Click here to switch to the map view.

The map label for this gene is yisS [H]

Identifier: 167039640

GI number: 167039640

Start: 1019227

End: 1020399

Strand: Direct

Name: yisS [H]

Synonym: Teth514_0988

Alternate gene names: 167039640

Gene position: 1019227-1020399 (Clockwise)

Preceding gene: 167039639

Following gene: 167039641

Centisome position: 41.48

GC content: 36.06

Gene sequence:

>1173_bases
ATGAAAAAACTTAATGTCGGATTAATTGGTGCAGGTTTTATGGCAAAAGCACATGCTATGGCTTATGCAACTATGCCAAT
GTTTTTCTGGCCAGCGCCTGCTATTCCAGTAAGAAAAGTGATTGCTGATATTACAGAAGAAGGTGCTAAAATTGCAGCTG
AGCGATTTGGGTTCGAAAAATATACTTCAGATTGGCGGAAAATTATAGAAGATCCGGAAATAGATATAGTAGATATTGTC
ACGCCTAATGATACTCATGCTGAAATAGCGATAGCTGCTGCTAAAGCAGGAAAACACATTTTTTGTGAGAAACCAATTGC
CCGAACTAGTGAAGAAGCAAAGAAAATGTATGAAGCAGTGACAAATGCGGGTGTAAAAAATATGCTTGCTTTTAATTACA
GGAGAACACCTGCTGTTGCACTTGCAAAGAAGTTTATAGAGGAAGGAGCAATAGGGAAAATTTTAAACTTTAGAGGTACT
TATCTTCAAGATTGGTCAGCAGATCCTTCTTCACCATTATCTTGGAGATTTCAAAAGTCTATTGCAGGTTTAGGAACATT
GGGGGATATTGGAACACATGTAATTGATATTGCAAGATATCTTGTAGGAGAATTTGACGAAGTAGTTTCTATGATGAATA
CTTATATAACAGAAAGACCTATTCAAGAAGGAGTGGTTGATAAGCTTGGGACAGTAAAACTGGAAGGAAGTGTAAAAAAA
GGACCTGTTGATGTAGATGATGAAGCATCTTTCATGATAAAGTTCAAAAACGGAGCTGTTGGGAGTATAGAAGCTACTAG
AAATGGATGGGGCAGAAATAATTTCCTTACATTTGAGATACATGGTGAAAAAGGTTCTATTTTCTTTAATTATGAAAGAA
GAGACGAGTTACAAGTGTATTTTGCAGATGATCCAGTAGATAGGAGAGGTTTTAGAACTATATATACAGGTCCTGCTCAT
CCATATGGTGAAGCTTTATGGCCAATTCCCGCCTTAGGAATCGGATATGGAGAAACAAAGATAATAGAATGTCATGATTT
TATAAAATCAATTATTGAAGATGTAGAAGCGTCACCAAACTTTGAAGATGGTTATAGGATTTCGTTAATATGTGATGCAG
TAGTAAAATCAGCTGAAGAGAAGAGATGGGTAAAAGTAGATTTTGGTAAATAA

Upstream 100 bases:

>100_bases
TCTCAATTTAAAACAAAAAGGAGACAAAAAATTAGTTAAATTAATTAAAAATAAAATTAAAAGTTAAAAAATAAAAAAGA
TTAAAAGGAGTGGTTGTGTT

Downstream 100 bases:

>100_bases
AAATTGTTACAAAATTTGATTTTTCAGTCCCCTTGTAATAAGGGGACTGAAAAATCCTTGATTATAGATTTATTCGAGGT
GTAGAGAAATGAATGAACAG

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKKLNVGLIGAGFMAKAHAMAYATMPMFFWPAPAIPVRKVIADITEEGAKIAAERFGFEKYTSDWRKIIEDPEIDIVDIV
TPNDTHAEIAIAAAKAGKHIFCEKPIARTSEEAKKMYEAVTNAGVKNMLAFNYRRTPAVALAKKFIEEGAIGKILNFRGT
YLQDWSADPSSPLSWRFQKSIAGLGTLGDIGTHVIDIARYLVGEFDEVVSMMNTYITERPIQEGVVDKLGTVKLEGSVKK
GPVDVDDEASFMIKFKNGAVGSIEATRNGWGRNNFLTFEIHGEKGSIFFNYERRDELQVYFADDPVDRRGFRTIYTGPAH
PYGEALWPIPALGIGYGETKIIECHDFIKSIIEDVEASPNFEDGYRISLICDAVVKSAEEKRWVKVDFGK

Sequences:

>Translated_390_residues
MKKLNVGLIGAGFMAKAHAMAYATMPMFFWPAPAIPVRKVIADITEEGAKIAAERFGFEKYTSDWRKIIEDPEIDIVDIV
TPNDTHAEIAIAAAKAGKHIFCEKPIARTSEEAKKMYEAVTNAGVKNMLAFNYRRTPAVALAKKFIEEGAIGKILNFRGT
YLQDWSADPSSPLSWRFQKSIAGLGTLGDIGTHVIDIARYLVGEFDEVVSMMNTYITERPIQEGVVDKLGTVKLEGSVKK
GPVDVDDEASFMIKFKNGAVGSIEATRNGWGRNNFLTFEIHGEKGSIFFNYERRDELQVYFADDPVDRRGFRTIYTGPAH
PYGEALWPIPALGIGYGETKIIECHDFIKSIIEDVEASPNFEDGYRISLICDAVVKSAEEKRWVKVDFGK
>Mature_390_residues
MKKLNVGLIGAGFMAKAHAMAYATMPMFFWPAPAIPVRKVIADITEEGAKIAAERFGFEKYTSDWRKIIEDPEIDIVDIV
TPNDTHAEIAIAAAKAGKHIFCEKPIARTSEEAKKMYEAVTNAGVKNMLAFNYRRTPAVALAKKFIEEGAIGKILNFRGT
YLQDWSADPSSPLSWRFQKSIAGLGTLGDIGTHVIDIARYLVGEFDEVVSMMNTYITERPIQEGVVDKLGTVKLEGSVKK
GPVDVDDEASFMIKFKNGAVGSIEATRNGWGRNNFLTFEIHGEKGSIFFNYERRDELQVYFADDPVDRRGFRTIYTGPAH
PYGEALWPIPALGIGYGETKIIECHDFIKSIIEDVEASPNFEDGYRISLICDAVVKSAEEKRWVKVDFGK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=167, Percent_Identity=35.3293413173653, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787574, Length=394, Percent_Identity=23.8578680203046, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI87081947, Length=203, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789848, Length=205, Percent_Identity=26.3414634146341, Blast_Score=63, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323975, Length=276, Percent_Identity=28.6231884057971, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24581117, Length=218, Percent_Identity=25.2293577981651, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 43441; Mature: 43441

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLNVGLIGAGFMAKAHAMAYATMPMFFWPAPAIPVRKVIADITEEGAKIAAERFGFEK
CCCEEEEEEECCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
YTSDWRKIIEDPEIDIVDIVTPNDTHAEIAIAAAKAGKHIFCEKPIARTSEEAKKMYEAV
HHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEECCCHHCCHHHHHHHHHHH
TNAGVKNMLAFNYRRTPAVALAKKFIEEGAIGKILNFRGTYLQDWSADPSSPLSWRFQKS
HCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCCCCCHHHHHH
IAGLGTLGDIGTHVIDIARYLVGEFDEVVSMMNTYITERPIQEGVVDKLGTVKLEGSVKK
HCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCC
GPVDVDDEASFMIKFKNGAVGSIEATRNGWGRNNFLTFEIHGEKGSIFFNYERRDELQVY
CCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEE
FADDPVDRRGFRTIYTGPAHPYGEALWPIPALGIGYGETKIIECHDFIKSIIEDVEASPN
ECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC
FEDGYRISLICDAVVKSAEEKRWVKVDFGK
CCCCEEEEEEEHHHHHCCCCCCEEEEECCC
>Mature Secondary Structure
MKKLNVGLIGAGFMAKAHAMAYATMPMFFWPAPAIPVRKVIADITEEGAKIAAERFGFEK
CCCEEEEEEECCHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
YTSDWRKIIEDPEIDIVDIVTPNDTHAEIAIAAAKAGKHIFCEKPIARTSEEAKKMYEAV
HHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEEECCCCEEEECCCHHCCHHHHHHHHHHH
TNAGVKNMLAFNYRRTPAVALAKKFIEEGAIGKILNFRGTYLQDWSADPSSPLSWRFQKS
HCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCEEECCCCCCCCCCCHHHHHH
IAGLGTLGDIGTHVIDIARYLVGEFDEVVSMMNTYITERPIQEGVVDKLGTVKLEGSVKK
HCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCEEEECCCCC
GPVDVDDEASFMIKFKNGAVGSIEATRNGWGRNNFLTFEIHGEKGSIFFNYERRDELQVY
CCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEE
FADDPVDRRGFRTIYTGPAHPYGEALWPIPALGIGYGETKIIECHDFIKSIIEDVEASPN
ECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCC
FEDGYRISLICDAVVKSAEEKRWVKVDFGK
CCCCEEEEEEEHHHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]