Click here to switch to the map view.

The map label for this gene is cadC [H]

Identifier: 167039919

GI number: 167039919

Start: 1313528

End: 1313902

Strand: Direct

Name: cadC [H]

Synonym: Teth514_1275

Alternate gene names: 167039919

Gene position: 1313528-1313902 (Clockwise)

Preceding gene: 167039918

Following gene: 167039920

Centisome position: 53.46

GC content: 33.33

Gene sequence:

>375_bases
ATGGCAAAAAAAATTCAACCAATTGAAAGATGCGACTGTGATGTAATACATGAGGAAATTGTAAATAAAGTGCGAGAAAA
AATGCCTCAAGAAGAAACTCTATATGATCTAGCAGAACTATTTAAAGTTTTTGGAGATTCAACAAGAATTAAGATACTCT
GGGCATTAGATGAATCAGAGATGTGCGTTTGCGATATTGCATTCTTATTAAATATGACCCAATCAGCAATTTCACATCAG
CTAAGAGTCTTAAAGCAGGCTGGACTAGTAAAGAGCAGAAGAGAAGGAAAGATTGTATTCTACTCTCTTGAAGATGAACA
TGTAAAGCAAATATTTGACCAGGGATTAATTCATATTTCAGAAGAAAGTAAGTAA

Upstream 100 bases:

>100_bases
TTACTCATATGTTTTTATTGACAAACGGAGAATTGAGGTTTATAATACATATGAAAGCTTATTCAAGTGTTCAATTGAAT
GATAAGGAGGTGATATAAAT

Downstream 100 bases:

>100_bases
AGGAGGGTCAGTAATGTTAAAGAAGGAAGTAATTTTAGAAGGTTTAGATTGTGCAAATTGTGCAGCTAAAATTGAAGATG
AGGTTAATAAATTAAATGGA

Product: regulatory protein ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MAKKIQPIERCDCDVIHEEIVNKVREKMPQEETLYDLAELFKVFGDSTRIKILWALDESEMCVCDIAFLLNMTQSAISHQ
LRVLKQAGLVKSRREGKIVFYSLEDEHVKQIFDQGLIHISEESK

Sequences:

>Translated_124_residues
MAKKIQPIERCDCDVIHEEIVNKVREKMPQEETLYDLAELFKVFGDSTRIKILWALDESEMCVCDIAFLLNMTQSAISHQ
LRVLKQAGLVKSRREGKIVFYSLEDEHVKQIFDQGLIHISEESK
>Mature_123_residues
AKKIQPIERCDCDVIHEEIVNKVREKMPQEETLYDLAELFKVFGDSTRIKILWALDESEMCVCDIAFLLNMTQSAISHQL
RVLKQAGLVKSRREGKIVFYSLEDEHVKQIFDQGLIHISEESK

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: COG0640

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 14410; Mature: 14279

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKIQPIERCDCDVIHEEIVNKVREKMPQEETLYDLAELFKVFGDSTRIKILWALDESE
CCCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
MCVCDIAFLLNMTQSAISHQLRVLKQAGLVKSRREGKIVFYSLEDEHVKQIFDQGLIHIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCEEEC
EESK
CCCC
>Mature Secondary Structure 
AKKIQPIERCDCDVIHEEIVNKVREKMPQEETLYDLAELFKVFGDSTRIKILWALDESE
CCCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCC
MCVCDIAFLLNMTQSAISHQLRVLKQAGLVKSRREGKIVFYSLEDEHVKQIFDQGLIHIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCEEEC
EESK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA