| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039899
Identifier: 167039899
GI number: 167039899
Start: 1294819
End: 1296018
Strand: Direct
Name: 167039899
Synonym: Teth514_1254
Alternate gene names: NA
Gene position: 1294819-1296018 (Clockwise)
Preceding gene: 167039898
Following gene: 167039900
Centisome position: 52.69
GC content: 43.0
Gene sequence:
>1200_bases ATGAGTAAAATTCTTGAACTGCGTGAAAAACGCGCAAAAGCATGGGAAGCAGCAAAGGCATTTCTTGATTCAAAGCGTGG TAGTGATGGGCTTGTATCCGCAGAAGATGCAGCAACCTATGACAAAATGGAAGAAGACATTATTAATCTCGGTAAGGAAA TAGCAAGATTGGAACGTCAAGAGGCTCTTGAAGCAGAGCTTAATAAGCCAGTAAATATGCCTCTTACTGGAAAGCCAGCT GTTCCAGGGATGGATGCAAAGACCGGAAGAGCCAGTGATGAATATAGGAAAGCATTCTGGAACGTAATGCGTAGCAAAAA CCCTCGTCATGATGTGTTAAACGCCTTATCTGTAGGCACTGATTCTGAGGGAGGATACCTTGTTCCTGATGAATTTGAGC GCACCTTGGTTCAAACTCTTGAGGAAGAGAATGTATTCCGTAAACTTGCAAAGATTATTCAAACTTCAAGTGGTGATCGT AAAATCCCGGTTGTGGTGACCAAAGGCACAGCTGCTTGGCTTGACGAAGGTGAGGAGTTTGATGAGAGTGATTCTGTATT CGGTCAGACATCTATTGGTGCTTACAAGCTGGGTACAATGATTAAAGTTTCTGATGAACTTCTCAATGACAGTGTATTTG ATCTGGAGAATTATATCTCCACTGAATTTGCCCGTAGAATCGGTGCTAAGGAAGAAGAAGCTTTTTTAGTTGGAGACGGA GATGGAAAACCTACTGGTATTTTCAACGCAACAGGCGGAGCACAGCTTGGAGTGACAGCAGGGTCTGCAACTGCTATTAC TGCAGATGAGATTATCGATCTTGTTTACTCATTAAAAGCGCCATATAGAAAGAACGCGGTATTCCTGATGAATGATGCAA CAGTAAAGGCAATCCGTAAGCTGAAAGACGGTCAAGGTCAATATCTGTGGCAGCCTTCTTTAACAGCAGGTACTCCAGAT ACTTTATTAAATCGTCCGGTTTATACTTCAGCTTATGCTCCTACTATTGAAGCTGGAGCTAAAACTATTGCCTTCGGTGA TTTCGGATATTATTGGATTGCCGATAGACAGGGACGTTCTTTCAAACGTTTAAACGAGCTTTTTGCAACCACAGGGCAGG TTGGTTTCCTTGCGAGCCAGCGTGTAGATGGAAAGCTTATCTTACCTGAAGCCATCAAAGTTCTTCAGCAGAAGGCTTAA
Upstream 100 bases:
>100_bases CCAATTCACTAATGAATAAACTTCAAAAACCAGTTGTAAAACAGTCAGTAGAGCCGCTTTATGAGCGGCTTAATTTATTG AAATATTAGGAGGAATAAAA
Downstream 100 bases:
>100_bases TGGGAGGTGTAAATGATGAGCTATAACGCAAAGAACTACACCGAACAAGGAGGGGAAAAGACAGTTATAGGTGGAGAGCT TGTAATTGAAGAGGGAGCCA
Product: HK97 family phage major capsid protein
Products: NA
Alternate protein names: HK97 Family Phage Capsid Protein; Phage Capsid Protein HK; Capsid Protein; HK97 Family Capsid Protein; Phage Capsid Protein; Capsid Protein Of Prophage; Phage Prohead Protease; Capsid Protein HK; Phage Capsid Family; Phage Prohead Protease And Phage Capsid Protein; Phage-Related Head Protein; PhiRv2 Prophage Protein; Phage Phi-C31 Capsid; Capsid-Like Protein; Prophage; PhiRV1 Phage Protein; Phage Capsid Protein Gp; HK97 Family Phage Prohead Protease/Phage Capsid Protein; Capsid; Capsid C; Phage Capsid Family Protein; Phage Capsid Family; Phage Capsid Protein-Like Protein
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSKILELREKRAKAWEAAKAFLDSKRGSDGLVSAEDAATYDKMEEDIINLGKEIARLERQEALEAELNKPVNMPLTGKPA VPGMDAKTGRASDEYRKAFWNVMRSKNPRHDVLNALSVGTDSEGGYLVPDEFERTLVQTLEEENVFRKLAKIIQTSSGDR KIPVVVTKGTAAWLDEGEEFDESDSVFGQTSIGAYKLGTMIKVSDELLNDSVFDLENYISTEFARRIGAKEEEAFLVGDG DGKPTGIFNATGGAQLGVTAGSATAITADEIIDLVYSLKAPYRKNAVFLMNDATVKAIRKLKDGQGQYLWQPSLTAGTPD TLLNRPVYTSAYAPTIEAGAKTIAFGDFGYYWIADRQGRSFKRLNELFATTGQVGFLASQRVDGKLILPEAIKVLQQKA
Sequences:
>Translated_399_residues MSKILELREKRAKAWEAAKAFLDSKRGSDGLVSAEDAATYDKMEEDIINLGKEIARLERQEALEAELNKPVNMPLTGKPA VPGMDAKTGRASDEYRKAFWNVMRSKNPRHDVLNALSVGTDSEGGYLVPDEFERTLVQTLEEENVFRKLAKIIQTSSGDR KIPVVVTKGTAAWLDEGEEFDESDSVFGQTSIGAYKLGTMIKVSDELLNDSVFDLENYISTEFARRIGAKEEEAFLVGDG DGKPTGIFNATGGAQLGVTAGSATAITADEIIDLVYSLKAPYRKNAVFLMNDATVKAIRKLKDGQGQYLWQPSLTAGTPD TLLNRPVYTSAYAPTIEAGAKTIAFGDFGYYWIADRQGRSFKRLNELFATTGQVGFLASQRVDGKLILPEAIKVLQQKA >Mature_398_residues SKILELREKRAKAWEAAKAFLDSKRGSDGLVSAEDAATYDKMEEDIINLGKEIARLERQEALEAELNKPVNMPLTGKPAV PGMDAKTGRASDEYRKAFWNVMRSKNPRHDVLNALSVGTDSEGGYLVPDEFERTLVQTLEEENVFRKLAKIIQTSSGDRK IPVVVTKGTAAWLDEGEEFDESDSVFGQTSIGAYKLGTMIKVSDELLNDSVFDLENYISTEFARRIGAKEEEAFLVGDGD GKPTGIFNATGGAQLGVTAGSATAITADEIIDLVYSLKAPYRKNAVFLMNDATVKAIRKLKDGQGQYLWQPSLTAGTPDT LLNRPVYTSAYAPTIEAGAKTIAFGDFGYYWIADRQGRSFKRLNELFATTGQVGFLASQRVDGKLILPEAIKVLQQKA
Specific function: Unknown
COG id: COG4653
COG function: function code R; Predicted phage phi-C31 gp36 major capsid-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43746; Mature: 43615
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKILELREKRAKAWEAAKAFLDSKRGSDGLVSAEDAATYDKMEEDIINLGKEIARLERQ CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH EALEAELNKPVNMPLTGKPAVPGMDAKTGRASDEYRKAFWNVMRSKNPRHDVLNALSVGT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC DSEGGYLVPDEFERTLVQTLEEENVFRKLAKIIQTSSGDRKIPVVVTKGTAAWLDEGEEF CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCCCCCC DESDSVFGQTSIGAYKLGTMIKVSDELLNDSVFDLENYISTEFARRIGAKEEEAFLVGDG CCCCCCCCCCCCCHHHHCCEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECC DGKPTGIFNATGGAQLGVTAGSATAITADEIIDLVYSLKAPYRKNAVFLMNDATVKAIRK CCCCCEEEECCCCCEEEEECCCCCEECHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH LKDGQGQYLWQPSLTAGTPDTLLNRPVYTSAYAPTIEAGAKTIAFGDFGYYWIADRQGRS HHCCCCCEEECCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCEEEEECCCEEEEECCCCCH FKRLNELFATTGQVGFLASQRVDGKLILPEAIKVLQQKA HHHHHHHHHCCCCHHHHHHCCCCCEEECHHHHHHHHHCC >Mature Secondary Structure SKILELREKRAKAWEAAKAFLDSKRGSDGLVSAEDAATYDKMEEDIINLGKEIARLERQ CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHH EALEAELNKPVNMPLTGKPAVPGMDAKTGRASDEYRKAFWNVMRSKNPRHDVLNALSVGT HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC DSEGGYLVPDEFERTLVQTLEEENVFRKLAKIIQTSSGDRKIPVVVTKGTAAWLDEGEEF CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCCCCCC DESDSVFGQTSIGAYKLGTMIKVSDELLNDSVFDLENYISTEFARRIGAKEEEAFLVGDG CCCCCCCCCCCCCHHHHCCEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECC DGKPTGIFNATGGAQLGVTAGSATAITADEIIDLVYSLKAPYRKNAVFLMNDATVKAIRK CCCCCEEEECCCCCEEEEECCCCCEECHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHH LKDGQGQYLWQPSLTAGTPDTLLNRPVYTSAYAPTIEAGAKTIAFGDFGYYWIADRQGRS HHCCCCCEEECCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCEEEEECCCEEEEECCCCCH FKRLNELFATTGQVGFLASQRVDGKLILPEAIKVLQQKA HHHHHHHHHCCCCHHHHHHCCCCCEEECHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA