| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is ymfM [H]
Identifier: 167039831
GI number: 167039831
Start: 1222606
End: 1223406
Strand: Direct
Name: ymfM [H]
Synonym: Teth514_1186
Alternate gene names: 167039831
Gene position: 1222606-1223406 (Clockwise)
Preceding gene: 167039830
Following gene: 167039832
Centisome position: 49.75
GC content: 32.46
Gene sequence:
>801_bases ATGAAGGAATTGGGAGAATTTTTAAAAAGTGAAAGAATTAAAATGGGATTGACTCTTGAAGAAATTCAAGAAATAACTAA AATACGGATACGCTATTTGAAAGCTATTGAAGATGGAGATTTTAGCGTAATGCCTGCACTTGTATATGCTAAGGGCTTTG TAAAAAGTTACGCTGAGGCCTTAGGGTTAGATGGCAATGAGTTAGTAAAAAAGTATGAGTATTTGTTTCAGGAGAAAGAG GAGGAAGCCATACCTAATATAGAGATCACATCTTATAAAAAAGAGAGAAGAGATTTTTCACAATTTTTTTTGACTTTAAA AAAAGCAGTAATTGTTGTTTTAATAATAGGTATTATAGGATACGGTTTTTACTATTTTCTAATTCAAGTTAAAAAAGGAC TTGCACCAATTCCACAACAAAATCAAAGTGAAGCTTCAACAATTTCGGAAGACAAAACAAATCTTCCACAGGAAAGCAAT GTTTCTCAACTTACAGTAAAGACGTCGATTGAAAAAGTAGCAGAGACTTCTAAAAAAATAGAATATAAAGTTGTTCCCTT TGGAGAAAGTTATAAAGTAGAAATAAGCGTACCTGGCGAAAAATGTTGGTTTAGTGTAAAAGTAGATGGAAATGTCGTTT ATGAAGGCCTTATGACAAAGGATATGTCTAAAATTTTTGATGTAAAAGATAGTATTACTATCTTGATGGGTTATCCGCCA GCTGTTAAAATAACTGTAGATGGTGAGGAGCTACCAACAGTGCAAACACCGTCACCAGTTACAATAAATATACATACATA G
Upstream 100 bases:
>100_bases AAATCATCCTTTTAATTTTTATTTTTCCGAAAATAATGAAGGAAAAATGTATTTTGTGTGGAATATATAATAAGTGGATG GTTAGTAAGGGGTGATAGGT
Downstream 100 bases:
>100_bases AAAGGGGAAAGAGATGATAAAAGAAGCTATATTTCATAAAAGCGATATGCCTTACGCATATCCACTGAATGAAAATCAAT TAAAGATAGTACTAAGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEALGLDGNELVKKYEYLFQEKE EEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIGYGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESN VSQLTVKTSIEKVAETSKKIEYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP AVKITVDGEELPTVQTPSPVTINIHT
Sequences:
>Translated_266_residues MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEALGLDGNELVKKYEYLFQEKE EEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIGYGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESN VSQLTVKTSIEKVAETSKKIEYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP AVKITVDGEELPTVQTPSPVTINIHT >Mature_266_residues MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEALGLDGNELVKKYEYLFQEKE EEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIGYGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESN VSQLTVKTSIEKVAETSKKIEYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP AVKITVDGEELPTVQTPSPVTINIHT
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30093; Mature: 30093
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEA CHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LGLDGNELVKKYEYLFQEKEEEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIG HCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESNVSQLTVKTSIEKVAETSKKI HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHCE EYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP EEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCCCEEEEEECCC AVKITVDGEELPTVQTPSPVTINIHT EEEEEECCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure MKELGEFLKSERIKMGLTLEEIQEITKIRIRYLKAIEDGDFSVMPALVYAKGFVKSYAEA CHHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH LGLDGNELVKKYEYLFQEKEEEAIPNIEITSYKKERRDFSQFFLTLKKAVIVVLIIGIIG HCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YGFYYFLIQVKKGLAPIPQQNQSEASTISEDKTNLPQESNVSQLTVKTSIEKVAETSKKI HHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHCCCCCCCCCCEEEHHHHHHHHHHHHHCE EYKVVPFGESYKVEISVPGEKCWFSVKVDGNVVYEGLMTKDMSKIFDVKDSITILMGYPP EEEEEECCCCEEEEEEECCCCEEEEEEECCCEEEHHHHHHHHHHHHCCCCCEEEEEECCC AVKITVDGEELPTVQTPSPVTINIHT EEEEEECCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]