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The map label for this gene is ycdX [C]

Identifier: 167039710

GI number: 167039710

Start: 1097960

End: 1098697

Strand: Direct

Name: ycdX [C]

Synonym: Teth514_1060

Alternate gene names: 167039710

Gene position: 1097960-1098697 (Clockwise)

Preceding gene: 167039709

Following gene: 167039711

Centisome position: 44.68

GC content: 35.09

Gene sequence:

>738_bases
TTGAAGTTAGTTTTGGATACTCACACTCACACAATTTCCAGCGGTCACGCTTACAGCACTATTACAGAAAACGCAAGGGA
GGCTTATAAAAAAGGGCTTCAACTTATATGTATGACAGACCACGGACCTAAAATGCCAGGAGCTGCTCACCTTTGGTATT
TTGGAAATTTAAAAGTGTTACCTGAAAAAATAGAGGGGGTGGAGATATTAAAAGGGGTAGAAGTTAATATAATGGATGAA
GAAGGAAATTTGGACTTACCAGAAGGAATACTTAAAAAACTAGATATAGTGATTGCCAGTTTACATGACGTGTGTTTTGA
ACCAAGTGACGATATAGAAAGAAACACAAAAGCTATTATAAATGCTATAAAAAACCCTTATGTAGATATAATAGGACATC
CTGGGAATCCCATCTATCCAATAGATATTGAAAAAGTTTTAATGGCTGCTAAAGAATATGGCAAATTTATTGAAATAAAC
AACAGCTCCTTTGTAAGTTCAAGAAAGGGCAGTGAAGAAAATTGTTTTCTCATTGCTAAAAAAGCGAAAGAAATGGGAGT
AAAAATTGCTGTGGGAAGCGATGCACATGTAAGCTTTGATGTAGGAAGGTTTGAGGAAGCTCTCAAAGTTATTAAGAATG
CCGGTATAACTGAGGATTTAGTGCTTAATACTGATGTTGGAAAAATAAAAGAATATCTTAAAGAGAAAAAACGGAAAATT
GGAGGAGAGGAAGAATGA

Upstream 100 bases:

>100_bases
AGCGATGAACCACAGGCAAAAACAAATGGGATACAACGCTGCTCACGAACTTAACAAAAAATTATTAAAACAAATAGGGA
ATTAAAGGGAGAGGATAAAG

Downstream 100 bases:

>100_bases
GAATTGGTGTTGACCTTGGAGGCACTAATATTGCTGTTGGATTGGTGGATGAAGAGGGACGTATAGTAGCTACAGGTAGC
AGGCCGACAAAACCGGAAAG

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKLVLDTHTHTISSGHAYSTITENAREAYKKGLQLICMTDHGPKMPGAAHLWYFGNLKVLPEKIEGVEILKGVEVNIMDE
EGNLDLPEGILKKLDIVIASLHDVCFEPSDDIERNTKAIINAIKNPYVDIIGHPGNPIYPIDIEKVLMAAKEYGKFIEIN
NSSFVSSRKGSEENCFLIAKKAKEMGVKIAVGSDAHVSFDVGRFEEALKVIKNAGITEDLVLNTDVGKIKEYLKEKKRKI
GGEEE

Sequences:

>Translated_245_residues
MKLVLDTHTHTISSGHAYSTITENAREAYKKGLQLICMTDHGPKMPGAAHLWYFGNLKVLPEKIEGVEILKGVEVNIMDE
EGNLDLPEGILKKLDIVIASLHDVCFEPSDDIERNTKAIINAIKNPYVDIIGHPGNPIYPIDIEKVLMAAKEYGKFIEIN
NSSFVSSRKGSEENCFLIAKKAKEMGVKIAVGSDAHVSFDVGRFEEALKVIKNAGITEDLVLNTDVGKIKEYLKEKKRKI
GGEEE
>Mature_245_residues
MKLVLDTHTHTISSGHAYSTITENAREAYKKGLQLICMTDHGPKMPGAAHLWYFGNLKVLPEKIEGVEILKGVEVNIMDE
EGNLDLPEGILKKLDIVIASLHDVCFEPSDDIERNTKAIINAIKNPYVDIIGHPGNPIYPIDIEKVLMAAKEYGKFIEIN
NSSFVSSRKGSEENCFLIAKKAKEMGVKIAVGSDAHVSFDVGRFEEALKVIKNAGITEDLVLNTDVGKIKEYLKEKKRKI
GGEEE

Specific function: Unknown

COG id: COG1387

COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHP family

Homologues:

Organism=Escherichia coli, GI1787271, Length=232, Percent_Identity=40.948275862069, Blast_Score=193, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1060_THEPX (B0K683)

Other databases:

- EMBL:   CP000923
- RefSeq:   YP_001662695.1
- ProteinModelPortal:   B0K683
- SMR:   B0K683
- GeneID:   5876907
- GenomeReviews:   CP000923_GR
- KEGG:   tex:Teth514_1060
- HOGENOM:   HBG734021
- OMA:   HTIASTH
- ProtClustDB:   PRK09248
- BioCyc:   TSP1755:TETH514_1060-MONOMER
- HAMAP:   MF_01561
- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195
- SMART:   SM00481

Pfam domain/function: PF02811 PHP; SSF89550 PHP-like

EC number: NA

Molecular weight: Translated: 27148; Mature: 27148

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVLDTHTHTISSGHAYSTITENAREAYKKGLQLICMTDHGPKMPGAAHLWYFGNLKVL
CEEEEECCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCEEEC
PEKIEGVEILKGVEVNIMDEEGNLDLPEGILKKLDIVIASLHDVCFEPSDDIERNTKAII
CHHCCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
NAIKNPYVDIIGHPGNPIYPIDIEKVLMAAKEYGKFIEINNSSFVSSRKGSEENCFLIAK
HHHCCCCEEEEECCCCCEEECCHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCEEEEEE
KAKEMGVKIAVGSDAHVSFDVGRFEEALKVIKNAGITEDLVLNTDVGKIKEYLKEKKRKI
CHHHCCEEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHC
GGEEE
CCCCC
>Mature Secondary Structure
MKLVLDTHTHTISSGHAYSTITENAREAYKKGLQLICMTDHGPKMPGAAHLWYFGNLKVL
CEEEEECCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCEEEC
PEKIEGVEILKGVEVNIMDEEGNLDLPEGILKKLDIVIASLHDVCFEPSDDIERNTKAII
CHHCCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
NAIKNPYVDIIGHPGNPIYPIDIEKVLMAAKEYGKFIEINNSSFVSSRKGSEENCFLIAK
HHHCCCCEEEEECCCCCEEECCHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCEEEEEE
KAKEMGVKIAVGSDAHVSFDVGRFEEALKVIKNAGITEDLVLNTDVGKIKEYLKEKKRKI
CHHHCCEEEEECCCCEEEECHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHC
GGEEE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA