| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is gltX [H]
Identifier: 167040725
GI number: 167040725
Start: 2110499
End: 2111938
Strand: Reverse
Name: gltX [H]
Synonym: Teth514_2102
Alternate gene names: 167040725
Gene position: 2111938-2110499 (Counterclockwise)
Preceding gene: 167040727
Following gene: 167040724
Centisome position: 85.95
GC content: 34.86
Gene sequence:
>1440_bases ATGAGTGAAGTGAGAGTAAGATTTGCCCCAAGTCCTACAGGGAGTTTACATATAGGTGGTGCCAGGACTGCTCTTTTTAA TTGGCTTTTTGCAAGGCACAATGGAGGAAAATTTATTTTAAGGGTGGATGACACTGACCTACAAAGGTCGACAGAAGAAT CTATGAAAGGGATACTTGAAGGACTGAAGTGGTTAGGTATTGATTGGGATGAAGGACCTATTTACCAATCGCAAAGGTTA GAAGAATATAGAAAATTCGCAAATAAATTATTAAAGGAAGGAAAGGCTTACTACTGTTTTTGCACAAAAGAAGAGTTAGA GGAAATGAGAAAACAGGCAGAAAAAGAAGGTAGGCCTCCAATGTATACGGGAAAATGTAGAAATTTGACCAAAGAGCAAA TAGAGGAGTATTTAAGGCAAGGGAAAAAACCTGTAATAAGATTAAAAGTGCCTCAACAAGGGAAGACAGTGGTTCACGAC ATAATAAGAGGGGATGTAGAGTTTGATAATTCCACCTTTGATGACTTTATAATTATGAAATCAGACAATATGCCTACTTA TAATTTTGCTACTGTGGTAGATGATTACCAAATGGGGATAACACATGTTATACGGGCAGAGGAACATTTGTCAAATACCC CAAAGCAAATACTAATTTTTGAAGCTTTAGGCTTAGAAATTCCTCAATTTGCCCATGTGTCTATGGTTTTAGCCCCTGAT AGAAGTAAACTTAGTAAAAGACATGGAGCGACTTCTGTGCAGGAGTTTAGAGACCAAGGATATCTTCCTGAAGCAATTGT AAATTATATAACATTGCTGGGATGGATTCCAAAAGATGGGGAAGAAATTTTTGATGTGTCAAAAAGCATAAAAGAATTTA CTTTAGAAAGGGTATCAAAAAATCCAGCTATTTACGATGTACAAAAGCTGACGTGGATAAACGGCCATTACATAAGGAAT TATGATTTAGATAAATTAACTGAAGTTGTCATTCCATTTTTGAAAGCTAAAAACTTTATTGGGGAAGATTTCGATTATGA TTATATCAAAAAAATAGTAAGTGTAGTAAGAGAAAGGGAAAAAACTCTTGTGGATGTAGCTGATGCCATGAGCTATTATT TTACAGAAGTTAACGAATATGAGGAAAAAGGAGTTAAAAAGTATTTTACTAAAGAAAAAGTTGTGGATATCCTAAAAAAA GCAGTAGTGACTTTAAAAGAAGTCGAGCCTTTTAATAAATTTACAACTGAGGAAACGTATCGCAAACTTGTGGAGGAATT ACAAATATCCAGTGGTGAACTTTTCCATCCCACGAGATTAGCTATTTCAGGTAGAACTTTTGGACCAGGACTATTTGACA TAATGGAACTTTTGGGAAAAGAAAGAACTATAAAGAGAATTGAGAAAGCCATAGATTTTATTCAAAAGATGAGGAAATAA
Upstream 100 bases:
>100_bases ATGATTATACCACAAATTTTTGATGAAATACTTCTTTGTTGAAAAAACACTTCAATTAAAGTATAATCAAAATAGTTTAA ACTTATGAAGAGGTGATAAG
Downstream 100 bases:
>100_bases CAAAAATATTGACATAGTGTATAATTTTTACTACTATGATAATAGTATTACCCTTATAAGGGTGATACTATTATTTTAAC CCATGAAAGGGTGATACCAC
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase 2; GluRS 2 [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSEVRVRFAPSPTGSLHIGGARTALFNWLFARHNGGKFILRVDDTDLQRSTEESMKGILEGLKWLGIDWDEGPIYQSQRL EEYRKFANKLLKEGKAYYCFCTKEELEEMRKQAEKEGRPPMYTGKCRNLTKEQIEEYLRQGKKPVIRLKVPQQGKTVVHD IIRGDVEFDNSTFDDFIIMKSDNMPTYNFATVVDDYQMGITHVIRAEEHLSNTPKQILIFEALGLEIPQFAHVSMVLAPD RSKLSKRHGATSVQEFRDQGYLPEAIVNYITLLGWIPKDGEEIFDVSKSIKEFTLERVSKNPAIYDVQKLTWINGHYIRN YDLDKLTEVVIPFLKAKNFIGEDFDYDYIKKIVSVVREREKTLVDVADAMSYYFTEVNEYEEKGVKKYFTKEKVVDILKK AVVTLKEVEPFNKFTTEETYRKLVEELQISSGELFHPTRLAISGRTFGPGLFDIMELLGKERTIKRIEKAIDFIQKMRK
Sequences:
>Translated_479_residues MSEVRVRFAPSPTGSLHIGGARTALFNWLFARHNGGKFILRVDDTDLQRSTEESMKGILEGLKWLGIDWDEGPIYQSQRL EEYRKFANKLLKEGKAYYCFCTKEELEEMRKQAEKEGRPPMYTGKCRNLTKEQIEEYLRQGKKPVIRLKVPQQGKTVVHD IIRGDVEFDNSTFDDFIIMKSDNMPTYNFATVVDDYQMGITHVIRAEEHLSNTPKQILIFEALGLEIPQFAHVSMVLAPD RSKLSKRHGATSVQEFRDQGYLPEAIVNYITLLGWIPKDGEEIFDVSKSIKEFTLERVSKNPAIYDVQKLTWINGHYIRN YDLDKLTEVVIPFLKAKNFIGEDFDYDYIKKIVSVVREREKTLVDVADAMSYYFTEVNEYEEKGVKKYFTKEKVVDILKK AVVTLKEVEPFNKFTTEETYRKLVEELQISSGELFHPTRLAISGRTFGPGLFDIMELLGKERTIKRIEKAIDFIQKMRK >Mature_478_residues SEVRVRFAPSPTGSLHIGGARTALFNWLFARHNGGKFILRVDDTDLQRSTEESMKGILEGLKWLGIDWDEGPIYQSQRLE EYRKFANKLLKEGKAYYCFCTKEELEEMRKQAEKEGRPPMYTGKCRNLTKEQIEEYLRQGKKPVIRLKVPQQGKTVVHDI IRGDVEFDNSTFDDFIIMKSDNMPTYNFATVVDDYQMGITHVIRAEEHLSNTPKQILIFEALGLEIPQFAHVSMVLAPDR SKLSKRHGATSVQEFRDQGYLPEAIVNYITLLGWIPKDGEEIFDVSKSIKEFTLERVSKNPAIYDVQKLTWINGHYIRNY DLDKLTEVVIPFLKAKNFIGEDFDYDYIKKIVSVVREREKTLVDVADAMSYYFTEVNEYEEKGVKKYFTKEKVVDILKKA VVTLKEVEPFNKFTTEETYRKLVEELQISSGELFHPTRLAISGRTFGPGLFDIMELLGKERTIKRIEKAIDFIQKMRK
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=490, Percent_Identity=33.469387755102, Blast_Score=265, Evalue=7e-71, Organism=Homo sapiens, GI62241042, Length=253, Percent_Identity=31.2252964426877, Blast_Score=92, Evalue=8e-19, Organism=Homo sapiens, GI4826960, Length=296, Percent_Identity=26.6891891891892, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1788743, Length=477, Percent_Identity=40.461215932914, Blast_Score=400, Evalue=1e-113, Organism=Escherichia coli, GI226510925, Length=248, Percent_Identity=32.6612903225806, Blast_Score=142, Evalue=6e-35, Organism=Escherichia coli, GI1786895, Length=335, Percent_Identity=23.5820895522388, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71993394, Length=482, Percent_Identity=34.0248962655602, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI17511007, Length=282, Percent_Identity=27.6595744680851, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17543332, Length=233, Percent_Identity=26.6094420600858, Blast_Score=66, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324540, Length=509, Percent_Identity=34.7740667976424, Blast_Score=291, Evalue=1e-79, Organism=Saccharomyces cerevisiae, GI6321192, Length=253, Percent_Identity=31.6205533596838, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324742, Length=310, Percent_Identity=28.7096774193548, Blast_Score=94, Evalue=4e-20, Organism=Drosophila melanogaster, GI24665321, Length=494, Percent_Identity=34.0080971659919, Blast_Score=284, Evalue=1e-76, Organism=Drosophila melanogaster, GI17864488, Length=308, Percent_Identity=26.9480519480519, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24649466, Length=262, Percent_Identity=27.0992366412214, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 55662; Mature: 55530
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00050 RIBOSOMAL_L23 ; PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVRVRFAPSPTGSLHIGGARTALFNWLFARHNGGKFILRVDDTDLQRSTEESMKGILE CCCCEEEECCCCCCCEEECHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHH GLKWLGIDWDEGPIYQSQRLEEYRKFANKLLKEGKAYYCFCTKEELEEMRKQAEKEGRPP HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCC MYTGKCRNLTKEQIEEYLRQGKKPVIRLKVPQQGKTVVHDIIRGDVEFDNSTFDDFIIMK CCCCHHHCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE SDNMPTYNFATVVDDYQMGITHVIRAEEHLSNTPKQILIFEALGLEIPQFAHVSMVLAPD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHCCCCCCHHCEEEEECCC RSKLSKRHGATSVQEFRDQGYLPEAIVNYITLLGWIPKDGEEIFDVSKSIKEFTLERVSK HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC NPAIYDVQKLTWINGHYIRNYDLDKLTEVVIPFLKAKNFIGEDFDYDYIKKIVSVVRERE CCCEEEHHHEEEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH KTLVDVADAMSYYFTEVNEYEEKGVKKYFTKEKVVDILKKAVVTLKEVEPFNKFTTEETY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHH RKLVEELQISSGELFHPTRLAISGRTFGPGLFDIMELLGKERTIKRIEKAIDFIQKMRK HHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEVRVRFAPSPTGSLHIGGARTALFNWLFARHNGGKFILRVDDTDLQRSTEESMKGILE CCCEEEECCCCCCCEEECHHHHHHHHHHHHEECCCEEEEEECCCHHHHHHHHHHHHHHH GLKWLGIDWDEGPIYQSQRLEEYRKFANKLLKEGKAYYCFCTKEELEEMRKQAEKEGRPP HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHCCCCC MYTGKCRNLTKEQIEEYLRQGKKPVIRLKVPQQGKTVVHDIIRGDVEFDNSTFDDFIIMK CCCCHHHCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEEEE SDNMPTYNFATVVDDYQMGITHVIRAEEHLSNTPKQILIFEALGLEIPQFAHVSMVLAPD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHCCCCCCHHCEEEEECCC RSKLSKRHGATSVQEFRDQGYLPEAIVNYITLLGWIPKDGEEIFDVSKSIKEFTLERVSK HHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC NPAIYDVQKLTWINGHYIRNYDLDKLTEVVIPFLKAKNFIGEDFDYDYIKKIVSVVRERE CCCEEEHHHEEEECCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH KTLVDVADAMSYYFTEVNEYEEKGVKKYFTKEKVVDILKKAVVTLKEVEPFNKFTTEETY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHH RKLVEELQISSGELFHPTRLAISGRTFGPGLFDIMELLGKERTIKRIEKAIDFIQKMRK HHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA