Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

Click here to switch to the map view.

The map label for this gene is spoVAEB [H]

Identifier: 167040201

GI number: 167040201

Start: 1583698

End: 1584093

Strand: Direct

Name: spoVAEB [H]

Synonym: Teth514_1563

Alternate gene names: 167040201

Gene position: 1583698-1584093 (Clockwise)

Preceding gene: 167040200

Following gene: 167040202

Centisome position: 64.45

GC content: 33.59

Gene sequence:

>396_bases
ATGCTATTACAATATCGACAACATTATAAGGAGGTCAATATGGATTATATAAAAGCGTTTTTAATGGGAGGTTTGATTTG
TGCTATTGCACAAATTTTGATTGATAAGACTAAATTAACTCCTGCAAGAATATTAGTAACATATGTAACATTAGGAGCAA
TACTTGGAGGTCTTGGAGTTTATAAAAAATTGATAGATATAGGTGGTGCAGGAGCTACAATACCCCTTTTGGGCTTTGGA
AATTCTCTTGCCCAAGGTGTAATAAAAGCTGTTGAGAAAGATGGATTGATTGGAGTTTTTACAGGAGGATTGACAGCCAC
TGCCGGAGGAATTTCTGCTGCAGTATTTTTTGGGTACATTTTTTCTTTAATTTTTAATTCAAAGACTAAGAAATAA

Upstream 100 bases:

>100_bases
ATACAAAATGGAGTCTATAAAAAAGTTTTATTTATGGCGACGGGAGCTCTTTTATCTCCTACCAGTAGCCAGCAAGGGGA
ATCTATTCCTGGGATTGCCC

Downstream 100 bases:

>100_bases
GTATAGGTTAATGAATTTTAACTTATACTTATTTTTTTATCTTTTCCTATGGTATAATATAAAAAGCAAGGAATTATTTT
GTTGGTAAAAGGGTGATTTT

Product: SpoVA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MLLQYRQHYKEVNMDYIKAFLMGGLICAIAQILIDKTKLTPARILVTYVTLGAILGGLGVYKKLIDIGGAGATIPLLGFG
NSLAQGVIKAVEKDGLIGVFTGGLTATAGGISAAVFFGYIFSLIFNSKTKK

Sequences:

>Translated_131_residues
MLLQYRQHYKEVNMDYIKAFLMGGLICAIAQILIDKTKLTPARILVTYVTLGAILGGLGVYKKLIDIGGAGATIPLLGFG
NSLAQGVIKAVEKDGLIGVFTGGLTATAGGISAAVFFGYIFSLIFNSKTKK
>Mature_131_residues
MLLQYRQHYKEVNMDYIKAFLMGGLICAIAQILIDKTKLTPARILVTYVTLGAILGGLGVYKKLIDIGGAGATIPLLGFG
NSLAQGVIKAVEKDGLIGVFTGGLTATAGGISAAVFFGYIFSLIFNSKTKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014204
- InterPro:   IPR005562 [H]

Pfam domain/function: PF03862 SpoVA [H]

EC number: NA

Molecular weight: Translated: 13832; Mature: 13832

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQYRQHYKEVNMDYIKAFLMGGLICAIAQILIDKTKLTPARILVTYVTLGAILGGLGV
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
YKKLIDIGGAGATIPLLGFGNSLAQGVIKAVEKDGLIGVFTGGLTATAGGISAAVFFGYI
HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
FSLIFNSKTKK
HHHHHCCCCCC
>Mature Secondary Structure
MLLQYRQHYKEVNMDYIKAFLMGGLICAIAQILIDKTKLTPARILVTYVTLGAILGGLGV
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
YKKLIDIGGAGATIPLLGFGNSLAQGVIKAVEKDGLIGVFTGGLTATAGGISAAVFFGYI
HHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH
FSLIFNSKTKK
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]