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The map label for this gene is cggR [H]

Identifier: 167039948

GI number: 167039948

Start: 1341739

End: 1342761

Strand: Direct

Name: cggR [H]

Synonym: Teth514_1305

Alternate gene names: 167039948

Gene position: 1341739-1342761 (Clockwise)

Preceding gene: 167039947

Following gene: 167039949

Centisome position: 54.6

GC content: 35.09

Gene sequence:

>1023_bases
ATGAAAGATATTATAGCTTTACAACAAAAGATAGTACCAGAGTTAATAGATTTACTTCAAAAGAGATATACTATAATGCG
AAACATATATTTTAATCAACCTATAGGACGACGGGCACTTTCGCACCAGTTGAATATGGGGGAACGAATAATTAGAACTG
AGGTATCTTTTTTGAAGGCTCAAGGTTTGGTGGATATAAATCCCTTAGGTATGACTATCACAAAAGAGGGAGAAGAATTA
ATTGAGAATTTGAAGGATTTTATACATGAGCTTAAAGGCCTTAACAATATTGAGAGTTTGTTAAAGGACAAGCTGGGGAT
TGAGAAAGTGATAATCGTACCAGGCGACATAGAACAAGATCCTATGATAAAAAAAGAATTAGGAAAATCAGCAGCGAATT
ACCTAAAAACTATAATAAATTATGACAGTATTATTGCTTTAACTGGCGGTTCAACTGTGCTGGAAGTGGCTAATGGAATG
CCTCAGCTTTATTCCAAATCAAACATGGTAGTTGTACCTGCTCGTGGTGGATTGGGGAGAGAAGTAGAAAAGCAAGCGAA
TACAATCGCTTCAATTTTAGCTAAAAAACTTGGTGGTACATATAAAATGTTGCACGTGCCGGATAATTTAGGCAAAGAAG
CGGTAAAAAGCCTTATCAAAGAGCCGGATATAAAAGATGTGGTAGAAACCTTAAAAAAAGCTGATATTTTAATATTTGGA
ATAGGTCGCGCAGATGTAATGGCAGAGAGAAGAAATTTACCCCAAGATATTAGAGATTTTTTAGTAAGGAACAATGCTAC
AGCTGAAGCTTTAGGATATTATTTTGATAAAGAAGGAAAAGTGGTCTATGCAACACCAAGCATTTTCTTGACTTTAGAAG
ACCTAAAGCTTGTTAAAAATTTAATAGCTGTATCTGGTGGGAAAAATAAAGCAGAAGCGATTGTCTCTACTTGTAGAAGT
GGCAATGTACAAGTGCTTGTCACTGATGAAGGAGCTGCATTTGAGATTTTAAAAATTGTTTAA

Upstream 100 bases:

>100_bases
CTTTATTAATAGTATAAAATAGTTAATGTAAATACTTTTTATGAAATGTGGGACATTTATAGAATAACGGGACTTTAACC
GTCCTGAAGAGGGAAATGGC

Downstream 100 bases:

>100_bases
AACACCTTTTCAGGTGTTTATAAAATAAAAATCAAGGAGGAATACATAATGGGTGTTAAAGTTGCTATTAATGGTTTTGG
AAGAATTGGAAGAAATGTAT

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MKDIIALQQKIVPELIDLLQKRYTIMRNIYFNQPIGRRALSHQLNMGERIIRTEVSFLKAQGLVDINPLGMTITKEGEEL
IENLKDFIHELKGLNNIESLLKDKLGIEKVIIVPGDIEQDPMIKKELGKSAANYLKTIINYDSIIALTGGSTVLEVANGM
PQLYSKSNMVVVPARGGLGREVEKQANTIASILAKKLGGTYKMLHVPDNLGKEAVKSLIKEPDIKDVVETLKKADILIFG
IGRADVMAERRNLPQDIRDFLVRNNATAEALGYYFDKEGKVVYATPSIFLTLEDLKLVKNLIAVSGGKNKAEAIVSTCRS
GNVQVLVTDEGAAFEILKIV

Sequences:

>Translated_340_residues
MKDIIALQQKIVPELIDLLQKRYTIMRNIYFNQPIGRRALSHQLNMGERIIRTEVSFLKAQGLVDINPLGMTITKEGEEL
IENLKDFIHELKGLNNIESLLKDKLGIEKVIIVPGDIEQDPMIKKELGKSAANYLKTIINYDSIIALTGGSTVLEVANGM
PQLYSKSNMVVVPARGGLGREVEKQANTIASILAKKLGGTYKMLHVPDNLGKEAVKSLIKEPDIKDVVETLKKADILIFG
IGRADVMAERRNLPQDIRDFLVRNNATAEALGYYFDKEGKVVYATPSIFLTLEDLKLVKNLIAVSGGKNKAEAIVSTCRS
GNVQVLVTDEGAAFEILKIV
>Mature_340_residues
MKDIIALQQKIVPELIDLLQKRYTIMRNIYFNQPIGRRALSHQLNMGERIIRTEVSFLKAQGLVDINPLGMTITKEGEEL
IENLKDFIHELKGLNNIESLLKDKLGIEKVIIVPGDIEQDPMIKKELGKSAANYLKTIINYDSIIALTGGSTVLEVANGM
PQLYSKSNMVVVPARGGLGREVEKQANTIASILAKKLGGTYKMLHVPDNLGKEAVKSLIKEPDIKDVVETLKKADILIFG
IGRADVMAERRNLPQDIRDFLVRNNATAEALGYYFDKEGKVVYATPSIFLTLEDLKLVKNLIAVSGGKNKAEAIVSTCRS
GNVQVLVTDEGAAFEILKIV

Specific function: Represses the transcription of the gapA gene [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1787791, Length=260, Percent_Identity=26.5384615384615, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI87082414, Length=250, Percent_Identity=24.8, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 37583; Mature: 37583

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIIALQQKIVPELIDLLQKRYTIMRNIYFNQPIGRRALSHQLNMGERIIRTEVSFLKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
QGLVDINPLGMTITKEGEELIENLKDFIHELKGLNNIESLLKDKLGIEKVIIVPGDIEQD
CCCEEECCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCC
PMIKKELGKSAANYLKTIINYDSIIALTGGSTVLEVANGMPQLYSKSNMVVVPARGGLGR
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCHHHHCCCCEEEEECCCCCCH
EVEKQANTIASILAKKLGGTYKMLHVPDNLGKEAVKSLIKEPDIKDVVETLKKADILIFG
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEE
IGRADVMAERRNLPQDIRDFLVRNNATAEALGYYFDKEGKVVYATPSIFLTLEDLKLVKN
CCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHEECCCCCEEEECCCEEEEHHHHHHHHH
LIAVSGGKNKAEAIVSTCRSGNVQVLVTDEGAAFEILKIV
HHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEHEEEC
>Mature Secondary Structure
MKDIIALQQKIVPELIDLLQKRYTIMRNIYFNQPIGRRALSHQLNMGERIIRTEVSFLKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
QGLVDINPLGMTITKEGEELIENLKDFIHELKGLNNIESLLKDKLGIEKVIIVPGDIEQD
CCCEEECCCCEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCC
PMIKKELGKSAANYLKTIINYDSIIALTGGSTVLEVANGMPQLYSKSNMVVVPARGGLGR
CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCHHHHCCCCEEEEECCCCCCH
EVEKQANTIASILAKKLGGTYKMLHVPDNLGKEAVKSLIKEPDIKDVVETLKKADILIFG
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHCCEEEEE
IGRADVMAERRNLPQDIRDFLVRNNATAEALGYYFDKEGKVVYATPSIFLTLEDLKLVKN
CCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHEECCCCCEEEECCCEEEEHHHHHHHHH
LIAVSGGKNKAEAIVSTCRSGNVQVLVTDEGAAFEILKIV
HHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEHEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]