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The map label for this gene is yfiH [H]

Identifier: 167039726

GI number: 167039726

Start: 1112482

End: 1113408

Strand: Direct

Name: yfiH [H]

Synonym: Teth514_1076

Alternate gene names: 167039726

Gene position: 1112482-1113408 (Clockwise)

Preceding gene: 167039725

Following gene: 167039727

Centisome position: 45.27

GC content: 36.46

Gene sequence:

>927_bases
ATGTATTTAGGATTTTTAACAGTATGTCTTGGGAATATGCCTCTTAAAGAAAAAGCTAAGTGGGCAAGTGAAAATGGGTT
TAAATCACTGGAAATTGCCTGCTGGCCTAAAGACAATACGAGGGATTATTCTGCAAGTGACATAGATGTAGAAAATCTCA
CACCTGAAGAGGCGGAAGAAATAAAAAAATATTTTAAGGAGTACGGGCTCACAATTTCATCTCTTGCATATTATGACAAC
AACCTTGACAGAGACCCAGAAAAGAGAAAGTTTATAAACAATCACTTAAAAAAGTGCATTGATGTAGCTAAAATGCTGGG
GACTGACATGGTGGGGACTTTTGTAGGCAGGAACATTGAAAAAAGCATCAAAGACAATTTTGATGAATTTGAAAGAGTTT
TTACCGATATAGTAAGTTATGCGGAAGACAAAGGAATAAAAATTATAATCGAAAATTGCCCTATGGAAGGATGGCAGGTA
CCTGGCCTTCCAGGAACCATATCTTTTACACCAGAGCTTTGGAAGGAGATGTTTAGAAGGATACCTTCTAAAAACTTTGG
TTTAAATCTTGACCCTTCCCATCTTGTTTGGCAGTTTATAGACTATATAGATGTGATACCAGAGTTTAAAGATAGAATAT
TTCATGTACACGCAAAAGACACAGAAGTGTTTGAGGATAAATTTAAGCGATATGGAGTTTTCAACAGACAGCTTTACACA
GGAACGCATGGCGAATTTGGATACTGGAGATACCGAATGCCAGGTATGGGAAATGTAGATTGGGGCAAGTTTATAAAGGC
GCTAAAAGACAACGGATATGACGGAGTAATAAGCATAGAACATGAAGACCCTCTATATGAAGGCAGTGAAGAGAAAGTTA
AAGAAGGACTTATTTTAGGTCTAAATCATCTAAAACAATTTATATAA

Upstream 100 bases:

>100_bases
ATGGTTAATTGTTGAACAGGATGTGTGTAAAAGACCTCCAATTGAAAGTGTGAAAATTAGTTTTGAAAATTTAAAAAAGA
TTTTAGAGGAGGAAATGTAG

Downstream 100 bases:

>100_bases
CTTTAATAACTTTAAAAAAAGCTCAACCTAATAATCGGTTGGGCTTTTTTTTAATGTAAACATACTGTAAAATATAAGAT
ATACGTTAAGTGATGGGGGA

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MYLGFLTVCLGNMPLKEKAKWASENGFKSLEIACWPKDNTRDYSASDIDVENLTPEEAEEIKKYFKEYGLTISSLAYYDN
NLDRDPEKRKFINNHLKKCIDVAKMLGTDMVGTFVGRNIEKSIKDNFDEFERVFTDIVSYAEDKGIKIIIENCPMEGWQV
PGLPGTISFTPELWKEMFRRIPSKNFGLNLDPSHLVWQFIDYIDVIPEFKDRIFHVHAKDTEVFEDKFKRYGVFNRQLYT
GTHGEFGYWRYRMPGMGNVDWGKFIKALKDNGYDGVISIEHEDPLYEGSEEKVKEGLILGLNHLKQFI

Sequences:

>Translated_308_residues
MYLGFLTVCLGNMPLKEKAKWASENGFKSLEIACWPKDNTRDYSASDIDVENLTPEEAEEIKKYFKEYGLTISSLAYYDN
NLDRDPEKRKFINNHLKKCIDVAKMLGTDMVGTFVGRNIEKSIKDNFDEFERVFTDIVSYAEDKGIKIIIENCPMEGWQV
PGLPGTISFTPELWKEMFRRIPSKNFGLNLDPSHLVWQFIDYIDVIPEFKDRIFHVHAKDTEVFEDKFKRYGVFNRQLYT
GTHGEFGYWRYRMPGMGNVDWGKFIKALKDNGYDGVISIEHEDPLYEGSEEKVKEGLILGLNHLKQFI
>Mature_308_residues
MYLGFLTVCLGNMPLKEKAKWASENGFKSLEIACWPKDNTRDYSASDIDVENLTPEEAEEIKKYFKEYGLTISSLAYYDN
NLDRDPEKRKFINNHLKKCIDVAKMLGTDMVGTFVGRNIEKSIKDNFDEFERVFTDIVSYAEDKGIKIIIENCPMEGWQV
PGLPGTISFTPELWKEMFRRIPSKNFGLNLDPSHLVWQFIDYIDVIPEFKDRIFHVHAKDTEVFEDKFKRYGVFNRQLYT
GTHGEFGYWRYRMPGMGNVDWGKFIKALKDNGYDGVISIEHEDPLYEGSEEKVKEGLILGLNHLKQFI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011418
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2; PF07582 AP_endonuc_2_N [H]

EC number: NA

Molecular weight: Translated: 35870; Mature: 35870

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLGFLTVCLGNMPLKEKAKWASENGFKSLEIACWPKDNTRDYSASDIDVENLTPEEAEE
CCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
IKKYFKEYGLTISSLAYYDNNLDRDPEKRKFINNHLKKCIDVAKMLGTDMVGTFVGRNIE
HHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KSIKDNFDEFERVFTDIVSYAEDKGIKIIIENCPMEGWQVPGLPGTISFTPELWKEMFRR
HHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHH
IPSKNFGLNLDPSHLVWQFIDYIDVIPEFKDRIFHVHAKDTEVFEDKFKRYGVFNRQLYT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCEEEE
GTHGEFGYWRYRMPGMGNVDWGKFIKALKDNGYDGVISIEHEDPLYEGSEEKVKEGLILG
CCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
LNHLKQFI
HHHHHHHC
>Mature Secondary Structure
MYLGFLTVCLGNMPLKEKAKWASENGFKSLEIACWPKDNTRDYSASDIDVENLTPEEAEE
CCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH
IKKYFKEYGLTISSLAYYDNNLDRDPEKRKFINNHLKKCIDVAKMLGTDMVGTFVGRNIE
HHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KSIKDNFDEFERVFTDIVSYAEDKGIKIIIENCPMEGWQVPGLPGTISFTPELWKEMFRR
HHHHCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEECCHHHHHHHHHH
IPSKNFGLNLDPSHLVWQFIDYIDVIPEFKDRIFHVHAKDTEVFEDKFKRYGVFNRQLYT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHCCCCCCEEEE
GTHGEFGYWRYRMPGMGNVDWGKFIKALKDNGYDGVISIEHEDPLYEGSEEKVKEGLILG
CCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHH
LNHLKQFI
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377; 8704981 [H]