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The map label for this gene is opuCC [H]

Identifier: 167039848

GI number: 167039848

Start: 1242009

End: 1242923

Strand: Direct

Name: opuCC [H]

Synonym: Teth514_1203

Alternate gene names: 167039848

Gene position: 1242009-1242923 (Clockwise)

Preceding gene: 167039847

Following gene: 167039849

Centisome position: 50.54

GC content: 33.88

Gene sequence:

>915_bases
ATGAAAAGAATTTTGCTATTAAGTTTGGTTTTTATTTTAGCTGTTACTTTCATGGCATCTTGCGGTATTGGCAGTTCTCA
AAGGAATGCAAATGATACTGTAGTTGTAGGATCAAAAAATTTTACAGAGCAAATTATCGTAGCTAATATGGTTGCCGAAA
TGATTGAAGCACATACCGATCTCAAAGTAGTGCGAAAACTAAACCTTGGCGGTACAAATGTAAACTTTGAGGCGATAAAA
AGGGGAGGTGCGAATAACGGAATAGATATTTATGTTGAATATACAGGGACAGGTTTGGTGGACATATTAGGGATGGAACC
TACTACTGATCCAGAAAAAGCTTATGAAACAGTGAAGAAAGAATATAAAGACAAATGGAATATAGTATGGTTGAAGCCAC
TTGGATTCAATAATACCTATACTTTAGCTGTAAAGGATGAATTGGCAAAGCAATATAATTTAAAGACTTTTTCAGATTTA
GCTAAAATTAGCGATAAGTTAATCCTGGGAGCTACAATGGAATTTTTGGAAAGGCCTGATGGCTATCCTGGTCTACAAAA
AGTGTATAATTTTAAGTTTAAACACACAAAATCCATGGATATGGGTATAAGATATACAGCGATAGATAATAATGAAGTTC
AGGTTATTGATGCTTTTGCTACTGATGGATTGCTAGTATCTCATAAACTAAAAATACTTGAAGACGATAAACACTTTTTC
CCACCTTATTATGCTGCACCAATTATTAGGCAAGATGTGCTAGACAAACACCCTGAATTAAAAGATGTTCTCAACAAATT
GGCAAATCAAATTTCTGATGAAGAAATGCAAAAACTTAATTACAAGGTCGATGGTGAAGGGCAAGATCCAGCAAAGGTAG
CAAAAGAATTTTTAAAAGAAAAGGGATTAATTTAG

Upstream 100 bases:

>100_bases
CCAGCAATGATTTTGGCACTATTGATAGACTATATTTTACTTTTAGTAGAAAAGATAGTAACTCCAAAGGGAATAAAATA
AAAAAAGGAGGAGATTTTAA

Downstream 100 bases:

>100_bases
CAGCAGAAATGCAAAGCTTCCTGAATTTGGTCAATCAGGAAGCTTTATTATTTTATTTTAAGAATTAAAAATAAATTTTC
TTCACTTTATCAGTTCAATT

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKRILLLSLVFILAVTFMASCGIGSSQRNANDTVVVGSKNFTEQIIVANMVAEMIEAHTDLKVVRKLNLGGTNVNFEAIK
RGGANNGIDIYVEYTGTGLVDILGMEPTTDPEKAYETVKKEYKDKWNIVWLKPLGFNNTYTLAVKDELAKQYNLKTFSDL
AKISDKLILGATMEFLERPDGYPGLQKVYNFKFKHTKSMDMGIRYTAIDNNEVQVIDAFATDGLLVSHKLKILEDDKHFF
PPYYAAPIIRQDVLDKHPELKDVLNKLANQISDEEMQKLNYKVDGEGQDPAKVAKEFLKEKGLI

Sequences:

>Translated_304_residues
MKRILLLSLVFILAVTFMASCGIGSSQRNANDTVVVGSKNFTEQIIVANMVAEMIEAHTDLKVVRKLNLGGTNVNFEAIK
RGGANNGIDIYVEYTGTGLVDILGMEPTTDPEKAYETVKKEYKDKWNIVWLKPLGFNNTYTLAVKDELAKQYNLKTFSDL
AKISDKLILGATMEFLERPDGYPGLQKVYNFKFKHTKSMDMGIRYTAIDNNEVQVIDAFATDGLLVSHKLKILEDDKHFF
PPYYAAPIIRQDVLDKHPELKDVLNKLANQISDEEMQKLNYKVDGEGQDPAKVAKEFLKEKGLI
>Mature_304_residues
MKRILLLSLVFILAVTFMASCGIGSSQRNANDTVVVGSKNFTEQIIVANMVAEMIEAHTDLKVVRKLNLGGTNVNFEAIK
RGGANNGIDIYVEYTGTGLVDILGMEPTTDPEKAYETVKKEYKDKWNIVWLKPLGFNNTYTLAVKDELAKQYNLKTFSDL
AKISDKLILGATMEFLERPDGYPGLQKVYNFKFKHTKSMDMGIRYTAIDNNEVQVIDAFATDGLLVSHKLKILEDDKHFF
PPYYAAPIIRQDVLDKHPELKDVLNKLANQISDEEMQKLNYKVDGEGQDPAKVAKEFLKEKGLI

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=307, Percent_Identity=30.9446254071661, Blast_Score=141, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34221; Mature: 34221

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILLLSLVFILAVTFMASCGIGSSQRNANDTVVVGSKNFTEQIIVANMVAEMIEAHTD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
LKVVRKLNLGGTNVNFEAIKRGGANNGIDIYVEYTGTGLVDILGMEPTTDPEKAYETVKK
HHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHH
EYKDKWNIVWLKPLGFNNTYTLAVKDELAKQYNLKTFSDLAKISDKLILGATMEFLERPD
HHCCCCCEEEEEECCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GYPGLQKVYNFKFKHTKSMDMGIRYTAIDNNEVQVIDAFATDGLLVSHKLKILEDDKHFF
CCCCHHHHHCCHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEEEECCCCCC
PPYYAAPIIRQDVLDKHPELKDVLNKLANQISDEEMQKLNYKVDGEGQDPAKVAKEFLKE
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCEECCCCCCHHHHHHHHHHH
KGLI
CCCC
>Mature Secondary Structure
MKRILLLSLVFILAVTFMASCGIGSSQRNANDTVVVGSKNFTEQIIVANMVAEMIEAHTD
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHH
LKVVRKLNLGGTNVNFEAIKRGGANNGIDIYVEYTGTGLVDILGMEPTTDPEKAYETVKK
HHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHHHHHHH
EYKDKWNIVWLKPLGFNNTYTLAVKDELAKQYNLKTFSDLAKISDKLILGATMEFLERPD
HHCCCCCEEEEEECCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
GYPGLQKVYNFKFKHTKSMDMGIRYTAIDNNEVQVIDAFATDGLLVSHKLKILEDDKHFF
CCCCHHHHHCCHHCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEEEEEECCCCCC
PPYYAAPIIRQDVLDKHPELKDVLNKLANQISDEEMQKLNYKVDGEGQDPAKVAKEFLKE
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHCCCEECCCCCCHHHHHHHHHHH
KGLI
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]