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The map label for this gene is ylbK [H]

Identifier: 167039819

GI number: 167039819

Start: 1210295

End: 1211158

Strand: Direct

Name: ylbK [H]

Synonym: Teth514_1174

Alternate gene names: 167039819

Gene position: 1210295-1211158 (Clockwise)

Preceding gene: 167039818

Following gene: 167039820

Centisome position: 49.25

GC content: 32.64

Gene sequence:

>864_bases
ATGAGACCAAAAGTAGGACTTATACTAGGTGGTGGAGCAGCAAGAGGATATGCGCACTTAGGTATACTAAAAAGATTTGA
AGAAGAAAATATTCCTATTGACTTTATAATAGGCATAAGTATGGGAGCGATAATAGGAGCAATCTATGCTTCAGGACATA
ATGTAGACAAACTTATAAGTGATGCAAAAAAGATTAATATGTTAAAATTTTTAAACTTATTGGATTTTAAAACATCACAA
ACTGGTTTGGTAAAAGGCGAAAAAATAGAAAAATATTTGCAGGTCTATATAAAAGAAAGATTTGAAGAGCTTAATATCCC
TCTATATATTGTGGCTACGGATATTCACACAGGAAAAGAAGTAGTATTCTCAGAAGGAGACTTGATAAAAGCTATAAGAG
CAAGTATTTCTATTCCTGTCATTTTTGAACCTGTGGAATACAATGGAACCAAGTTAGTTGATGGGTCAATTATTGATTTT
GACGCAGTAGGATTAGCAGCTAAATTGGGTGCAGACATAATTATAGAATGTGATGTGAGCTCTAGCATAGATATGGGAGT
TTTTGAAAAAACCTTTTATTCTTTAGCTAATAGTGATAAGTTGCTGCCTCTAAAAAAATATTTCAATTTAAAAAGGACAG
CGCCTGAAATTATATCCATTACAGCTACAACTATGAAGTTATTAAAAGACAGTTCTAACAAAAATTCTGAAAAAACAGAG
AGGGGTAAAAGAGTCTATACAATAAAACCTAATGTTAATAATATTCGCTGGTATAGGTTTGACCAGGCGGGAAAATGCAT
AAATATGGGATTTGAAGCTGCCGATTCTATTGTTTGGAGAATAAAGAGAGAACTGGAAGTATAG

Upstream 100 bases:

>100_bases
TTGGTACGGGAATTCAAGTGATTTTAGATTCTAATGAAAATGAAATTTTGGATGCGTTAAATGCCATACAAATTATTTTT
GAGTAAAATGGTGATGGAAA

Downstream 100 bases:

>100_bases
AATAAACAACTCCCATTGATGTGAAAAAAGGAATGGAAAATACTTTTATAACTTTAAAAATCATATTGAACACCTCATAT
AATTATATGCTCTAGGTTTT

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRPKVGLILGGGAARGYAHLGILKRFEEENIPIDFIIGISMGAIIGAIYASGHNVDKLISDAKKINMLKFLNLLDFKTSQ
TGLVKGEKIEKYLQVYIKERFEELNIPLYIVATDIHTGKEVVFSEGDLIKAIRASISIPVIFEPVEYNGTKLVDGSIIDF
DAVGLAAKLGADIIIECDVSSSIDMGVFEKTFYSLANSDKLLPLKKYFNLKRTAPEIISITATTMKLLKDSSNKNSEKTE
RGKRVYTIKPNVNNIRWYRFDQAGKCINMGFEAADSIVWRIKRELEV

Sequences:

>Translated_287_residues
MRPKVGLILGGGAARGYAHLGILKRFEEENIPIDFIIGISMGAIIGAIYASGHNVDKLISDAKKINMLKFLNLLDFKTSQ
TGLVKGEKIEKYLQVYIKERFEELNIPLYIVATDIHTGKEVVFSEGDLIKAIRASISIPVIFEPVEYNGTKLVDGSIIDF
DAVGLAAKLGADIIIECDVSSSIDMGVFEKTFYSLANSDKLLPLKKYFNLKRTAPEIISITATTMKLLKDSSNKNSEKTE
RGKRVYTIKPNVNNIRWYRFDQAGKCINMGFEAADSIVWRIKRELEV
>Mature_287_residues
MRPKVGLILGGGAARGYAHLGILKRFEEENIPIDFIIGISMGAIIGAIYASGHNVDKLISDAKKINMLKFLNLLDFKTSQ
TGLVKGEKIEKYLQVYIKERFEELNIPLYIVATDIHTGKEVVFSEGDLIKAIRASISIPVIFEPVEYNGTKLVDGSIIDF
DAVGLAAKLGADIIIECDVSSSIDMGVFEKTFYSLANSDKLLPLKKYFNLKRTAPEIISITATTMKLLKDSSNKNSEKTE
RGKRVYTIKPNVNNIRWYRFDQAGKCINMGFEAADSIVWRIKRELEV

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656043, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI260656041, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI260656039, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI260656037, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI116256487, Length=183, Percent_Identity=31.6939890710383, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI148727335, Length=185, Percent_Identity=31.8918918918919, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI148727290, Length=185, Percent_Identity=31.8918918918919, Blast_Score=92, Evalue=7e-19,
Organism=Escherichia coli, GI226510936, Length=251, Percent_Identity=32.6693227091633, Blast_Score=134, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI71997299, Length=260, Percent_Identity=23.8461538461538, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71997289, Length=260, Percent_Identity=23.8461538461538, Blast_Score=79, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6323581, Length=191, Percent_Identity=30.8900523560209, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281376913, Length=186, Percent_Identity=36.0215053763441, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI28571388, Length=186, Percent_Identity=33.8709677419355, Blast_Score=85, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32032; Mature: 32032

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPKVGLILGGGAARGYAHLGILKRFEEENIPIDFIIGISMGAIIGAIYASGHNVDKLIS
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHH
DAKKINMLKFLNLLDFKTSQTGLVKGEKIEKYLQVYIKERFEELNIPLYIVATDIHTGKE
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE
VVFSEGDLIKAIRASISIPVIFEPVEYNGTKLVDGSIIDFDAVGLAAKLGADIIIECDVS
EEECCCCHHHHHHHHCCCEEEEEECCCCCCEEECCCEEEHHHHHHHHHCCCCEEEEECCC
SSIDMGVFEKTFYSLANSDKLLPLKKYFNLKRTAPEIISITATTMKLLKDSSNKNSEKTE
CCCCCHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCHHEEHHHHHHHHHHCCCCCCCCHHH
RGKRVYTIKPNVNNIRWYRFDQAGKCINMGFEAADSIVWRIKRELEV
HCCEEEEECCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRPKVGLILGGGAARGYAHLGILKRFEEENIPIDFIIGISMGAIIGAIYASGHNVDKLIS
CCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCHHHHHH
DAKKINMLKFLNLLDFKTSQTGLVKGEKIEKYLQVYIKERFEELNIPLYIVATDIHTGKE
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE
VVFSEGDLIKAIRASISIPVIFEPVEYNGTKLVDGSIIDFDAVGLAAKLGADIIIECDVS
EEECCCCHHHHHHHHCCCEEEEEECCCCCCEEECCCEEEHHHHHHHHHCCCCEEEEECCC
SSIDMGVFEKTFYSLANSDKLLPLKKYFNLKRTAPEIISITATTMKLLKDSSNKNSEKTE
CCCCCHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCHHEEHHHHHHHHHHCCCCCCCCHHH
RGKRVYTIKPNVNNIRWYRFDQAGKCINMGFEAADSIVWRIKRELEV
HCCEEEEECCCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]