Click here to switch to the map view.

The map label for this gene is yhbA [H]

Identifier: 167040827

GI number: 167040827

Start: 2206748

End: 2207449

Strand: Reverse

Name: yhbA [H]

Synonym: Teth514_2204

Alternate gene names: 167040827

Gene position: 2207449-2206748 (Counterclockwise)

Preceding gene: 167040830

Following gene: 167040826

Centisome position: 89.83

GC content: 38.75

Gene sequence:

>702_bases
ATGGAGAAACAAAAAATTTTAGAGCAAAAAATAAGGGAATGGGGAGCGTCTTTAGTAGGTTTTTCAAATCTTACAGGTAT
CCTTCCCGATACTCTTTCAGATATTCCGTATGCCATTACAGTTGTAATAAAATTAGCGGATAGAATAGTGGATGAAATTG
AGAATAAGCCTACTCACACTTATTATCACCATTACCGTTCTGTAAATACGCTAATTGACCAGATAACCTTAAGGACGGGT
CTTCTTCTTGAAGAATGGGGCTATAAAGCATTAGCTGTTCCTGCGTCTCAATCGATTGCTGATTTGGGAGAATATAGAGG
ACTTTTTCCACATAAAACTGCTGCTACAAGAGCAGGGCTTGGTTGGATAGGGAAAAATGGGCTTCTTGTGACTGAAAAAT
ATGGACCAAGAGTGAGATTAGGAACAGTTCTAACAAATATGCCTTTTGAAACCGGAACCCCCATTACTGAAAGTAAATGT
GGCAGCTGTAAATTATGTGTAGATGCCTGTCCTGCTATGGCACTTTATGGTACTCTATGGAAAGAGGGAATGCCGAGAGA
AGAAATAGTTGACGCAAGAGCTTGCAGTGAATACATGAATAAAAAATTTAAACACATTGGAAGAGGCTATGTCTGCGGTA
TTTGTATGGAAGTGTGTCCTTACGGAAGGAAAAAATCTGTTGACAGGTTAAAAGGTTTTTGA

Upstream 100 bases:

>100_bases
GTAGGTGGATAAAAAATATACTTTGAAAAATTTTAAAAAAATATATTTTGTTGTGCTAAAATATTTATATGCAAAAATTT
TACTAAAAGGGTTGATAGAG

Downstream 100 bases:

>100_bases
TAAAATGAAATCAAACAACCAAAACGTTTTGGAAAAGGTGGATATTAAATGGCTGTTACAATAAAAGATATAGCGAAATA
TGCGGGTGTATCTGTTACAA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MEKQKILEQKIREWGASLVGFSNLTGILPDTLSDIPYAITVVIKLADRIVDEIENKPTHTYYHHYRSVNTLIDQITLRTG
LLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGLGWIGKNGLLVTEKYGPRVRLGTVLTNMPFETGTPITESKC
GSCKLCVDACPAMALYGTLWKEGMPREEIVDARACSEYMNKKFKHIGRGYVCGICMEVCPYGRKKSVDRLKGF

Sequences:

>Translated_233_residues
MEKQKILEQKIREWGASLVGFSNLTGILPDTLSDIPYAITVVIKLADRIVDEIENKPTHTYYHHYRSVNTLIDQITLRTG
LLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGLGWIGKNGLLVTEKYGPRVRLGTVLTNMPFETGTPITESKC
GSCKLCVDACPAMALYGTLWKEGMPREEIVDARACSEYMNKKFKHIGRGYVCGICMEVCPYGRKKSVDRLKGF
>Mature_233_residues
MEKQKILEQKIREWGASLVGFSNLTGILPDTLSDIPYAITVVIKLADRIVDEIENKPTHTYYHHYRSVNTLIDQITLRTG
LLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGLGWIGKNGLLVTEKYGPRVRLGTVLTNMPFETGTPITESKC
GSCKLCVDACPAMALYGTLWKEGMPREEIVDARACSEYMNKKFKHIGRGYVCGICMEVCPYGRKKSVDRLKGF

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=132, Percent_Identity=28.030303030303, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 26009; Mature: 26009

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQKILEQKIREWGASLVGFSNLTGILPDTLSDIPYAITVVIKLADRIVDEIENKPTHT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
YYHHYRSVNTLIDQITLRTGLLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCC
GWIGKNGLLVTEKYGPRVRLGTVLTNMPFETGTPITESKCGSCKLCVDACPAMALYGTLW
CEECCCCEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KEGMPREEIVDARACSEYMNKKFKHIGRGYVCGICMEVCPYGRKKSVDRLKGF
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCC
>Mature Secondary Structure
MEKQKILEQKIREWGASLVGFSNLTGILPDTLSDIPYAITVVIKLADRIVDEIENKPTHT
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
YYHHYRSVNTLIDQITLRTGLLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCC
GWIGKNGLLVTEKYGPRVRLGTVLTNMPFETGTPITESKCGSCKLCVDACPAMALYGTLW
CEECCCCEEEEECCCCCEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
KEGMPREEIVDARACSEYMNKKFKHIGRGYVCGICMEVCPYGRKKSVDRLKGF
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]