| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is cinA [H]
Identifier: 167040265
GI number: 167040265
Start: 1645477
End: 1646718
Strand: Reverse
Name: cinA [H]
Synonym: Teth514_1628
Alternate gene names: 167040265
Gene position: 1646718-1645477 (Counterclockwise)
Preceding gene: 167040266
Following gene: 167040264
Centisome position: 67.01
GC content: 33.33
Gene sequence:
>1242_bases TTGAGAGGAGAAATTATTTCTGTTGGCACAGAGCTTTTATTAGGACAAATTTTAAATACTAACGCTAAATATTTATCTGA AAAATTGGCTCTTTTGGGCATAGATATATATTTCCATACTAACGTTGGAGATAATGAAGAAAGATTAAAAGAATGTTTAA ACATCGCTTTTAACCGCTCTGACCTTATAATAACAACAGGTGGATTAGGCCCTACTGTTGATGACATTACAAAAGAGACA GTGGCTTCTTTTTTAGGTCTTCCTCTTGTAGAAAATCTAGAAGCAAAAGAAGAGATAATAAGATTTTTTGAAAAAATAGG ACAAACACCTACCATGAATAACTTCAAACAAGCCTTTTTCCCAGAAGGCGCAAAAATTTTGCCAAATAAAAATGGAACAG CTCCTGGTTGTATAATAGAAAAAGATAACAAAATCATCATAATTTTGCCTGGTCCACCTTCTGAGCTAATTCCAATGTTT GAGGAATATGTATATCATTATCTTAAAAGCAAAACTAATGAAACTATAAAATCTCGAGTAATCAAAATATTTGGCTTAGG TGAATCAAAAGTAGAAGAAATGGTAAGACCCCTTTTGTTTAATTCTAATCCTACTGTTGCTCCTTTAGTAGGTGATGGAT ATGTAATTTTGAGAATAACTGCAAAAGGACATGATGACAAAGAAATTTCAGAAATGATTGAGGATATGGAATCAAGGATT AGAGGTATCATAGGTGATTATATATACGCTGTAGATGAGGAAGAAATGGAAGAAGTCGTGGTAAAATTACTACAGAAAAA CAAATTAACTCTTGCTGTCTCTGAATCTTGTACAGGTGGTTTATTGGCAAAAAAAATAACAGATGTATCAGGGGCTTCAA AAGTCTTTAATTTAGGTGTTGTTTCTTACAGTAATGAAGCTAAAGAAAACATCTTAGGGGTGAGAAAATCTACTTTAGAG TCTTATGGAGCAGTAAGCTATGAGACAGCAAAAGAAATGGCAGAAAATGTAAGAAAATTGGCCAATGCTGATTTTGGTTT GTCTACTACTGGAATTGCAGGACCTACAGGTGGAACACCTGAAAAGCCCGTAGGATTAGTGTATGTGGGTTTTGCTACCA ATGAAGAAGTCTATGTAAAAAAACTAATGTTAAGTGGTGATAGAAGTAAAATAAGAACAAGGACAGTACTACATGCTTTA GACATTGTAAGAAGATATCTTCTGGGAATAAAAATTGACTAG
Upstream 100 bases:
>100_bases ACTATAATGGTGTATATGGCTTTAATTTTAACAATTTATTCGGGTGTAGATTATATTATAAAATCTAAAAATTTATTCAA AGATTAAAGAGGTGTTTTAA
Downstream 100 bases:
>100_bases TTATGTCCATTAATATATAATTAATTTAATACAATACCCTGTATTCTTGGGAGGTAAATAATAAATGATAGAAAAACAAA AGGCTTTAGAAATGGCTATA
Product: competence damage-inducible protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MRGEIISVGTELLLGQILNTNAKYLSEKLALLGIDIYFHTNVGDNEERLKECLNIAFNRSDLIITTGGLGPTVDDITKET VASFLGLPLVENLEAKEEIIRFFEKIGQTPTMNNFKQAFFPEGAKILPNKNGTAPGCIIEKDNKIIIILPGPPSELIPMF EEYVYHYLKSKTNETIKSRVIKIFGLGESKVEEMVRPLLFNSNPTVAPLVGDGYVILRITAKGHDDKEISEMIEDMESRI RGIIGDYIYAVDEEEMEEVVVKLLQKNKLTLAVSESCTGGLLAKKITDVSGASKVFNLGVVSYSNEAKENILGVRKSTLE SYGAVSYETAKEMAENVRKLANADFGLSTTGIAGPTGGTPEKPVGLVYVGFATNEEVYVKKLMLSGDRSKIRTRTVLHAL DIVRRYLLGIKID
Sequences:
>Translated_413_residues MRGEIISVGTELLLGQILNTNAKYLSEKLALLGIDIYFHTNVGDNEERLKECLNIAFNRSDLIITTGGLGPTVDDITKET VASFLGLPLVENLEAKEEIIRFFEKIGQTPTMNNFKQAFFPEGAKILPNKNGTAPGCIIEKDNKIIIILPGPPSELIPMF EEYVYHYLKSKTNETIKSRVIKIFGLGESKVEEMVRPLLFNSNPTVAPLVGDGYVILRITAKGHDDKEISEMIEDMESRI RGIIGDYIYAVDEEEMEEVVVKLLQKNKLTLAVSESCTGGLLAKKITDVSGASKVFNLGVVSYSNEAKENILGVRKSTLE SYGAVSYETAKEMAENVRKLANADFGLSTTGIAGPTGGTPEKPVGLVYVGFATNEEVYVKKLMLSGDRSKIRTRTVLHAL DIVRRYLLGIKID >Mature_413_residues MRGEIISVGTELLLGQILNTNAKYLSEKLALLGIDIYFHTNVGDNEERLKECLNIAFNRSDLIITTGGLGPTVDDITKET VASFLGLPLVENLEAKEEIIRFFEKIGQTPTMNNFKQAFFPEGAKILPNKNGTAPGCIIEKDNKIIIILPGPPSELIPMF EEYVYHYLKSKTNETIKSRVIKIFGLGESKVEEMVRPLLFNSNPTVAPLVGDGYVILRITAKGHDDKEISEMIEDMESRI RGIIGDYIYAVDEEEMEEVVVKLLQKNKLTLAVSESCTGGLLAKKITDVSGASKVFNLGVVSYSNEAKENILGVRKSTLE SYGAVSYETAKEMAENVRKLANADFGLSTTGIAGPTGGTPEKPVGLVYVGFATNEEVYVKKLMLSGDRSKIRTRTVLHAL DIVRRYLLGIKID
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1789052, Length=155, Percent_Identity=43.8709677419355, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1788583, Length=289, Percent_Identity=26.9896193771626, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1787818, Length=140, Percent_Identity=34.2857142857143, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6323832, Length=261, Percent_Identity=22.9885057471264, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 45489; Mature: 45489
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGEIISVGTELLLGQILNTNAKYLSEKLALLGIDIYFHTNVGDNEERLKECLNIAFNRS CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCC DLIITTGGLGPTVDDITKETVASFLGLPLVENLEAKEEIIRFFEKIGQTPTMNNFKQAFF CEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHC PEGAKILPNKNGTAPGCIIEKDNKIIIILPGPPSELIPMFEEYVYHYLKSKTNETIKSRV CCCCEECCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH IKIFGLGESKVEEMVRPLLFNSNPTVAPLVGDGYVILRITAKGHDDKEISEMIEDMESRI HHEEECCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHH RGIIGDYIYAVDEEEMEEVVVKLLQKNKLTLAVSESCTGGLLAKKITDVSGASKVFNLGV HHHHHHHHEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHEEEE VSYSNEAKENILGVRKSTLESYGAVSYETAKEMAENVRKLANADFGLSTTGIAGPTGGTP EECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC EKPVGLVYVGFATNEEVYVKKLMLSGDRSKIRTRTVLHALDIVRRYLLGIKID CCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRGEIISVGTELLLGQILNTNAKYLSEKLALLGIDIYFHTNVGDNEERLKECLNIAFNRS CCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHCCCC DLIITTGGLGPTVDDITKETVASFLGLPLVENLEAKEEIIRFFEKIGQTPTMNNFKQAFF CEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHC PEGAKILPNKNGTAPGCIIEKDNKIIIILPGPPSELIPMFEEYVYHYLKSKTNETIKSRV CCCCEECCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH IKIFGLGESKVEEMVRPLLFNSNPTVAPLVGDGYVILRITAKGHDDKEISEMIEDMESRI HHEEECCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHH RGIIGDYIYAVDEEEMEEVVVKLLQKNKLTLAVSESCTGGLLAKKITDVSGASKVFNLGV HHHHHHHHEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCCHHHHEEEE VSYSNEAKENILGVRKSTLESYGAVSYETAKEMAENVRKLANADFGLSTTGIAGPTGGTP EECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC EKPVGLVYVGFATNEEVYVKKLMLSGDRSKIRTRTVLHALDIVRRYLLGIKID CCCCEEEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA