Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752231

GI number: 16752231

Start: 1153657

End: 1155123

Strand: Direct

Name: Not Available

Synonym: CP1062

Alternate gene names: NA

Gene position: 1153657-1155123 (Clockwise)

Preceding gene: 16752230

Following gene: 16752232

Centisome position: 93.8

GC content: 46.28

Gene sequence:

>1467_bases
ATGTCTATTTCATCTTCTTCAGGACCTGACAATCAAAAAAATATCATGTCTCAAGTTCTGACATCGACACCCCAGGGCGT
GCCCCAACAAGATAAGCTGTCTGGCAACGAAACGAAGCAAATACAGCAAACACGTCAGGGTAAAAACACTGAGATGGAAA
GCGATGCCACTATTGCTGGTGCTTCTGGAAAAGACAAAACTTCCTCGACTACAAAAACAGAAACAGCTCCACAACAGGGA
GTTGCTGCTGGGAAAGAATCCTCAGAAAGTCAAAAGGCAGGTGCTGATACTGGAGTATCAGGAGCGGCTGCTACTACAGC
ATCAAATACTGCAACAAAAATTGCTATGCAGACCTCTATTGAAGAGGCGAGCAAAAGTATGGAGTCTACCTTAGAGTCAC
TTCAAAGCCTCAGTGCCGCGCAAATGAAAGAAGTCGAAGCGGTTGTTGTTGCTGCCCTCTCAGGGAAAAGTTCGGGTTCC
GCAAAATTGGAAACACCTGAGCTCCCCAAGCCCGGGGTGACACCAAGATCAGAGGTTATCGAAATCGGACTCGCGCTTGC
TAAAGCAATTCAGACATTGGGAGAAGCCACAAAATCTGCCTTATCTAACTATGCAAGTACACAAGCACAAGCAGACCAAA
CAAATAAACTAGGTCTAGAAAAGCAAGCGATAAAAATCGATAAAGAACGAGAAGAATACCAAGAGATGAAGGCTGCCGAA
CAGAAGTCTAAAGATCTCGAAGGAACAATGGATACTGTCAATACTGTGATGATCGCGGTTTCTGTTGCCATTACAGTTAT
TTCTATTGTTGCTGCTATTTTTACATGCGGAGCTGGACTCGCTGGACTCGCTGCGGGAGCTGCTGTAGGTGCAGCGGCAG
CTGGAGGTGCAGCAGGAGCTGCTGCCGCAACCACGGTAGCAACACAAATTACAGTTCAAGCTGTTGTCCAAGCGGTGAAA
CAAGCTGTTATCACAGCTGTCAGACAAGCGATCACCGCGGCTATAAAAGCGGCTGTCAAATCTGGAATAAAAGCATTTAT
CAAAACTTTAGTCAAAGCGATTGCCAAAGCCATTTCTAAAGGAATCTCTAAGGTTTTCGCTAAGGGAACTCAAATGATTG
CGAAGAACTTCCCCAAGCTCTCGAAAGTCATCTCGTCTCTTACCAGTAAATGGGTCACGGTTGGGGTTGGGGTTGTAGTT
GCGGCGCCTGCTCTCGGTAAAGGGATTATGCAAATGCAGCTCTCGGAGATGCAACAAAACGTCGCTCAATTTCAGAAAGA
AGTCGGAAAACTGCAGGCTGCGGCTGATATGATTTCTATGTTCACTCAATTTTGGCAACAGGCAAGTAAAATTGCCTCAA
AACAAACAGGCGAGTCTAATGAAATGACTCAAAAAGCTACCAAGCTGGGCGCTCAAATCCTTAAAGCGTATGCCGCAATC
AGCGGAGCCATCGCTGGCGCAGCATAA

Upstream 100 bases:

>100_bases
AGTACACGGATTAAAAAACCTAACCACTGTAGTTAATAAACAAATGGTTAAAGGCGCTGAGTAAAGCCCTTTGCAGAATC
AAACCCCTTAGGATACAAAC

Downstream 100 bases:

>100_bases
AACCAATAATTTTTAAAGGAGCATGTATTGCTATGACATCAGGAGTTAGTGGAAGTTCAAGTCAGGATCCCACATTGGCT
GCGCAATTGGCACAATCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MSISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAGASGKDKTSSTTKTETAPQQG
VAAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSIEEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGS
AKLETPELPKPGVTPRSEVIEIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAE
QKSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGAAAATTVATQITVQAVVQAVK
QAVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISKGISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVV
AAPALGKGIMQMQLSEMQQNVAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAI
SGAIAGAA

Sequences:

>Translated_488_residues
MSISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAGASGKDKTSSTTKTETAPQQG
VAAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSIEEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGS
AKLETPELPKPGVTPRSEVIEIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAE
QKSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGAAAATTVATQITVQAVVQAVK
QAVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISKGISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVV
AAPALGKGIMQMQLSEMQQNVAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAI
SGAIAGAA
>Mature_487_residues
SISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAGASGKDKTSSTTKTETAPQQGV
AAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSIEEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGSA
KLETPELPKPGVTPRSEVIEIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAEQ
KSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGAAAATTVATQITVQAVVQAVKQ
AVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISKGISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVVA
APALGKGIMQMQLSEMQQNVAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAIS
GAIAGAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49819; Mature: 49688

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00501 SPASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAG
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEC
ASGKDKTSSTTKTETAPQQGVAAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSI
CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHH
EEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGSAKLETPELPKPGVTPRSEVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
EIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QKSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
AAATTVATQITVQAVVQAVKQAVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVVAAPALGKGIMQMQLSEMQQN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SGAIAGAA
HHHHHCCC
>Mature Secondary Structure 
SISSSSGPDNQKNIMSQVLTSTPQGVPQQDKLSGNETKQIQQTRQGKNTEMESDATIAG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCEEC
ASGKDKTSSTTKTETAPQQGVAAGKESSESQKAGADTGVSGAAATTASNTATKIAMQTSI
CCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHH
EEASKSMESTLESLQSLSAAQMKEVEAVVVAALSGKSSGSAKLETPELPKPGVTPRSEVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHH
EIGLALAKAIQTLGEATKSALSNYASTQAQADQTNKLGLEKQAIKIDKEREEYQEMKAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QKSKDLEGTMDTVNTVMIAVSVAITVISIVAAIFTCGAGLAGLAAGAAVGAAAAGGAAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHH
AAATTVATQITVQAVVQAVKQAVITAVRQAITAAIKAAVKSGIKAFIKTLVKAIAKAISK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GISKVFAKGTQMIAKNFPKLSKVISSLTSKWVTVGVGVVVAAPALGKGIMQMQLSEMQQN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAQFQKEVGKLQAAADMISMFTQFWQQASKIASKQTGESNEMTQKATKLGAQILKAYAAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
SGAIAGAA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA