| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167040424
Identifier: 167040424
GI number: 167040424
Start: 1798080
End: 1798970
Strand: Reverse
Name: 167040424
Synonym: Teth514_1788
Alternate gene names: NA
Gene position: 1798970-1798080 (Counterclockwise)
Preceding gene: 167040425
Following gene: 167040423
Centisome position: 73.21
GC content: 36.92
Gene sequence:
>891_bases GTGATAAAATTAAAGAGATTATCAGATAAGCCGGTATTGATGCCAAAAGCAGAAAATGAATGGGAAAGAGCAGCAGTTTT TAACACTGCAGCAATTTATGACAATGGACTGTTTCACTTGATTTACAGAGCTACTGACATTGGACCTCACGCCAAATATG GGAAATATATTTCTCGCTTGGGATATGCAGTTAGCAAAGACGGAATTAATTTTATGAGATTAGACAAACCAGTGATGAGC AATGAGACAGAACAAGAGCTCAGAGGATTAGAAGACCCAAGGATAGTCAAAATTGACGGCATTTATTATATGATGTACAC AGGTTTTGGAGACAGATTTCAAGATGACTATAGGATCTGTTTGGCTACCTCCAAAAACCTTATAGATTGGGAGAGAAAAG GAGTAGTTTTAGATGAACCTAATAAAGACGCCTCTTTATTTCCTGAAAAAATTAATGGTAAATATGTGATGTTGCACAGG AGATATCCCGACATTTGGATAGCATTTTCTGATGATTTAAAAAATTGGTACGACCATAAACCAATACTAAAACCTATTCC AAATACATGGGAGAGTGCGAGAGTAGGAATTGGAGGGCCTCCTATTAAGACAAAGGACGGTTGGTTTTTGATATACCATG CAGCTGATGACAATAATGTGTATAGATTGGGAGCAGTCCTTTTAGATTTAGAAGATCCATCAAAGGTTATTGCAAGGCAA AAAGAACCTATCTTAGAGCCAGAACTGGGTTGGGAAAAAGAAGGATATATCCCTAATGTTGTATTTAGTTGTGGTAATGC AGTAAAAGATGATACTATTTACGTTTATTATGGGGGCGCGGATACTGTTATAGGCGTGGCGATATTAGAGATGAAAGATA TCAAATTTTAG
Upstream 100 bases:
>100_bases TGAATGACATGTATTATGTGTATTATGGAGCAGCAGATACCCATATAGGTGTAGCAGTCATTGAAAAAGAAAAAGTAAAA TTTTAAAAGGAGTGTATGGA
Downstream 100 bases:
>100_bases CAGGCTTTTAAAAGGCCTGTTTTTTATTTACAGAAAAGTACTTGACATACCAAAAAGGATTAATTATAATACTTATTAGC AGCCGAATTTCAAGAGTGCT
Product: glycosidase, PH1107-related
Products: NA
Alternate protein names: Glycosidase Related Protein; Glycosylase; Glycosidase-Like Protein; Conserved Domain Protein; Glycosidase-Related; Glycosidase-Related Protein; Cytoplasmic Protein; Glycosylase-Like Protein; Unknwon Conserved Protein
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MIKLKRLSDKPVLMPKAENEWERAAVFNTAAIYDNGLFHLIYRATDIGPHAKYGKYISRLGYAVSKDGINFMRLDKPVMS NETEQELRGLEDPRIVKIDGIYYMMYTGFGDRFQDDYRICLATSKNLIDWERKGVVLDEPNKDASLFPEKINGKYVMLHR RYPDIWIAFSDDLKNWYDHKPILKPIPNTWESARVGIGGPPIKTKDGWFLIYHAADDNNVYRLGAVLLDLEDPSKVIARQ KEPILEPELGWEKEGYIPNVVFSCGNAVKDDTIYVYYGGADTVIGVAILEMKDIKF
Sequences:
>Translated_296_residues MIKLKRLSDKPVLMPKAENEWERAAVFNTAAIYDNGLFHLIYRATDIGPHAKYGKYISRLGYAVSKDGINFMRLDKPVMS NETEQELRGLEDPRIVKIDGIYYMMYTGFGDRFQDDYRICLATSKNLIDWERKGVVLDEPNKDASLFPEKINGKYVMLHR RYPDIWIAFSDDLKNWYDHKPILKPIPNTWESARVGIGGPPIKTKDGWFLIYHAADDNNVYRLGAVLLDLEDPSKVIARQ KEPILEPELGWEKEGYIPNVVFSCGNAVKDDTIYVYYGGADTVIGVAILEMKDIKF >Mature_296_residues MIKLKRLSDKPVLMPKAENEWERAAVFNTAAIYDNGLFHLIYRATDIGPHAKYGKYISRLGYAVSKDGINFMRLDKPVMS NETEQELRGLEDPRIVKIDGIYYMMYTGFGDRFQDDYRICLATSKNLIDWERKGVVLDEPNKDASLFPEKINGKYVMLHR RYPDIWIAFSDDLKNWYDHKPILKPIPNTWESARVGIGGPPIKTKDGWFLIYHAADDNNVYRLGAVLLDLEDPSKVIARQ KEPILEPELGWEKEGYIPNVVFSCGNAVKDDTIYVYYGGADTVIGVAILEMKDIKF
Specific function: Unknown
COG id: COG2152
COG function: function code G; Predicted glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33997; Mature: 33997
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKLKRLSDKPVLMPKAENEWERAAVFNTAAIYDNGLFHLIYRATDIGPHAKYGKYISRL CEEEECCCCCCEECCCCCCCHHHHHEEEEHHHHCCCEEEEEEEECCCCCCHHHHHHHHHH GYAVSKDGINFMRLDKPVMSNETEQELRGLEDPRIVKIDGIYYMMYTGFGDRFQDDYRIC CCEECCCCCCEEEECCCHHCCCHHHHHHCCCCCCEEEECCEEEEEEECCCCCCCCCEEEE LATSKNLIDWERKGVVLDEPNKDASLFPEKINGKYVMLHRRYPDIWIAFSDDLKNWYDHK EECCCCCCCHHHCCEEEECCCCCCCCCHHHCCCCEEEEEECCCCEEEEECHHHHHHHCCC PILKPIPNTWESARVGIGGPPIKTKDGWFLIYHAADDNNVYRLGAVLLDLEDPSKVIARQ CCCCCCCCCHHHCEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHCC KEPILEPELGWEKEGYIPNVVFSCGNAVKDDTIYVYYGGADTVIGVAILEMKDIKF CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCC >Mature Secondary Structure MIKLKRLSDKPVLMPKAENEWERAAVFNTAAIYDNGLFHLIYRATDIGPHAKYGKYISRL CEEEECCCCCCEECCCCCCCHHHHHEEEEHHHHCCCEEEEEEEECCCCCCHHHHHHHHHH GYAVSKDGINFMRLDKPVMSNETEQELRGLEDPRIVKIDGIYYMMYTGFGDRFQDDYRIC CCEECCCCCCEEEECCCHHCCCHHHHHHCCCCCCEEEECCEEEEEEECCCCCCCCCEEEE LATSKNLIDWERKGVVLDEPNKDASLFPEKINGKYVMLHRRYPDIWIAFSDDLKNWYDHK EECCCCCCCHHHCCEEEECCCCCCCCCHHHCCCCEEEEEECCCCEEEEECHHHHHHHCCC PILKPIPNTWESARVGIGGPPIKTKDGWFLIYHAADDNNVYRLGAVLLDLEDPSKVIARQ CCCCCCCCCHHHCEECCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHCC KEPILEPELGWEKEGYIPNVVFSCGNAVKDDTIYVYYGGADTVIGVAILEMKDIKF CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA