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The map label for this gene is xerC [H]

Identifier: 167040254

GI number: 167040254

Start: 1634023

End: 1635015

Strand: Direct

Name: xerC [H]

Synonym: Teth514_1617

Alternate gene names: 167040254

Gene position: 1634023-1635015 (Clockwise)

Preceding gene: 167040253

Following gene: 167040339

Centisome position: 66.5

GC content: 32.33

Gene sequence:

>993_bases
ATGTCTAATGAAATTTCTAATAATACTTCCAATAATGGTTCTATTAAATATCCCCCTCTTCTTGAAGAATTTTTAAACTA
CTTCTCAACTGTAAAAGCCCGCTCTTATAATACTGTAAAAGCTTATGCCTATGATTTAGTTTTGTTTTTGCGTTTTTTAA
AGCAAAGGCGCCGAAAAGTTAGTCCTGATGTTGAATTTGATGAAATAGATATCTCTGATGTGGATGTTGATTTGATAGAG
TCTGTTGATTTAAACGACTTATACGCCTATCTTAACTTTGTGGCTAACGAAAGGTCTAATACTCCCCATGCTCGTGCTCG
AAAAGTAGCAAGTTTAAGGTCTTTTTATAACTATCTTTATAAAAAAGCTAAGGTGCTAAGCAAAAATCCTACTCAAGAAT
TAGAGTCGCCAAAACTTTCTGTAAGACAGCCTATTTACCTCACCCTTGATGAAAGTAAAAAACTTTTAAATTCCATAGAT
GGACCTTTTAAAGAAAGAGATTACGCAATTATCACTTTGTTTTTAAACTGTGGGCTCAGAGTTTCTGAACTGGTGAATAT
AAATTTAGACGACATAAAAGACGATAAACTAACTGTTATAGGAAAAGGAAATAAACAAAGAACAGTTTATTTAAATGATG
CCTGTATTAATGCAATAAATACATATTTGAAGGTAAGACCTAAAGAAGGAGTCAAAGATAAAAAGGCTTTGTTTTTGAGC
AAAAGGCTTAAACGCATAAGTGTTAAAACTGTACAATATACCGTAAAAAAACATTTAAAAAATGCTAATTTAGAAGGAAA
AAAATATTCTGCCCATAAATTGCGCCATACAGCCGCGACTTTGATGTACAGATATGGTAATGTAGATATAAGGACTTTAC
AAAAGCTCCTAGGGCATTCTAACGTGTCTACGACGCAAATTTATACCCATGTAGATGATTCGCAATTAAAAGAAGCTGTA
AATAAAAACCCTTTATCACAAAAGGAAGATTGA

Upstream 100 bases:

>100_bases
ATACTTGATTTTGGCTCAGAAATTATGTTATGATATATAACAAGTAATTATACGAAATAACTATTTCGTATAATTAGGAT
TGTAGAAAGGAGTTTTGAAA

Downstream 100 bases:

>100_bases
AAATAAAATTCAAGAGGAAAATCTTTCCTCTTGAATTTTATTTCGTAGCTTATTCTTCTTTGTAAATATTATTTAAAGCA
ATAGCCATTGCCAATTTTAC

Product: site-specific tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSNEISNNTSNNGSIKYPPLLEEFLNYFSTVKARSYNTVKAYAYDLVLFLRFLKQRRRKVSPDVEFDEIDISDVDVDLIE
SVDLNDLYAYLNFVANERSNTPHARARKVASLRSFYNYLYKKAKVLSKNPTQELESPKLSVRQPIYLTLDESKKLLNSID
GPFKERDYAIITLFLNCGLRVSELVNINLDDIKDDKLTVIGKGNKQRTVYLNDACINAINTYLKVRPKEGVKDKKALFLS
KRLKRISVKTVQYTVKKHLKNANLEGKKYSAHKLRHTAATLMYRYGNVDIRTLQKLLGHSNVSTTQIYTHVDDSQLKEAV
NKNPLSQKED

Sequences:

>Translated_330_residues
MSNEISNNTSNNGSIKYPPLLEEFLNYFSTVKARSYNTVKAYAYDLVLFLRFLKQRRRKVSPDVEFDEIDISDVDVDLIE
SVDLNDLYAYLNFVANERSNTPHARARKVASLRSFYNYLYKKAKVLSKNPTQELESPKLSVRQPIYLTLDESKKLLNSID
GPFKERDYAIITLFLNCGLRVSELVNINLDDIKDDKLTVIGKGNKQRTVYLNDACINAINTYLKVRPKEGVKDKKALFLS
KRLKRISVKTVQYTVKKHLKNANLEGKKYSAHKLRHTAATLMYRYGNVDIRTLQKLLGHSNVSTTQIYTHVDDSQLKEAV
NKNPLSQKED
>Mature_329_residues
SNEISNNTSNNGSIKYPPLLEEFLNYFSTVKARSYNTVKAYAYDLVLFLRFLKQRRRKVSPDVEFDEIDISDVDVDLIES
VDLNDLYAYLNFVANERSNTPHARARKVASLRSFYNYLYKKAKVLSKNPTQELESPKLSVRQPIYLTLDESKKLLNSIDG
PFKERDYAIITLFLNCGLRVSELVNINLDDIKDDKLTVIGKGNKQRTVYLNDACINAINTYLKVRPKEGVKDKKALFLSK
RLKRISVKTVQYTVKKHLKNANLEGKKYSAHKLRHTAATLMYRYGNVDIRTLQKLLGHSNVSTTQIYTHVDDSQLKEAVN
KNPLSQKED

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789261, Length=308, Percent_Identity=33.7662337662338, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1790244, Length=248, Percent_Identity=34.6774193548387, Blast_Score=129, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 37985; Mature: 37854

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNEISNNTSNNGSIKYPPLLEEFLNYFSTVKARSYNTVKAYAYDLVLFLRFLKQRRRKV
CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
SPDVEFDEIDISDVDVDLIESVDLNDLYAYLNFVANERSNTPHARARKVASLRSFYNYLY
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
KKAKVLSKNPTQELESPKLSVRQPIYLTLDESKKLLNSIDGPFKERDYAIITLFLNCGLR
HHHHHHCCCCHHHHCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
VSELVNINLDDIKDDKLTVIGKGNKQRTVYLNDACINAINTYLKVRPKEGVKDKKALFLS
EEHHEECCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHEEECCCCCCCHHHHHHHH
KRLKRISVKTVQYTVKKHLKNANLEGKKYSAHKLRHTAATLMYRYGNVDIRTLQKLLGHS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
NVSTTQIYTHVDDSQLKEAVNKNPLSQKED
CCCEEEEEEECCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SNEISNNTSNNGSIKYPPLLEEFLNYFSTVKARSYNTVKAYAYDLVLFLRFLKQRRRKV
CCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
SPDVEFDEIDISDVDVDLIESVDLNDLYAYLNFVANERSNTPHARARKVASLRSFYNYLY
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
KKAKVLSKNPTQELESPKLSVRQPIYLTLDESKKLLNSIDGPFKERDYAIITLFLNCGLR
HHHHHHCCCCHHHHCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
VSELVNINLDDIKDDKLTVIGKGNKQRTVYLNDACINAINTYLKVRPKEGVKDKKALFLS
EEHHEECCCCCCCCCCEEEEECCCCCEEEEECHHHHHHHHHHEEECCCCCCCHHHHHHHH
KRLKRISVKTVQYTVKKHLKNANLEGKKYSAHKLRHTAATLMYRYGNVDIRTLQKLLGHS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
NVSTTQIYTHVDDSQLKEAVNKNPLSQKED
CCCEEEEEEECCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]