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The map label for this gene is ycdQ [C]

Identifier: 167040288

GI number: 167040288

Start: 1670134

End: 1670754

Strand: Reverse

Name: ycdQ [C]

Synonym: Teth514_1651

Alternate gene names: 167040288

Gene position: 1670754-1670134 (Counterclockwise)

Preceding gene: 167040289

Following gene: 167040287

Centisome position: 67.99

GC content: 31.56

Gene sequence:

>621_bases
ATGATTTCTGTTGTAATCCCAGCTTTTAATGAAGGAAAAAATATTGGGAGAGTTTTGTCAGTCTTAGAAACAATAGACCT
GATTGATGAAATCATAGTTGTAAATGATGGTTCTACAGATGATACAAAAGAACAAGCTCTAAAATACAATGTGAAACTTA
TCAATTTAGAAAAAAATCAAGGGAAAGGAAAAGCGTTAAAAGCAGGAATAGATAATTCTAAAGGTGATATTATCGTTATG
TTAGATGCCGATTTAATTGGACTTACTGAAAAACATTTTGTAAATCTCGTATCTCCTGTATTAAAGAATGAAGCAGATAT
GACAATTGGAATTTTTTCTGGTGGAAGAAAATCTACAGATTTTGCACAAAAAATTGCACCTTTTTTGTCAGGCCAAAGGG
CAATAAAAAGGCAATTTTTAGAAAACATTGAAGAGATGGAAATCAGTAGATTCGGAGTGGAGATTGCTTTAAATAGACAT
GCTAAAAAGAATAAGTTAAGGGTGGTAAATGTGCCTCTTGAGAATTTGAGCCATGTCATGAAAGAAGAAAAGCTGGGATT
AATGAGAGGATTTTATGCGCGATTAAGAATGTATTTTGATATTTTAAAAATGTGGATTTAG

Upstream 100 bases:

>100_bases
TTATTTTTAAAAAAGGAAAAGTTTATAAAAAAGTTAAAGAAGAAGAGTTAGTAGAAGAATTGATGAAAGAAATTGAAAAA
TTACTTGAGGAGGATTCTTA

Downstream 100 bases:

>100_bases
AAAGAGGGATTTGATGATTCCAGCATCTTTTCCGCAGGAATTTGAAATAAAAAAAGTAAAACTGTTAAAAAAAGATAGAA
AATTAATTGTAAGCGTATCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MISVVIPAFNEGKNIGRVLSVLETIDLIDEIIVVNDGSTDDTKEQALKYNVKLINLEKNQGKGKALKAGIDNSKGDIIVM
LDADLIGLTEKHFVNLVSPVLKNEADMTIGIFSGGRKSTDFAQKIAPFLSGQRAIKRQFLENIEEMEISRFGVEIALNRH
AKKNKLRVVNVPLENLSHVMKEEKLGLMRGFYARLRMYFDILKMWI

Sequences:

>Translated_206_residues
MISVVIPAFNEGKNIGRVLSVLETIDLIDEIIVVNDGSTDDTKEQALKYNVKLINLEKNQGKGKALKAGIDNSKGDIIVM
LDADLIGLTEKHFVNLVSPVLKNEADMTIGIFSGGRKSTDFAQKIAPFLSGQRAIKRQFLENIEEMEISRFGVEIALNRH
AKKNKLRVVNVPLENLSHVMKEEKLGLMRGFYARLRMYFDILKMWI
>Mature_206_residues
MISVVIPAFNEGKNIGRVLSVLETIDLIDEIIVVNDGSTDDTKEQALKYNVKLINLEKNQGKGKALKAGIDNSKGDIIVM
LDADLIGLTEKHFVNLVSPVLKNEADMTIGIFSGGRKSTDFAQKIAPFLSGQRAIKRQFLENIEEMEISRFGVEIALNRH
AKKNKLRVVNVPLENLSHVMKEEKLGLMRGFYARLRMYFDILKMWI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Homo sapiens, GI7019323, Length=99, Percent_Identity=42.4242424242424, Blast_Score=67, Evalue=7e-12,
Organism=Escherichia coli, GI1787259, Length=109, Percent_Identity=36.697247706422, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 23188; Mature: 23188

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVVIPAFNEGKNIGRVLSVLETIDLIDEIIVVNDGSTDDTKEQALKYNVKLINLEKNQ
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCEEEEEEECCC
GKGKALKAGIDNSKGDIIVMLDADLIGLTEKHFVNLVSPVLKNEADMTIGIFSGGRKSTD
CCCCEEECCCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH
FAQKIAPFLSGQRAIKRQFLENIEEMEISRFGVEIALNRHAKKNKLRVVNVPLENLSHVM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCHHHHHHHH
KEEKLGLMRGFYARLRMYFDILKMWI
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISVVIPAFNEGKNIGRVLSVLETIDLIDEIIVVNDGSTDDTKEQALKYNVKLINLEKNQ
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHCCEEEEEEECCC
GKGKALKAGIDNSKGDIIVMLDADLIGLTEKHFVNLVSPVLKNEADMTIGIFSGGRKSTD
CCCCEEECCCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH
FAQKIAPFLSGQRAIKRQFLENIEEMEISRFGVEIALNRHAKKNKLRVVNVPLENLSHVM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCEEEEECCHHHHHHHH
KEEKLGLMRGFYARLRMYFDILKMWI
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]