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The map label for this gene is ybaF [H]

Identifier: 167039552

GI number: 167039552

Start: 921591

End: 922397

Strand: Direct

Name: ybaF [H]

Synonym: Teth514_0899

Alternate gene names: 167039552

Gene position: 921591-922397 (Clockwise)

Preceding gene: 167039551

Following gene: 167039553

Centisome position: 37.5

GC content: 34.45

Gene sequence:

>807_bases
ATGTTTAGAAATATAACTATTGGGCAATATATCCCTGGTGATTCGGTAGTTCACAAGTTGGATCCGAGAATCAAAATAAT
TATCACTTTTATATTTATAGTAGCCACATTCTTGATAAATAAACTTTCAGGTTACCTTTTTGCGGTTTTTTACCTTTATT
TGATAATAACAATTTCTAAAATACCTTTTAGCTATATTTTAAAAGGGTTAAGACCAGTTATTATAATTCTTTTACTGACA
GTGAGTTTAAACATGTTTTTTACCCCTGGGGGAACGATATTATATACCTTAGGACCATTGAAAATTACTACTACTGGGTT
GCGATTAGCTGTATTTATGGGATTGAGACTTATATTTTTGATTATCGGTACTTCACTACTTACTTTAACTACTTCTCCTA
TCTCTTTGACAGATGGAATAGAGCATATTTTAAAACCCTTTAGCCGTATAGGGGTACCGGCTCATGAGTTAGCAATGATG
ATGACAATTGCTTTAAGATTTATACCTACATTAATAGAAGAAGCAGAAAAAATTATGAAAGCTCAAATGGCAAGAGGAGC
CGATTTTGAAAGTGGCAATATAGTAAAAAGGGCAAAAGGACTAGTGCCTCTTTTAGTACCGCTATTTATCAGTGCTTTCA
GAAGAGCTGACGAATTAGCAGTTGCTATGGAATCTCGGTGCTATAGAGGCGGGCAAAATAGAACGCGAATGAAACAGCTT
AAAATCCAACCGAGAGATTATCAAGCTTTAGCTGTGACCTTGATAATGGTATTGCTAATTGTATGGAATAGAGTTTGGAC
GTGGTAA

Upstream 100 bases:

>100_bases
GCAAGAGAATTACAAAAAAAAGGCGTAGCAATTCCAGAAGATATATTAACAATTGAAGAAGCAAAGGAATATATAGTTCG
TTATCTCAGGGGGACTAAAA

Downstream 100 bases:

>100_bases
AAATGAGAAACGTAATGATTGTAGTAGAATATGACGGGACCAATTATCACGGTTGGCAATACCAAAAGAATGCAGTGACA
GTTCAGGAGGTATTGCAAAA

Product: cobalt transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MFRNITIGQYIPGDSVVHKLDPRIKIIITFIFIVATFLINKLSGYLFAVFYLYLIITISKIPFSYILKGLRPVIIILLLT
VSLNMFFTPGGTILYTLGPLKITTTGLRLAVFMGLRLIFLIIGTSLLTLTTSPISLTDGIEHILKPFSRIGVPAHELAMM
MTIALRFIPTLIEEAEKIMKAQMARGADFESGNIVKRAKGLVPLLVPLFISAFRRADELAVAMESRCYRGGQNRTRMKQL
KIQPRDYQALAVTLIMVLLIVWNRVWTW

Sequences:

>Translated_268_residues
MFRNITIGQYIPGDSVVHKLDPRIKIIITFIFIVATFLINKLSGYLFAVFYLYLIITISKIPFSYILKGLRPVIIILLLT
VSLNMFFTPGGTILYTLGPLKITTTGLRLAVFMGLRLIFLIIGTSLLTLTTSPISLTDGIEHILKPFSRIGVPAHELAMM
MTIALRFIPTLIEEAEKIMKAQMARGADFESGNIVKRAKGLVPLLVPLFISAFRRADELAVAMESRCYRGGQNRTRMKQL
KIQPRDYQALAVTLIMVLLIVWNRVWTW
>Mature_268_residues
MFRNITIGQYIPGDSVVHKLDPRIKIIITFIFIVATFLINKLSGYLFAVFYLYLIITISKIPFSYILKGLRPVIIILLLT
VSLNMFFTPGGTILYTLGPLKITTTGLRLAVFMGLRLIFLIIGTSLLTLTTSPISLTDGIEHILKPFSRIGVPAHELAMM
MTIALRFIPTLIEEAEKIMKAQMARGADFESGNIVKRAKGLVPLLVPLFISAFRRADELAVAMESRCYRGGQNRTRMKQL
KIQPRDYQALAVTLIMVLLIVWNRVWTW

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 30262; Mature: 30262

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNITIGQYIPGDSVVHKLDPRIKIIITFIFIVATFLINKLSGYLFAVFYLYLIITISK
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPFSYILKGLRPVIIILLLTVSLNMFFTPGGTILYTLGPLKITTTGLRLAVFMGLRLIFL
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHH
IIGTSLLTLTTSPISLTDGIEHILKPFSRIGVPAHELAMMMTIALRFIPTLIEEAEKIMK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQMARGADFESGNIVKRAKGLVPLLVPLFISAFRRADELAVAMESRCYRGGQNRTRMKQL
HHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KIQPRDYQALAVTLIMVLLIVWNRVWTW
CCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRNITIGQYIPGDSVVHKLDPRIKIIITFIFIVATFLINKLSGYLFAVFYLYLIITISK
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPFSYILKGLRPVIIILLLTVSLNMFFTPGGTILYTLGPLKITTTGLRLAVFMGLRLIFL
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCEEEEHHHHHHHHHHHHHHHHH
IIGTSLLTLTTSPISLTDGIEHILKPFSRIGVPAHELAMMMTIALRFIPTLIEEAEKIMK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQMARGADFESGNIVKRAKGLVPLLVPLFISAFRRADELAVAMESRCYRGGQNRTRMKQL
HHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
KIQPRDYQALAVTLIMVLLIVWNRVWTW
CCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]