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The map label for this gene is rpe [H]

Identifier: 167040384

GI number: 167040384

Start: 1750494

End: 1751144

Strand: Reverse

Name: rpe [H]

Synonym: Teth514_1747

Alternate gene names: 167040384

Gene position: 1751144-1750494 (Counterclockwise)

Preceding gene: 167040385

Following gene: 167040383

Centisome position: 71.26

GC content: 32.57

Gene sequence:

>651_bases
TTGAAAATAGCTCCTTCAATATTATCTGCAAATTTTGCGAATTTATTAGAGGATATAAAAAAGATAGAAAAAGATGCTGA
CCTTTTACATATTGATGTGATGGATGGCCATTTTGTTCCAAATATTACTATTGGACCAGTAGTTGTAAAGTCCCTTAGAA
AATTTTTTTCTCTTCCTTTTGATGTCCATTTGATGATTGAAAATCCGGATTTGTACATAGAGGAGTTTGCAAATTCAGGA
GCGGATATTATAACTGTCCACCAAGAGGCTTGTATACACTTGCATAGGACAATACAAAAAATAAAAGGCTACGGCAAAAA
AGCTGGGGTTTCTTTAAATCCAGCCACACCTTTAGAAACTTTAAAATATATATTACAGGATGTTGACATGATTTTGATTA
TGACAGTAAATCCTGGATTTGGAGGACAAAAGTTTATAGATTCAATGCTTAAAAAGATTGAAGAATTAAAGAAAATGAGA
GAAGATTTAGGCTTAAACTTTGAAATTGAGGTAGACGGTGGAATTAACCTTTATAATGTAAAGGAAGTGGTTGAGGCAGG
AGCTGATATAATTGTAGCTGGTTCTGCAATTTTTGAGTCTTCAAATCCTGCACAAACTATAAAAGAATTTAGAAAGGCAG
TAGAAAAATGA

Upstream 100 bases:

>100_bases
AAAGGCTGTGAAAGAAGGGCTAATAGATAAAAACAGGTATTTGAGTTATCTTTCTCTGCTTAAAGAATTAAAGGAAAAAG
AGAAGAGGAGGTACTAAAAA

Downstream 100 bases:

>100_bases
AGGTCTTAATTATTTCTAATGGGGATATAAAAGATTATAATTTTTATAAAAAGCTGATAAAAGATGCAGATATGGTTATA
TGTGCAGATGGTGGAGCAAA

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKIAPSILSANFANLLEDIKKIEKDADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLPFDVHLMIENPDLYIEEFANSG
ADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLETLKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMR
EDLGLNFEIEVDGGINLYNVKEVVEAGADIIVAGSAIFESSNPAQTIKEFRKAVEK

Sequences:

>Translated_216_residues
MKIAPSILSANFANLLEDIKKIEKDADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLPFDVHLMIENPDLYIEEFANSG
ADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLETLKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMR
EDLGLNFEIEVDGGINLYNVKEVVEAGADIIVAGSAIFESSNPAQTIKEFRKAVEK
>Mature_216_residues
MKIAPSILSANFANLLEDIKKIEKDADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLPFDVHLMIENPDLYIEEFANSG
ADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLETLKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMR
EDLGLNFEIEVDGGINLYNVKEVVEAGADIIVAGSAIFESSNPAQTIKEFRKAVEK

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=218, Percent_Identity=42.6605504587156, Blast_Score=172, Evalue=2e-43,
Organism=Homo sapiens, GI219879828, Length=213, Percent_Identity=41.3145539906103, Blast_Score=159, Evalue=2e-39,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=34.5238095238095, Blast_Score=102, Evalue=3e-22,
Organism=Escherichia coli, GI1789788, Length=216, Percent_Identity=50.462962962963, Blast_Score=218, Evalue=2e-58,
Organism=Escherichia coli, GI1790523, Length=211, Percent_Identity=44.5497630331754, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1790754, Length=211, Percent_Identity=31.2796208530806, Blast_Score=109, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17552948, Length=219, Percent_Identity=41.5525114155251, Blast_Score=168, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6322341, Length=228, Percent_Identity=42.1052631578947, Blast_Score=178, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24586301, Length=215, Percent_Identity=41.8604651162791, Blast_Score=172, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 24020; Mature: 24020

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAPSILSANFANLLEDIKKIEKDADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLPF
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC
DVHLMIENPDLYIEEFANSGADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLET
EEEEEEECCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
LKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMREDLGLNFEIEVDGGINLYNV
HHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
KEVVEAGADIIVAGSAIFESSNPAQTIKEFRKAVEK
HHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIAPSILSANFANLLEDIKKIEKDADLLHIDVMDGHFVPNITIGPVVVKSLRKFFSLPF
CCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCC
DVHLMIENPDLYIEEFANSGADIITVHQEACIHLHRTIQKIKGYGKKAGVSLNPATPLET
EEEEEEECCCHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
LKYILQDVDMILIMTVNPGFGGQKFIDSMLKKIEELKKMREDLGLNFEIEVDGGINLYNV
HHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
KEVVEAGADIIVAGSAIFESSNPAQTIKEFRKAVEK
HHHHHCCCCEEEECHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]