| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752334
GI number: 16752334
Start: 47902
End: 48408
Strand: Direct
Name: Not Available
Synonym: CP0040
Alternate gene names: NA
Gene position: 47902-48408 (Clockwise)
Preceding gene: 16752333
Following gene: 16752335
Centisome position: 3.89
GC content: 39.25
Gene sequence:
>507_bases GTGGCAAAATATCCACTAGAGCCTGTTTTAGCGATTAAAAAGGATCGTGTAGATAGAGCAGAAAAAGTTGTTAAAGAAAA ACGACGTCTTTTAGAAATAGAACAAGAGAAATTACGAGAGAAAGAAGCTGAACGCGATAAAGTTAAAAATCACTATATGC AAAAAATCCAACAACTCCGCGATTTGTTGGACGAAGGTACAACAAGCGACGCCGTCTTACAGATAAAATCGTACATTAAA GTGGTTGCAGTACAGCTTTCGGAAGAAGAAGAGAAAGTCAACAAACAAAAAGAAGTTGTGCTTGCTGCTTCTAAAGAACT CGAAAAAGCAGAAGTAAATTTAGCGAAGCGTAGAAAAGAAGAAGAGAAAACACGACTCCATAAAGAAGAATGGATGAAAG AAGCTCTCAAAGAAGAAGCTCGCGCTGAAGAAAAAGAACAAGACGAGATGGGGCAGCTGCTTTTCCAACTGCGCCAGAAA AAAAAACGTGAATCAGGGGGAAGCTAG
Upstream 100 bases:
>100_bases TGAACCGGTTTTTAAAGCAAGATATCCACGAAAAGACAAACTATGAGGAAGCAGCACAACAACTGCGCGCCATTTTCCGG TAAATAAAGAGTAGTATGCT
Downstream 100 bases:
>100_bases TTCATGGAATTAAAGAAAACAGCAGAATCATTATATAGCGCTAAAACAGACAATCACACTGTATACCAGAACTCTCCTGA ACCTAGAGATAGTCGTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MAKYPLEPVLAIKKDRVDRAEKVVKEKRRLLEIEQEKLREKEAERDKVKNHYMQKIQQLRDLLDEGTTSDAVLQIKSYIK VVAVQLSEEEEKVNKQKEVVLAASKELEKAEVNLAKRRKEEEKTRLHKEEWMKEALKEEARAEEKEQDEMGQLLFQLRQK KKRESGGS
Sequences:
>Translated_168_residues MAKYPLEPVLAIKKDRVDRAEKVVKEKRRLLEIEQEKLREKEAERDKVKNHYMQKIQQLRDLLDEGTTSDAVLQIKSYIK VVAVQLSEEEEKVNKQKEVVLAASKELEKAEVNLAKRRKEEEKTRLHKEEWMKEALKEEARAEEKEQDEMGQLLFQLRQK KKRESGGS >Mature_167_residues AKYPLEPVLAIKKDRVDRAEKVVKEKRRLLEIEQEKLREKEAERDKVKNHYMQKIQQLRDLLDEGTTSDAVLQIKSYIKV VAVQLSEEEEKVNKQKEVVLAASKELEKAEVNLAKRRKEEEKTRLHKEEWMKEALKEEARAEEKEQDEMGQLLFQLRQKK KRESGGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19883; Mature: 19752
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKYPLEPVLAIKKDRVDRAEKVVKEKRRLLEIEQEKLREKEAERDKVKNHYMQKIQQLR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLDEGTTSDAVLQIKSYIKVVAVQLSEEEEKVNKQKEVVLAASKELEKAEVNLAKRRKE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEKTRLHKEEWMKEALKEEARAEEKEQDEMGQLLFQLRQKKKRESGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AKYPLEPVLAIKKDRVDRAEKVVKEKRRLLEIEQEKLREKEAERDKVKNHYMQKIQQLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLLDEGTTSDAVLQIKSYIKVVAVQLSEEEEKVNKQKEVVLAASKELEKAEVNLAKRRKE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEKTRLHKEEWMKEALKEEARAEEKEQDEMGQLLFQLRQKKKRESGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA