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The map label for this gene is ylxY [H]

Identifier: 167040275

GI number: 167040275

Start: 1655103

End: 1655819

Strand: Reverse

Name: ylxY [H]

Synonym: Teth514_1638

Alternate gene names: 167040275

Gene position: 1655819-1655103 (Counterclockwise)

Preceding gene: 167040276

Following gene: 167040274

Centisome position: 67.38

GC content: 29.57

Gene sequence:

>717_bases
ATGAAAATATTTTATATAAAATATCCTAAAAAAAGCTTTTGGATTATTTTTTCCTTAGCAATATTACTGCTCATCTTTTT
AATTTACATAATTACACGCAGCGTTTCTGTTTTTAACAGCAATGAACCTATTTATAAAGGAGATACAAAGGAAAAAAAGA
TTGCCTTTGCTTGCAACGTTGCATGGGGAGATGAGTACATACCAAAAATGTTAGATATTTTTAAAGATAACAATATCCAT
ATTACATTTTTTTTTGAAGGAAAATGGGCAGAAAAAAATCCTGATGTTGTAAAAGATATTTATCAAAAAGGCCATGAAAT
CGGAAGTCATGGATACACACATGTAAAATATACAAATTTAAGTAGGCAACAATATGAAGAAGATATTAAAAAAAGCGGTG
AAATTTTAGAAAAAATTACAGGAACAAAGCCTACCCTTTTTGCACCACCGTATGGTGATTTCAATGATGAAGTAGTAAAA
GTAGCAGAACAATTAGGATATAAAGTTATTCTATGGAGTTTGGACACTATAGATTGGAATAATCCAAGTCCTCAAACAAT
TGTAGATAGAGTTATGACTAAATATCACAATGGTGCTATTGTGTTAATGCACCCTACTCAAAATACCGTGGAAGCATTGC
CCCAGATAATAAAACAACTTAAAGAAAAAGGTTATAAAATAACTAAAGTATCGGAAGTAATTGTAGATAACAATTAA

Upstream 100 bases:

>100_bases
GCATAAACCGACCCACGGTTTATGTTTTTTATTTTTTAGTAATATATTCGCCGCCTGTTTGAATAAAATTAAAGTGAGAA
TATCAACGGGTGGTGTTATA

Downstream 100 bases:

>100_bases
ATTTGCTATAATAATAATTAAATTTGCAAAGGAGGATAAAATGTACGAACAAAAGATTATTGAAGGAGTAAAAGTTGTAA
CTTGTAAAATTCCTCACGCA

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKIFYIKYPKKSFWIIFSLAILLLIFLIYIITRSVSVFNSNEPIYKGDTKEKKIAFACNVAWGDEYIPKMLDIFKDNNIH
ITFFFEGKWAEKNPDVVKDIYQKGHEIGSHGYTHVKYTNLSRQQYEEDIKKSGEILEKITGTKPTLFAPPYGDFNDEVVK
VAEQLGYKVILWSLDTIDWNNPSPQTIVDRVMTKYHNGAIVLMHPTQNTVEALPQIIKQLKEKGYKITKVSEVIVDNN

Sequences:

>Translated_238_residues
MKIFYIKYPKKSFWIIFSLAILLLIFLIYIITRSVSVFNSNEPIYKGDTKEKKIAFACNVAWGDEYIPKMLDIFKDNNIH
ITFFFEGKWAEKNPDVVKDIYQKGHEIGSHGYTHVKYTNLSRQQYEEDIKKSGEILEKITGTKPTLFAPPYGDFNDEVVK
VAEQLGYKVILWSLDTIDWNNPSPQTIVDRVMTKYHNGAIVLMHPTQNTVEALPQIIKQLKEKGYKITKVSEVIVDNN
>Mature_238_residues
MKIFYIKYPKKSFWIIFSLAILLLIFLIYIITRSVSVFNSNEPIYKGDTKEKKIAFACNVAWGDEYIPKMLDIFKDNNIH
ITFFFEGKWAEKNPDVVKDIYQKGHEIGSHGYTHVKYTNLSRQQYEEDIKKSGEILEKITGTKPTLFAPPYGDFNDEVVK
VAEQLGYKVILWSLDTIDWNNPSPQTIVDRVMTKYHNGAIVLMHPTQNTVEALPQIIKQLKEKGYKITKVSEVIVDNN

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323339, Length=170, Percent_Identity=30, Blast_Score=72, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6323338, Length=149, Percent_Identity=28.8590604026846, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 27589; Mature: 27589

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFYIKYPKKSFWIIFSLAILLLIFLIYIITRSVSVFNSNEPIYKGDTKEKKIAFACNV
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEE
AWGDEYIPKMLDIFKDNNIHITFFFEGKWAEKNPDVVKDIYQKGHEIGSHGYTHVKYTNL
CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCHHCCCCCCEEEEEECC
SRQQYEEDIKKSGEILEKITGTKPTLFAPPYGDFNDEVVKVAEQLGYKVILWSLDTIDWN
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCC
NPSPQTIVDRVMTKYHNGAIVLMHPTQNTVEALPQIIKQLKEKGYKITKVSEVIVDNN
CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCC
>Mature Secondary Structure
MKIFYIKYPKKSFWIIFSLAILLLIFLIYIITRSVSVFNSNEPIYKGDTKEKKIAFACNV
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEE
AWGDEYIPKMLDIFKDNNIHITFFFEGKWAEKNPDVVKDIYQKGHEIGSHGYTHVKYTNL
CCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCHHCCCCCCEEEEEECC
SRQQYEEDIKKSGEILEKITGTKPTLFAPPYGDFNDEVVKVAEQLGYKVILWSLDTIDWN
HHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCC
NPSPQTIVDRVMTKYHNGAIVLMHPTQNTVEALPQIIKQLKEKGYKITKVSEVIVDNN
CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]