >Mature_140_residues GRYRRVSHSSQETLLLGTELGQVLVPGAVLLLFGDYGAGKTEFVRGIVSGYLGDTIAEEVASPSFSILHVYGNEPKRLCH YDLYRIDQKNQEYIFQDAEEDDVLCIEWADRLPKPRFCDTINIYITMQTNMEREIIIEKR
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16194; Mature: 16062
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYRRVSHSSQETLLLGTELGQVLVPGAVLLLFGDYGAGKTEFVRGIVSGYLGDTIAEE CCCCCCCCCCCCCEEEEECCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHH VASPSFSILHVYGNEPKRLCHYDLYRIDQKNQEYIFQDAEEDDVLCIEWADRLPKPRFCD HCCCCEEEEEEECCCCHHHHHHHHEECCCCCCCEEECCCCCCCEEEEEEHHCCCCCCCCC TINIYITMQTNMEREIIIEKR EEEEEEEEECCCCEEEEEECC >Mature Secondary Structure GRYRRVSHSSQETLLLGTELGQVLVPGAVLLLFGDYGAGKTEFVRGIVSGYLGDTIAEE CCCCCCCCCCCCEEEEECCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHH VASPSFSILHVYGNEPKRLCHYDLYRIDQKNQEYIFQDAEEDDVLCIEWADRLPKPRFCD HCCCCEEEEEEECCCCHHHHHHHHEECCCCCCCEEECCCCCCCEEEEEEHHCCCCCCCCC TINIYITMQTNMEREIIIEKR EEEEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]