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The map label for this gene is rbsB [C]

Identifier: 167039639

GI number: 167039639

Start: 1017920

End: 1019098

Strand: Direct

Name: rbsB [C]

Synonym: Teth514_0987

Alternate gene names: 167039639

Gene position: 1017920-1019098 (Clockwise)

Preceding gene: 167039638

Following gene: 167039640

Centisome position: 41.43

GC content: 36.56

Gene sequence:

>1179_bases
ATGAAAAAAATAATGGTGGTGCTTTTAAGCATAATTTTCATTCTTAGTATAGCTTTAGTAGGATGTGGAAAAAGTTCACA
AAGCACACCTAATAACTCTCAAACATCAAATTCATCTACAACGTCACAAAGTGAAACTTCACAAACACAGGACATGGCTG
TTTCTTCTCAAGACCAAGTATTGAGTACTGGTCCGCACGGAGAAAAAGCAACTTTAGCTACAACTTTAAAACTTACAGAT
GAAGAAATTGCAAAAATTAAAGAAGGGCATTATACTGCTGCTATAGTACTGCATTATGCAGGTAATGACTGGTCTACTGC
TCAAGTTGAAGGTTTGAAAGATACCTTTGCTAAATTAGGAATTAAAGTAGTAGCTGTAACTGATGCTAATTTTAAAGCGG
AAAAGCAAGTGTCAGATATTGAAAATGTGTTGGCATTAAAACCAAATATAATAGTAAGTATTCCAGTTGATCCTGTTTCT
ACTGCTCCAGCATACAAAAAAGCTGCTCAACAAGGGGTAAAGTTAGTATTTATGGATAATGTACCAGATGGTTTACAACA
GGGCAAAGATTATGTAAGCGTTGTTTCTGCAGATAATTATGGAAATGGTGTTATAGCTGCAGACATCATGGCAAAAAATT
TAGGATATAAAGGGAAAATTGGAGTAATCTATTATGACGCTAATTTCTTTGTTACAAATCAGAGAGTGGAAGCTTTTGAA
AAAACTATTAAAGAAAAATATCCTGATATCAAAATTGTAGCTCGTGGCGGTTTTACTGATCCTAATGCTGTAGGTTCTGT
AGCGGACGCCATGTTGACAAAACATCCAGATCTTAATGGTATTTTTGCAGTTTGGGATGTTCCTGCAGAGCAAGTAGTAG
CATCTGCAAAAGCAGCAGGAAGGAATGATCTTGTGATTACTACCATCGATTTAGGAAATAATGTTGCTAAGATTATTGCA
GAAGGAGGACTTGTTAAAGGACTCGGAGCTCAAAGACCATATGATCAAGGTGTGGCTGAAGCCACACTGGCAGCTTATGC
GCTTTTAGGAAAGGAAGCTCCTCCTTATGTAGCTGTTCCTGCATTAGCAGTCACTAGAGATAACATTCTTGAAGCTTATA
AACAGGTCTATCATAAAGATCCGCCAGATTTTTTGGTAAATGCAGTTAAAGGGAAATAA

Upstream 100 bases:

>100_bases
TATAATGGGGACCCAGAAGAAGCGGCGATTGAGTCATATAAATACCTGTCTCAGGTATTTAATGAAAATAAATAAAAAAT
AAAAAAAGGGGGAAAGGAAT

Downstream 100 bases:

>100_bases
GATGTATTTTGATTGTTAGCCATTCTTTTCTCAATTTAAAACAAAAAGGAGACAAAAAATTAGTTAAATTAATTAAAAAT
AAAATTAAAAGTTAAAAAAT

Product: sugar ABC transporter periplasmic protein-like protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: ABC-Type Sugar Transport System Periplasmic Component; Ribose ABC Transporter; Sugar ABC Transporter; Transcriptional Regulator LacI Family; Twin-Arginine Translocation Pathway Signal; D-Ribose Transporter Subunit RbsB; Two-Component Sensor Histidine Kinase/Response Regulator; Sugar ABC Transporter Periplasmic Protein; Sugar Uptake ABC Transporter Periplasmic Component; Ribose ABC Transporter Permease; Response Regulator Receiver Protein

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKKIMVVLLSIIFILSIALVGCGKSSQSTPNNSQTSNSSTTSQSETSQTQDMAVSSQDQVLSTGPHGEKATLATTLKLTD
EEIAKIKEGHYTAAIVLHYAGNDWSTAQVEGLKDTFAKLGIKVVAVTDANFKAEKQVSDIENVLALKPNIIVSIPVDPVS
TAPAYKKAAQQGVKLVFMDNVPDGLQQGKDYVSVVSADNYGNGVIAADIMAKNLGYKGKIGVIYYDANFFVTNQRVEAFE
KTIKEKYPDIKIVARGGFTDPNAVGSVADAMLTKHPDLNGIFAVWDVPAEQVVASAKAAGRNDLVITTIDLGNNVAKIIA
EGGLVKGLGAQRPYDQGVAEATLAAYALLGKEAPPYVAVPALAVTRDNILEAYKQVYHKDPPDFLVNAVKGK

Sequences:

>Translated_392_residues
MKKIMVVLLSIIFILSIALVGCGKSSQSTPNNSQTSNSSTTSQSETSQTQDMAVSSQDQVLSTGPHGEKATLATTLKLTD
EEIAKIKEGHYTAAIVLHYAGNDWSTAQVEGLKDTFAKLGIKVVAVTDANFKAEKQVSDIENVLALKPNIIVSIPVDPVS
TAPAYKKAAQQGVKLVFMDNVPDGLQQGKDYVSVVSADNYGNGVIAADIMAKNLGYKGKIGVIYYDANFFVTNQRVEAFE
KTIKEKYPDIKIVARGGFTDPNAVGSVADAMLTKHPDLNGIFAVWDVPAEQVVASAKAAGRNDLVITTIDLGNNVAKIIA
EGGLVKGLGAQRPYDQGVAEATLAAYALLGKEAPPYVAVPALAVTRDNILEAYKQVYHKDPPDFLVNAVKGK
>Mature_392_residues
MKKIMVVLLSIIFILSIALVGCGKSSQSTPNNSQTSNSSTTSQSETSQTQDMAVSSQDQVLSTGPHGEKATLATTLKLTD
EEIAKIKEGHYTAAIVLHYAGNDWSTAQVEGLKDTFAKLGIKVVAVTDANFKAEKQVSDIENVLALKPNIIVSIPVDPVS
TAPAYKKAAQQGVKLVFMDNVPDGLQQGKDYVSVVSADNYGNGVIAADIMAKNLGYKGKIGVIYYDANFFVTNQRVEAFE
KTIKEKYPDIKIVARGGFTDPNAVGSVADAMLTKHPDLNGIFAVWDVPAEQVVASAKAAGRNDLVITTIDLGNNVAKIIA
EGGLVKGLGAQRPYDQGVAEATLAAYALLGKEAPPYVAVPALAVTRDNILEAYKQVYHKDPPDFLVNAVKGK

Specific function: Involved In The High-Affinity D-Ribose Membrane Transport System And Also Serves As The Primary Chemoreceptor For Chemotaxis. [C]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 3940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5900 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 1520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41686; Mature: 41686

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIMVVLLSIIFILSIALVGCGKSSQSTPNNSQTSNSSTTSQSETSQTQDMAVSSQDQV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCE
LSTGPHGEKATLATTLKLTDEEIAKIKEGHYTAAIVLHYAGNDWSTAQVEGLKDTFAKLG
EECCCCCCCEEEEEEEEECHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCC
IKVVAVTDANFKAEKQVSDIENVLALKPNIIVSIPVDPVSTAPAYKKAAQQGVKLVFMDN
EEEEEEECCCCCHHHHHHHHHHHHEECCCEEEEECCCCCCCCHHHHHHHHCCCEEEEECC
VPDGLQQGKDYVSVVSADNYGNGVIAADIMAKNLGYKGKIGVIYYDANFFVTNQRVEAFE
CCHHHHCCCCEEEEEECCCCCCCEEEHHHHHHCCCCCCEEEEEEEECEEEEECHHHHHHH
KTIKEKYPDIKIVARGGFTDPNAVGSVADAMLTKHPDLNGIFAVWDVPAEQVVASAKAAG
HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCC
RNDLVITTIDLGNNVAKIIAEGGLVKGLGAQRPYDQGVAEATLAAYALLGKEAPPYVAVP
CCCEEEEEEECCCHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEC
ALAVTRDNILEAYKQVYHKDPPDFLVNAVKGK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKKIMVVLLSIIFILSIALVGCGKSSQSTPNNSQTSNSSTTSQSETSQTQDMAVSSQDQV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCE
LSTGPHGEKATLATTLKLTDEEIAKIKEGHYTAAIVLHYAGNDWSTAQVEGLKDTFAKLG
EECCCCCCCEEEEEEEEECHHHHHHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHCC
IKVVAVTDANFKAEKQVSDIENVLALKPNIIVSIPVDPVSTAPAYKKAAQQGVKLVFMDN
EEEEEEECCCCCHHHHHHHHHHHHEECCCEEEEECCCCCCCCHHHHHHHHCCCEEEEECC
VPDGLQQGKDYVSVVSADNYGNGVIAADIMAKNLGYKGKIGVIYYDANFFVTNQRVEAFE
CCHHHHCCCCEEEEEECCCCCCCEEEHHHHHHCCCCCCEEEEEEEECEEEEECHHHHHHH
KTIKEKYPDIKIVARGGFTDPNAVGSVADAMLTKHPDLNGIFAVWDVPAEQVVASAKAAG
HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCC
RNDLVITTIDLGNNVAKIIAEGGLVKGLGAQRPYDQGVAEATLAAYALLGKEAPPYVAVP
CCCEEEEEEECCCHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEC
ALAVTRDNILEAYKQVYHKDPPDFLVNAVKGK
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA