| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752360
GI number: 16752360
Start: 76655
End: 77329
Strand: Direct
Name: Not Available
Synonym: CP0066
Alternate gene names: NA
Gene position: 76655-77329 (Clockwise)
Preceding gene: 16752356
Following gene: 16752361
Centisome position: 6.23
GC content: 36.89
Gene sequence:
>675_bases ATGCAAACCCTTGCTCGTCTATTTGGCCAATCTCCATTTGCTCCTTTACAAGCTCATCTGGAAATGGTGGTCTCTTGTGT GGAATACATGCTTCCTATATTCACTGCTCTCCGAGATGGAAGATATGAAGAATTATTAGAAATGGCAAAACTTGTTTCTG ATAAAGAGTATCAAGCAGATTGTATAAAAAATGATATGAGGAATCATCTTCCTGCAGGATTATTCATGCCGATATCTCGA GCGGGGATTCTAGAAATTATTTCTATACAAGATAGCATCGCGGATACTGCTGAAGATGTTGCTATCTTATTAACCATCAG ACGATTAAACTTTTATCCATCTATGGAAACGCTTTTTTTCCGATTTTTGGAAAAAAATCTAGAAGCTTTTGAGTTAACTA TGACATTGCTACATGAATTCAACCAATTGCTTGAAAGTTCATTTGGGGGGAGGAAGGCAGATAAAGCACGCTTGCTTGTA GGGCGTGTGGCTAAATCTGAACATGAATCGGATGTTTTGCAACGAGAACTTATGCAAATATTTTTTTCTGATGATTTTAT AATTCCTGAAAAAGAGTTTTATCTTTGGTTACAAGTAATTCGACGCACTGCGGGGATTTCAGATAGTTCTGAAAAGCTCG CACATAGAATTAATATGACCCTAGAAGAAAAGTAA
Upstream 100 bases:
>100_bases AGGTTATGGATAGATCCTCTATCTGTAAAATGGGATTAGAAGCCATAAGTCGTTTACAAGATCGTTTAGGCAAGTTATTA TTGCGAAAAAGGCTATTCTT
Downstream 100 bases:
>100_bases TACTCCATGCTTCCATTAATCATTTTTGTCCTTCTATGTGGCTTTTATACTTCTTGGAATATAGGAGCTAATGATGTCGC TAATGCTGTAGGCCCTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MQTLARLFGQSPFAPLQAHLEMVVSCVEYMLPIFTALRDGRYEELLEMAKLVSDKEYQADCIKNDMRNHLPAGLFMPISR AGILEIISIQDSIADTAEDVAILLTIRRLNFYPSMETLFFRFLEKNLEAFELTMTLLHEFNQLLESSFGGRKADKARLLV GRVAKSEHESDVLQRELMQIFFSDDFIIPEKEFYLWLQVIRRTAGISDSSEKLAHRINMTLEEK
Sequences:
>Translated_224_residues MQTLARLFGQSPFAPLQAHLEMVVSCVEYMLPIFTALRDGRYEELLEMAKLVSDKEYQADCIKNDMRNHLPAGLFMPISR AGILEIISIQDSIADTAEDVAILLTIRRLNFYPSMETLFFRFLEKNLEAFELTMTLLHEFNQLLESSFGGRKADKARLLV GRVAKSEHESDVLQRELMQIFFSDDFIIPEKEFYLWLQVIRRTAGISDSSEKLAHRINMTLEEK >Mature_224_residues MQTLARLFGQSPFAPLQAHLEMVVSCVEYMLPIFTALRDGRYEELLEMAKLVSDKEYQADCIKNDMRNHLPAGLFMPISR AGILEIISIQDSIADTAEDVAILLTIRRLNFYPSMETLFFRFLEKNLEAFELTMTLLHEFNQLLESSFGGRKADKARLLV GRVAKSEHESDVLQRELMQIFFSDDFIIPEKEFYLWLQVIRRTAGISDSSEKLAHRINMTLEEK
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y681_CHLPN (Q9Z7M3)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: E72049 - PIR: F86575 - RefSeq: NP_224877.1 - RefSeq: NP_300737.1 - RefSeq: NP_444618.1 - RefSeq: NP_876980.1 - ProteinModelPortal: Q9Z7M3 - SMR: Q9Z7M3 - PHCI-2DPAGE: Q9Z7M3 - GeneID: 1467387 - GeneID: 895402 - GeneID: 919440 - GeneID: 963719 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0066 - KEGG: cpj:CPj0681 - KEGG: cpn:CPn0681 - KEGG: cpt:CpB0708 - TIGR: CP_0066 - HOGENOM: HBG733467 - OMA: WVGDLAD - ProtClustDB: CLSK871541 - BioCyc: CPNE115711:CP_0066-MONOMER - BioCyc: CPNE115713:CPN0681-MONOMER - BioCyc: CPNE138677:CPJ0681-MONOMER - BioCyc: CPNE182082:CPB0708-MONOMER - InterPro: IPR002727 - InterPro: IPR018445 - TIGRFAMs: TIGR00153
Pfam domain/function: PF01865 PhoU_div
EC number: NA
Molecular weight: Translated: 25887; Mature: 25887
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLARLFGQSPFAPLQAHLEMVVSCVEYMLPIFTALRDGRYEELLEMAKLVSDKEYQAD CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH CIKNDMRNHLPAGLFMPISRAGILEIISIQDSIADTAEDVAILLTIRRLNFYPSMETLFF HHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RFLEKNLEAFELTMTLLHEFNQLLESSFGGRKADKARLLVGRVAKSEHESDVLQRELMQI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFSDDFIIPEKEFYLWLQVIRRTAGISDSSEKLAHRINMTLEEK HHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCC >Mature Secondary Structure MQTLARLFGQSPFAPLQAHLEMVVSCVEYMLPIFTALRDGRYEELLEMAKLVSDKEYQAD CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH CIKNDMRNHLPAGLFMPISRAGILEIISIQDSIADTAEDVAILLTIRRLNFYPSMETLFF HHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RFLEKNLEAFELTMTLLHEFNQLLESSFGGRKADKARLLVGRVAKSEHESDVLQRELMQI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFSDDFIIPEKEFYLWLQVIRRTAGISDSSEKLAHRINMTLEEK HHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362