| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752366
GI number: 16752366
Start: 83665
End: 84819
Strand: Direct
Name: Not Available
Synonym: CP0072
Alternate gene names: NA
Gene position: 83665-84819 (Clockwise)
Preceding gene: 16752365
Following gene: 16752367
Centisome position: 6.8
GC content: 40.87
Gene sequence:
>1155_bases ATGATTTTAGATTTTCAATTTTCTATAGGATATTATTTACGGGTTCTTGAACTAGCAATTAGGGATGGCACGCGCATACT CGCATATGACAGAAAACGACTTCTCTTAGATGCATGGCCGGTCAATGACCCCTTACCTACCAACTATGATACAAGCGTAT CCACGATTCGTCAGGTAATTCACGAGCTCTTTTCCTGGTCAGCAATTTCTTATTCGATATCGAGTCGACTTTTAGCAATT ATTGAATTGCGTTTGCATGAAGAAAAACCCCAAACAGGATGGCTCTACCGGCTGTTCTTCCCCTCCAAGTATCACATCAA AAAAGCCATTGTAGACAAACTATGTATGTTTAAGTCTTTGATTCTTTTTGAGTCCAAGCGTCCTGTCGATAAAATTGTGC AAGCTGCAAATAAGGTGTTCTCTAAAGGGAAAAGTAATTTTTCCTCATGGGAAGATTTTACTCATGAGGTTACGGTATCA GAAGTTCAGACGCCTCTGGCTGGAGAGGTGCAAAGAAGATTGGCAGCAGATGCCTCTCTACAAATGATCATAGAAGCGTT AACCACATTACTTGAAGGGCATACGGCGTATCTTCCCTTAAGTTTAGAATTGCTCAACCAGTTTATAGGAGAAAAAGCGC AACCCCTAAAAACATTATCAGAAAAGAGCTACGTATTGTTACGCGAGCTGATCCAGCTTTTTTCTTTGAGTGCCGAGGAT TTCCAAACGATTATTATGAGTATTATCTCAGATTCTCTATCTGAGGTATTGGCAAACTCTCTTATTGGGAACCAGCCTTT AACATTTCATGGGAAGACTTTTGTAGGTCTATGGCAAGAGACTGCCCTAGCCTCCCCTGAAGATTCTAAATTAGCCCTGG GCTTTCTTGCAGAAGTATTGCGGAAAGTCATCGTAGAAAAGAAACTCCATGTATCTAAGTCCGACAATACCACTCCTGAG GAGGTGGGGAATATTTATAGTATTCGAGACCAAAATCCCGCCCTGTGGGATAAAATGATTACCATGTTACTTATGCGTTG GTTGTTAGACTATGATAGAGATATCGGTATAGCCTTAAGAAAAGCAGCGGAATACTATAATCCGCATCCTTCTTTTTGGA GACAATTCTTGAGATTATGGCAACGTCGTCCGTAA
Upstream 100 bases:
>100_bases ATTGTTAACGATTGCCTATAGTAACTTCAGGAAATAAATATGATGAAATAATATTTCTCCTGAAGAATAAAACATAGAAA AGCTCTAAGTACCACTATCT
Downstream 100 bases:
>100_bases TGCATATTTTTTACTATACTGATGGCTCTCTTTATTTTGTCTTCTGTAAGATTTTCCAAGCAAAATAGGTGATGACGAGG TATACTCTATGTCACTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MILDFQFSIGYYLRVLELAIRDGTRILAYDRKRLLLDAWPVNDPLPTNYDTSVSTIRQVIHELFSWSAISYSISSRLLAI IELRLHEEKPQTGWLYRLFFPSKYHIKKAIVDKLCMFKSLILFESKRPVDKIVQAANKVFSKGKSNFSSWEDFTHEVTVS EVQTPLAGEVQRRLAADASLQMIIEALTTLLEGHTAYLPLSLELLNQFIGEKAQPLKTLSEKSYVLLRELIQLFSLSAED FQTIIMSIISDSLSEVLANSLIGNQPLTFHGKTFVGLWQETALASPEDSKLALGFLAEVLRKVIVEKKLHVSKSDNTTPE EVGNIYSIRDQNPALWDKMITMLLMRWLLDYDRDIGIALRKAAEYYNPHPSFWRQFLRLWQRRP
Sequences:
>Translated_384_residues MILDFQFSIGYYLRVLELAIRDGTRILAYDRKRLLLDAWPVNDPLPTNYDTSVSTIRQVIHELFSWSAISYSISSRLLAI IELRLHEEKPQTGWLYRLFFPSKYHIKKAIVDKLCMFKSLILFESKRPVDKIVQAANKVFSKGKSNFSSWEDFTHEVTVS EVQTPLAGEVQRRLAADASLQMIIEALTTLLEGHTAYLPLSLELLNQFIGEKAQPLKTLSEKSYVLLRELIQLFSLSAED FQTIIMSIISDSLSEVLANSLIGNQPLTFHGKTFVGLWQETALASPEDSKLALGFLAEVLRKVIVEKKLHVSKSDNTTPE EVGNIYSIRDQNPALWDKMITMLLMRWLLDYDRDIGIALRKAAEYYNPHPSFWRQFLRLWQRRP >Mature_384_residues MILDFQFSIGYYLRVLELAIRDGTRILAYDRKRLLLDAWPVNDPLPTNYDTSVSTIRQVIHELFSWSAISYSISSRLLAI IELRLHEEKPQTGWLYRLFFPSKYHIKKAIVDKLCMFKSLILFESKRPVDKIVQAANKVFSKGKSNFSSWEDFTHEVTVS EVQTPLAGEVQRRLAADASLQMIIEALTTLLEGHTAYLPLSLELLNQFIGEKAQPLKTLSEKSYVLLRELIQLFSLSAED FQTIIMSIISDSLSEVLANSLIGNQPLTFHGKTFVGLWQETALASPEDSKLALGFLAEVLRKVIVEKKLHVSKSDNTTPE EVGNIYSIRDQNPALWDKMITMLLMRWLLDYDRDIGIALRKAAEYYNPHPSFWRQFLRLWQRRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0675/CT_696/TC_0068 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y675_CHLPN (Q9Z7M9)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: G72048 - PIR: H86574 - RefSeq: NP_224871.1 - RefSeq: NP_300731.1 - RefSeq: NP_444624.1 - RefSeq: NP_876974.1 - GeneID: 1467381 - GeneID: 895459 - GeneID: 919434 - GeneID: 963731 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0072 - KEGG: cpj:CPj0675 - KEGG: cpn:CPn0675 - KEGG: cpt:CpB0702 - TIGR: CP_0072 - HOGENOM: HBG057018 - OMA: SWEDFTH - ProtClustDB: CLSK871545 - BioCyc: CPNE115711:CP_0072-MONOMER - BioCyc: CPNE115713:CPN0675-MONOMER - BioCyc: CPNE138677:CPJ0675-MONOMER - BioCyc: CPNE182082:CPB0702-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44243; Mature: 44243
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILDFQFSIGYYLRVLELAIRDGTRILAYDRKRLLLDAWPVNDPLPTNYDTSVSTIRQVI CEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCHHEEEECCCCCCCCCCCCCHHHHHHHHH HELFSWSAISYSISSRLLAIIELRLHEEKPQTGWLYRLFFPSKYHIKKAIVDKLCMFKSL HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH ILFESKRPVDKIVQAANKVFSKGKSNFSSWEDFTHEVTVSEVQTPLAGEVQRRLAADASL HHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEHHHHCCCHHHHHHHHHHHHHHH QMIIEALTTLLEGHTAYLPLSLELLNQFIGEKAQPLKTLSEKSYVLLRELIQLFSLSAED HHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH FQTIIMSIISDSLSEVLANSLIGNQPLTFHGKTFVGLWQETALASPEDSKLALGFLAEVL HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH RKVIVEKKLHVSKSDNTTPEEVGNIYSIRDQNPALWDKMITMLLMRWLLDYDRDIGIALR HHHHHHHHHCCCCCCCCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH KAAEYYNPHPSFWRQFLRLWQRRP HHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MILDFQFSIGYYLRVLELAIRDGTRILAYDRKRLLLDAWPVNDPLPTNYDTSVSTIRQVI CEEEEEHHHHHHHHHHHHHHHCCCEEEEECCCHHEEEECCCCCCCCCCCCCHHHHHHHHH HELFSWSAISYSISSRLLAIIELRLHEEKPQTGWLYRLFFPSKYHIKKAIVDKLCMFKSL HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH ILFESKRPVDKIVQAANKVFSKGKSNFSSWEDFTHEVTVSEVQTPLAGEVQRRLAADASL HHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEHHHHCCCHHHHHHHHHHHHHHH QMIIEALTTLLEGHTAYLPLSLELLNQFIGEKAQPLKTLSEKSYVLLRELIQLFSLSAED HHHHHHHHHHHCCCCEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH FQTIIMSIISDSLSEVLANSLIGNQPLTFHGKTFVGLWQETALASPEDSKLALGFLAEVL HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH RKVIVEKKLHVSKSDNTTPEEVGNIYSIRDQNPALWDKMITMLLMRWLLDYDRDIGIALR HHHHHHHHHCCCCCCCCCHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH KAAEYYNPHPSFWRQFLRLWQRRP HHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362