| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is pyrR
Identifier: 167040452
GI number: 167040452
Start: 1829512
End: 1830048
Strand: Reverse
Name: pyrR
Synonym: Teth514_1819
Alternate gene names: 167040452
Gene position: 1830048-1829512 (Counterclockwise)
Preceding gene: 167040454
Following gene: 167040451
Centisome position: 74.48
GC content: 38.73
Gene sequence:
>537_bases TTGAAGATAAAAGCAGAGATAATGGATGAAAAAGCTATAGACAGAGCGCTCATACGAATAGCCCATGAAATTGTGGAAAG GAATAAAGGCATTGAAGATGTGGTTTTGGTAGGTATTAAGACAAGAGGAGTGCCTTTAGCAGAAAGGATAGCGAAGTATA TATCGCGAATTGAAGGGAAAAAGCCTCCAGTAGGGTCGCTGGATATCACCTTATATCGCGATGACCTCACGACAGACCTT GAACAGCCTTTAGTGAAGAAAAAAGATATAGGTGTAGATGTAGTAGGTAAAATAGTGGTATTAGTGGATGACGTGATATA CACAGGAAGGACTATAAGGGCTGCTATGGATGCAATTATCGACTTAGGAAGACCTAAAGCGATACAGCTGGCAGAACTAA TTGACAGAGGGCATAGGGAATTGCCTATAAAGCCAGATTATGTAGGTAAAAATGTTCCAACATCAAAAAATGAAATAGTA AATGTAATGTTGGAGGAAGTAGACAAAGTAAACAGAGTTGTAATAACTGAAAAGTAG
Upstream 100 bases:
>100_bases AAAGTTCTTTAAGCAGTCCTGTGAGGCTGGCAAGGTTACCATAATGTAGCATAAAAAACTTCTTGTCAGTGCAAGAAGTT TTTTTGTGGAGGTTGTGAAG
Downstream 100 bases:
>100_bases CACCTTTAATTTAGCCCAGCGAGGCTAAAAAGGGAGAATGATAGATATTCTCCCGGAGTATTAAACTCTAAAAAGGGAGG ATTTTTTATGCCAAAATTCA
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKIKAEIMDEKAIDRALIRIAHEIVERNKGIEDVVLVGIKTRGVPLAERIAKYISRIEGKKPPVGSLDITLYRDDLTTDL EQPLVKKKDIGVDVVGKIVVLVDDVIYTGRTIRAAMDAIIDLGRPKAIQLAELIDRGHRELPIKPDYVGKNVPTSKNEIV NVMLEEVDKVNRVVITEK
Sequences:
>Translated_178_residues MKIKAEIMDEKAIDRALIRIAHEIVERNKGIEDVVLVGIKTRGVPLAERIAKYISRIEGKKPPVGSLDITLYRDDLTTDL EQPLVKKKDIGVDVVGKIVVLVDDVIYTGRTIRAAMDAIIDLGRPKAIQLAELIDRGHRELPIKPDYVGKNVPTSKNEIV NVMLEEVDKVNRVVITEK >Mature_178_residues MKIKAEIMDEKAIDRALIRIAHEIVERNKGIEDVVLVGIKTRGVPLAERIAKYISRIEGKKPPVGSLDITLYRDDLTTDL EQPLVKKKDIGVDVVGKIVVLVDDVIYTGRTIRAAMDAIIDLGRPKAIQLAELIDRGHRELPIKPDYVGKNVPTSKNEIV NVMLEEVDKVNRVVITEK
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PYRR_THEP3 (B0KA38)
Other databases:
- EMBL: CP000924 - RefSeq: YP_001665337.1 - ProteinModelPortal: B0KA38 - SMR: B0KA38 - GeneID: 5875049 - GenomeReviews: CP000924_GR - KEGG: tpd:Teth39_1347 - HOGENOM: HBG641958 - OMA: ILDITLY - ProtClustDB: PRK05205 - BioCyc: TPSE340099:TETH39_1347-MONOMER - HAMAP: MF_01219 - InterPro: IPR000836 - InterPro: IPR023050
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.9
Molecular weight: Translated: 19908; Mature: 19908
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKAEIMDEKAIDRALIRIAHEIVERNKGIEDVVLVGIKTRGVPLAERIAKYISRIEGK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC KPPVGSLDITLYRDDLTTDLEQPLVKKKDIGVDVVGKIVVLVDDVIYTGRTIRAAMDAII CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DLGRPKAIQLAELIDRGHRELPIKPDYVGKNVPTSKNEIVNVMLEEVDKVNRVVITEK HCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECC >Mature Secondary Structure MKIKAEIMDEKAIDRALIRIAHEIVERNKGIEDVVLVGIKTRGVPLAERIAKYISRIEGK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCC KPPVGSLDITLYRDDLTTDLEQPLVKKKDIGVDVVGKIVVLVDDVIYTGRTIRAAMDAII CCCCCCEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH DLGRPKAIQLAELIDRGHRELPIKPDYVGKNVPTSKNEIVNVMLEEVDKVNRVVITEK HCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA