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The map label for this gene is ykcB [H]

Identifier: 167039973

GI number: 167039973

Start: 1368946

End: 1371099

Strand: Direct

Name: ykcB [H]

Synonym: Teth514_1332

Alternate gene names: 167039973

Gene position: 1368946-1371099 (Clockwise)

Preceding gene: 167039972

Following gene: 167039974

Centisome position: 55.71

GC content: 36.63

Gene sequence:

>2154_bases
GTGAGGAAGATAAAAATTTCGAAGGAGATGTGTACATTATTACTAATTTTAACTTTGTCGACAGTATTAAATTTTACTAA
TTTAAGTATAGAAGGATATGGAAACAAGTATTATGCTGCTGCTGTAAAAAGCATGACCATGAGCTTAAAAAATTTTTTCT
TTGTGTCTTTTGATCCGGCTGGGTTTGTATCAGTTGACAAACCGCCGTTAGGTTTTTGGATTCAGGCAATTTCTGCCAAA
ATATTTGGTTTCAGGGGATGGAGCTTAATTTTTCCTCAAGCCTTTGCCGGGGTTATTTCAGTAGCCTTGATATATGTTAT
CGTAAAAAAAAGTTTTGGCGGCACAGCAGGGCTCATTGCGGCTTTATCCCTCGCAGTAACGCCTGTTTTTGTAGCAGATA
GCAGAAATAATACGATAGATAACTTGCTTGTTTTAACCTTGCTTTTAGCTTCTTTGTTTTTGCTTAAAGCCGCGGAAAAA
GGTAAGTTGAGATATCTTCTTTTAAGCTTTGCCTTAGTCGGCATTGGCTTTAATATAAAAATGTTGCAGGCATATATGAT
CATTCCAGCTTTGTATTTTACGTATATTATTTCTTCTGCAGTACCTATTAAAAAAAGGATGTCCCAGTTGGCTATTGCTA
CAGTCGTTTTACTTTTAATTTCTTTGTCGTGGGCGATAATTGTGGACCTAGTACCTAAAGAGGATAGACCTTACGTAGGA
AGCAGCACCAACAATACAGTAATGGAACTCATAATAGGCCATAACGGCCTTGAAAGGCTAGGAATTGGAAATAGCGGTTT
TCCAAGCGGTGCGAACCGCATAAGAATTTCTGATAGGCAGGGTCAGCCTCCAATTAATGATAGAGATAGCAATTTTGCTC
CTATTCCTCAAATACCAAACCAATATGGGCAAGATATGTTTGGCAAACAATTTGACGGATACAATCCGCCGCAGAATAAT
TTCGGCCTGGATGGTCAAAACAACATGATGCCACCAGCCAATAAGGGAAGAAATATACAGCAACGTGCAGGAGGAATGGG
CGGAACTTTTGGAGGCCAAGAAAAAGCTAGCATAACCAGGCTATTTTCCAACAATAGCCTTTCTGATCAGATAATATGGC
TATTCCCTATTGCAATATTTGGATTTATATCAGCCTCTATAAACACAAAATTAAAAAGGCCTTTTGATAATAAAGAAAAA
TTATCATTGATATTTTGGATTTCATGGCTATTGCCGGTTTTCCTGTATTTTAGCTATTCAACAGGTTTATTCCATCCATA
TTATTTAACCATGCTTGCACCACCAATTGTAGCACTTGTTGGCATTGGTCTTGTGTCAATGTGGCAATCTTATAAAACAG
GTGGATGGACTTCATGGATTTTACCTGTTGCCCTCATTATAAACGGCTTAGTTCAGATTTTAATATTGTCGTATCATTAT
AATATGTCGAATATTCCTAAGATAATAATGATAGTATTGTCTGTTTTATGCTTTGCCTCAGCAGCTATACTTATTATTTT
AAATTTAGTAAAAAGTAAAAACATGAAGCTAAGGAAGGTGCTGGTTGTTGCTGCTTTTGCAGGCCTTTTAGTAGCTCCTA
CAATTTGGTCAGCGACTACCATATTTTATCCAATGTCAGGGACTTTCCCATCAGCCGGTTTAGACCTTGCCTACAATAGA
GAGGGTAGAAATCTTGACTCTACTACTGTTGATAATTCTAATGAGAAATTAATAAGTTTCTTACAAAAGAACAAAGGAAA
TGCAAAATATTTGCTTGTTGTTGCTTCAGCGCAGGATGCAGAAGACATAATAATTAAAACTGGTGAACCTGTAATGGCAC
TGGGAGGCTTTTCTGGTACTGACAATATACTGACTTTAGACCAATTTAAGCAGTTAGTCAAAAAAGGTGAAGTAAGATAT
GTACTAGTAAATGGAAGAGGAAATGGTTCAAACAGTGAAATAATGAATTGGGTTCAACAAAATGGCAAGGTTGTTTCGAA
AAGTGAGTGGAGTGATACCAATACGACGTATAATCAGCAAAATCAAGTAGAAAATAATGTAAATTCAAATTTAGGCAATC
CTAATATTGGCGGTTTTAATGATAGAAGTTTTGGGCAACTGTACGATCTAAAGGGGGTTAACATTAACGATTGA

Upstream 100 bases:

>100_bases
ATTAAATGTGTATATATCTAAAATAATTGTTACCCTTATAGCCCAAGTGATAAACTTTCTTTTATATAAGTTATGGGTAT
TTAGTTAGGAGGAATTACTG

Downstream 100 bases:

>100_bases
TATATTCTGAAATGGCTATAATAATGTAGCCATTTCAGACTGCAGACAAAGCCCAAGGAATTCCGTATAATAAAAGGGAT
TCCTTGATTTAATGAAACAA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MRKIKISKEMCTLLLILTLSTVLNFTNLSIEGYGNKYYAAAVKSMTMSLKNFFFVSFDPAGFVSVDKPPLGFWIQAISAK
IFGFRGWSLIFPQAFAGVISVALIYVIVKKSFGGTAGLIAALSLAVTPVFVADSRNNTIDNLLVLTLLLASLFLLKAAEK
GKLRYLLLSFALVGIGFNIKMLQAYMIIPALYFTYIISSAVPIKKRMSQLAIATVVLLLISLSWAIIVDLVPKEDRPYVG
SSTNNTVMELIIGHNGLERLGIGNSGFPSGANRIRISDRQGQPPINDRDSNFAPIPQIPNQYGQDMFGKQFDGYNPPQNN
FGLDGQNNMMPPANKGRNIQQRAGGMGGTFGGQEKASITRLFSNNSLSDQIIWLFPIAIFGFISASINTKLKRPFDNKEK
LSLIFWISWLLPVFLYFSYSTGLFHPYYLTMLAPPIVALVGIGLVSMWQSYKTGGWTSWILPVALIINGLVQILILSYHY
NMSNIPKIIMIVLSVLCFASAAILIILNLVKSKNMKLRKVLVVAAFAGLLVAPTIWSATTIFYPMSGTFPSAGLDLAYNR
EGRNLDSTTVDNSNEKLISFLQKNKGNAKYLLVVASAQDAEDIIIKTGEPVMALGGFSGTDNILTLDQFKQLVKKGEVRY
VLVNGRGNGSNSEIMNWVQQNGKVVSKSEWSDTNTTYNQQNQVENNVNSNLGNPNIGGFNDRSFGQLYDLKGVNIND

Sequences:

>Translated_717_residues
MRKIKISKEMCTLLLILTLSTVLNFTNLSIEGYGNKYYAAAVKSMTMSLKNFFFVSFDPAGFVSVDKPPLGFWIQAISAK
IFGFRGWSLIFPQAFAGVISVALIYVIVKKSFGGTAGLIAALSLAVTPVFVADSRNNTIDNLLVLTLLLASLFLLKAAEK
GKLRYLLLSFALVGIGFNIKMLQAYMIIPALYFTYIISSAVPIKKRMSQLAIATVVLLLISLSWAIIVDLVPKEDRPYVG
SSTNNTVMELIIGHNGLERLGIGNSGFPSGANRIRISDRQGQPPINDRDSNFAPIPQIPNQYGQDMFGKQFDGYNPPQNN
FGLDGQNNMMPPANKGRNIQQRAGGMGGTFGGQEKASITRLFSNNSLSDQIIWLFPIAIFGFISASINTKLKRPFDNKEK
LSLIFWISWLLPVFLYFSYSTGLFHPYYLTMLAPPIVALVGIGLVSMWQSYKTGGWTSWILPVALIINGLVQILILSYHY
NMSNIPKIIMIVLSVLCFASAAILIILNLVKSKNMKLRKVLVVAAFAGLLVAPTIWSATTIFYPMSGTFPSAGLDLAYNR
EGRNLDSTTVDNSNEKLISFLQKNKGNAKYLLVVASAQDAEDIIIKTGEPVMALGGFSGTDNILTLDQFKQLVKKGEVRY
VLVNGRGNGSNSEIMNWVQQNGKVVSKSEWSDTNTTYNQQNQVENNVNSNLGNPNIGGFNDRSFGQLYDLKGVNIND
>Mature_717_residues
MRKIKISKEMCTLLLILTLSTVLNFTNLSIEGYGNKYYAAAVKSMTMSLKNFFFVSFDPAGFVSVDKPPLGFWIQAISAK
IFGFRGWSLIFPQAFAGVISVALIYVIVKKSFGGTAGLIAALSLAVTPVFVADSRNNTIDNLLVLTLLLASLFLLKAAEK
GKLRYLLLSFALVGIGFNIKMLQAYMIIPALYFTYIISSAVPIKKRMSQLAIATVVLLLISLSWAIIVDLVPKEDRPYVG
SSTNNTVMELIIGHNGLERLGIGNSGFPSGANRIRISDRQGQPPINDRDSNFAPIPQIPNQYGQDMFGKQFDGYNPPQNN
FGLDGQNNMMPPANKGRNIQQRAGGMGGTFGGQEKASITRLFSNNSLSDQIIWLFPIAIFGFISASINTKLKRPFDNKEK
LSLIFWISWLLPVFLYFSYSTGLFHPYYLTMLAPPIVALVGIGLVSMWQSYKTGGWTSWILPVALIINGLVQILILSYHY
NMSNIPKIIMIVLSVLCFASAAILIILNLVKSKNMKLRKVLVVAAFAGLLVAPTIWSATTIFYPMSGTFPSAGLDLAYNR
EGRNLDSTTVDNSNEKLISFLQKNKGNAKYLLVVASAQDAEDIIIKTGEPVMALGGFSGTDNILTLDQFKQLVKKGEVRY
VLVNGRGNGSNSEIMNWVQQNGKVVSKSEWSDTNTTYNQQNQVENNVNSNLGNPNIGGFNDRSFGQLYDLKGVNIND

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 39 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: NA

Molecular weight: Translated: 78850; Mature: 78850

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIKISKEMCTLLLILTLSTVLNFTNLSIEGYGNKYYAAAVKSMTMSLKNFFFVSFDPA
CCCEECHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHEEEEEECCC
GFVSVDKPPLGFWIQAISAKIFGFRGWSLIFPQAFAGVISVALIYVIVKKSFGGTAGLIA
CCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ALSLAVTPVFVADSRNNTIDNLLVLTLLLASLFLLKAAEKGKLRYLLLSFALVGIGFNIK
HHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
MLQAYMIIPALYFTYIISSAVPIKKRMSQLAIATVVLLLISLSWAIIVDLVPKEDRPYVG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
SSTNNTVMELIIGHNGLERLGIGNSGFPSGANRIRISDRQGQPPINDRDSNFAPIPQIPN
CCCCCHHHHHEECCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCH
QYGQDMFGKQFDGYNPPQNNFGLDGQNNMMPPANKGRNIQQRAGGMGGTFGGQEKASITR
HHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
LFSNNSLSDQIIWLFPIAIFGFISASINTKLKRPFDNKEKLSLIFWISWLLPVFLYFSYS
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
TGLFHPYYLTMLAPPIVALVGIGLVSMWQSYKTGGWTSWILPVALIINGLVQILILSYHY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NMSNIPKIIMIVLSVLCFASAAILIILNLVKSKNMKLRKVLVVAAFAGLLVAPTIWSATT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
IFYPMSGTFPSAGLDLAYNREGRNLDSTTVDNSNEKLISFLQKNKGNAKYLLVVASAQDA
EEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCC
EDIIIKTGEPVMALGGFSGTDNILTLDQFKQLVKKGEVRYVLVNGRGNGSNSEIMNWVQQ
CCEEEECCCCEEEECCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
NGKVVSKSEWSDTNTTYNQQNQVENNVNSNLGNPNIGGFNDRSFGQLYDLKGVNIND
CCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MRKIKISKEMCTLLLILTLSTVLNFTNLSIEGYGNKYYAAAVKSMTMSLKNFFFVSFDPA
CCCEECHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHEEEEEECCC
GFVSVDKPPLGFWIQAISAKIFGFRGWSLIFPQAFAGVISVALIYVIVKKSFGGTAGLIA
CCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ALSLAVTPVFVADSRNNTIDNLLVLTLLLASLFLLKAAEKGKLRYLLLSFALVGIGFNIK
HHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHH
MLQAYMIIPALYFTYIISSAVPIKKRMSQLAIATVVLLLISLSWAIIVDLVPKEDRPYVG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
SSTNNTVMELIIGHNGLERLGIGNSGFPSGANRIRISDRQGQPPINDRDSNFAPIPQIPN
CCCCCHHHHHEECCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCH
QYGQDMFGKQFDGYNPPQNNFGLDGQNNMMPPANKGRNIQQRAGGMGGTFGGQEKASITR
HHCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHH
LFSNNSLSDQIIWLFPIAIFGFISASINTKLKRPFDNKEKLSLIFWISWLLPVFLYFSYS
HHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
TGLFHPYYLTMLAPPIVALVGIGLVSMWQSYKTGGWTSWILPVALIINGLVQILILSYHY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NMSNIPKIIMIVLSVLCFASAAILIILNLVKSKNMKLRKVLVVAAFAGLLVAPTIWSATT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
IFYPMSGTFPSAGLDLAYNREGRNLDSTTVDNSNEKLISFLQKNKGNAKYLLVVASAQDA
EEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCC
EDIIIKTGEPVMALGGFSGTDNILTLDQFKQLVKKGEVRYVLVNGRGNGSNSEIMNWVQQ
CCEEEECCCCEEEECCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
NGKVVSKSEWSDTNTTYNQQNQVENNVNSNLGNPNIGGFNDRSFGQLYDLKGVNIND
CCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]