| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is pspC [C]
Identifier: 167040780
GI number: 167040780
Start: 2162002
End: 2162418
Strand: Reverse
Name: pspC [C]
Synonym: Teth514_2157
Alternate gene names: 167040780
Gene position: 2162418-2162002 (Counterclockwise)
Preceding gene: 167040781
Following gene: 167040779
Centisome position: 88.0
GC content: 34.29
Gene sequence:
>417_bases ATGAGTGGAAAATTGTACAGGTCTAGGGTGGAAAAAATGGTAGGAGGAGTCTGTGGAGGAATAGCGGAGTATTTGGACAT TGACGTGACTTTAGTAAGAATTATTTGCCTTTTAGCGATATTTAGTGGTATTGGACTGATTCCGTATATCATTGCTTGGA TATTAATACCGGAAAATCCTTATCAATTAAAAGGAAAAATTGTAGAAGAAGAGCCTAAAGCCGAAGAACACCAACAAGAT AGTACGGTAGAAGCAGAAGATAAATCTAACAAAGTAAACGAAGTTTTAGGTTGGGCTTTAGTGATTTTTGGAGCATTGCT TTTGCTAGATAGATTATTACCTTGGTTGAGTTTTAAAATTATTTGGCCTGTTTTGCTGATTATAATTGGTTTAGGGATTT TATTAAAAAAAACATAG
Upstream 100 bases:
>100_bases GGCGATTTTAATCTTAATTTTTACGAGTAAGTTTTTCTATTTATTTCCTTTGAATTTTATTGATTTATGATAAGTAGAGT ATTAGATTGGAGGTCACAAT
Downstream 100 bases:
>100_bases GGAGCATGTGCTCCCTAATTTCCTTTAGTTATGTCTTTGTGACAGTGAATAAAAAACTTGTGACAATTTCCTACATTTTG TTTTTGAGTTTAATCTATAT
Product: phage shock protein PspC
Products: NA
Alternate protein names: Stress-Responsive Transcriptional Regulator; Phage Shock Protein C
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MSGKLYRSRVEKMVGGVCGGIAEYLDIDVTLVRIICLLAIFSGIGLIPYIIAWILIPENPYQLKGKIVEEEPKAEEHQQD STVEAEDKSNKVNEVLGWALVIFGALLLLDRLLPWLSFKIIWPVLLIIIGLGILLKKT
Sequences:
>Translated_138_residues MSGKLYRSRVEKMVGGVCGGIAEYLDIDVTLVRIICLLAIFSGIGLIPYIIAWILIPENPYQLKGKIVEEEPKAEEHQQD STVEAEDKSNKVNEVLGWALVIFGALLLLDRLLPWLSFKIIWPVLLIIIGLGILLKKT >Mature_137_residues SGKLYRSRVEKMVGGVCGGIAEYLDIDVTLVRIICLLAIFSGIGLIPYIIAWILIPENPYQLKGKIVEEEPKAEEHQQDS TVEAEDKSNKVNEVLGWALVIFGALLLLDRLLPWLSFKIIWPVLLIIIGLGILLKKT
Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspc Is Involved In Transcription Regulation. [C]
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15413; Mature: 15282
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKLYRSRVEKMVGGVCGGIAEYLDIDVTLVRIICLLAIFSGIGLIPYIIAWILIPENP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC YQLKGKIVEEEPKAEEHQQDSTVEAEDKSNKVNEVLGWALVIFGALLLLDRLLPWLSFKI HHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWPVLLIIIGLGILLKKT HHHHHHHHHHHHHHHCCC >Mature Secondary Structure SGKLYRSRVEKMVGGVCGGIAEYLDIDVTLVRIICLLAIFSGIGLIPYIIAWILIPENP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC YQLKGKIVEEEPKAEEHQQDSTVEAEDKSNKVNEVLGWALVIFGALLLLDRLLPWLSFKI HHHCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IWPVLLIIIGLGILLKKT HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA