Click here to switch to the map view.

The map label for this gene is recA [H]

Identifier: 167040264

GI number: 167040264

Start: 1644387

End: 1645412

Strand: Reverse

Name: recA [H]

Synonym: Teth514_1627

Alternate gene names: 167040264

Gene position: 1645412-1644387 (Counterclockwise)

Preceding gene: 167040265

Following gene: 167040263

Centisome position: 66.96

GC content: 37.23

Gene sequence:

>1026_bases
ATGATAGAAAAACAAAAGGCTTTAGAAATGGCTATAAGTCAAATAGAGAGGCAGTTTGGCAAGGGCTCTATCATGAGATT
GGGAGATACTGCAAAATTGAATGTAGAAGTAATACCTACAGGTTCTCTTGAATTAGACATTGCTTTAGGTGTCGGAGGAG
TCCCTCGAGGAAGAATAATAGAAATTTTTGGCCCTGAGTCTTCAGGAAAAACCACCTTAGCGCTACACATGATAGCAGAA
GCACAAAAAATGGGAGGAACAGGTGCTTTTATAGATGCAGAACATGCTCTTGATCCTGTATATGCAAAAAATCTTGGTGT
CAATATTGAGGACTTATTAGTAGCACAGCCTGATACTGGCGAACAAGCCTTAGAAATTGCAGAAGCCCTTGTTAGAAGTG
GTGCTGTTGATATAATTGTGATAGACTCTGTTGCCGCTTTAGTACCTAAGGCGGAGATTGATGGTGAAATGGGAGATAGC
CATGTAGGGCTTCAAGCAAGATTGATGTCTCAAGCTTTGAGAAAATTAGCAGGGGTCACCAGTAAGTCTAAAACTATTGT
GGTCTTTATAAACCAGCTTAGAGAAAAAGTAGGTGTTCTGTTTGGAAATCCTGAAACAACCCCTGGAGGAAGAGCTCTGA
AATTTTATGCTACAATAAGACTAGATGTGAGAAAAGTGGATGCAATAAAACAAGGAAATGAAATAATCGGAAATAGAACC
CGTGTCAAAGTTGTAAAAAATAAAATTGCTCCGCCTTTTAAACAAGCAGAATTCGATATAATGTATGGAGAAGGTATTTC
AAGAGAAGGAAGCATTTTGGATATTGGCACAAGTATAGACATAATTGAAAAAAGTGGTGCTTGGTATTCCTATGGAGATA
TACGATTAGGGCAAGGAAGAGAAAACGCAAAGCAATTTTTAAAAGAAAACAAAGAAATCGCTGATGAAATTGAAAGAAAA
ATTAGAGAAAATTTCAATCTAGCTTATAATAAAATAAAATCCTCCCCTGATGCAATAGTAGAATGA

Upstream 100 bases:

>100_bases
GTAAGAAGATATCTTCTGGGAATAAAAATTGACTAGTTATGTCCATTAATATATAATTAATTTAATACAATACCCTGTAT
TCTTGGGAGGTAAATAATAA

Downstream 100 bases:

>100_bases
CCCCTTATTGTGGGGTTATTTTATTACAAAGGAGAAATAAGCATGATAATAACTACTATCGAAAAGCAGAAAAAAACGCA
ATATAATGTTTACATAGATG

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIEKQKALEMAISQIERQFGKGSIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRIIEIFGPESSGKTTLALHMIAE
AQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDS
HVGLQARLMSQALRKLAGVTSKSKTIVVFINQLREKVGVLFGNPETTPGGRALKFYATIRLDVRKVDAIKQGNEIIGNRT
RVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLGQGRENAKQFLKENKEIADEIERK
IRENFNLAYNKIKSSPDAIVE

Sequences:

>Translated_341_residues
MIEKQKALEMAISQIERQFGKGSIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRIIEIFGPESSGKTTLALHMIAE
AQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDS
HVGLQARLMSQALRKLAGVTSKSKTIVVFINQLREKVGVLFGNPETTPGGRALKFYATIRLDVRKVDAIKQGNEIIGNRT
RVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLGQGRENAKQFLKENKEIADEIERK
IRENFNLAYNKIKSSPDAIVE
>Mature_341_residues
MIEKQKALEMAISQIERQFGKGSIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRIIEIFGPESSGKTTLALHMIAE
AQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDS
HVGLQARLMSQALRKLAGVTSKSKTIVVFINQLREKVGVLFGNPETTPGGRALKFYATIRLDVRKVDAIKQGNEIIGNRT
RVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLGQGRENAKQFLKENKEIADEIERK
IRENFNLAYNKIKSSPDAIVE

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=338, Percent_Identity=64.4970414201183, Blast_Score=456, Evalue=1e-129,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 37011; Mature: 37011

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00321 RECA_1 ; PS50162 RECA_2 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKQKALEMAISQIERQFGKGSIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRII
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEECCCEEEEEEECCCCCCCCCEE
EIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDTG
EEECCCCCCCEEEEHHHHHHHHHCCCCCCEEEHHHCCCCHHHHHCCCCHHHEEEECCCCC
EQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGVT
HHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
SKSKTIVVFINQLREKVGVLFGNPETTPGGRALKFYATIRLDVRKVDAIKQGNEIIGNRT
CCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEEEEEEEEHHHHHHHHCCCHHHCCCC
RVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLGQGR
EEEEEHHHCCCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCEEEECCEEECCCH
ENAKQFLKENKEIADEIERKIRENFNLAYNKIKSSPDAIVE
HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCC
>Mature Secondary Structure
MIEKQKALEMAISQIERQFGKGSIMRLGDTAKLNVEVIPTGSLELDIALGVGGVPRGRII
CCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEEEECCCEEEEEEECCCCCCCCCEE
EIFGPESSGKTTLALHMIAEAQKMGGTGAFIDAEHALDPVYAKNLGVNIEDLLVAQPDTG
EEECCCCCCCEEEEHHHHHHHHHCCCCCCEEEHHHCCCCHHHHHCCCCHHHEEEECCCCC
EQALEIAEALVRSGAVDIIVIDSVAALVPKAEIDGEMGDSHVGLQARLMSQALRKLAGVT
HHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHCCC
SKSKTIVVFINQLREKVGVLFGNPETTPGGRALKFYATIRLDVRKVDAIKQGNEIIGNRT
CCCCEEEEEHHHHHHHHCEEECCCCCCCCCCEEEEEEEEEEEHHHHHHHHCCCHHHCCCC
RVKVVKNKIAPPFKQAEFDIMYGEGISREGSILDIGTSIDIIEKSGAWYSYGDIRLGQGR
EEEEEHHHCCCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCEEEECCEEECCCH
ENAKQFLKENKEIADEIERKIRENFNLAYNKIKSSPDAIVE
HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]