| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039462
Identifier: 167039462
GI number: 167039462
Start: 840794
End: 841882
Strand: Direct
Name: 167039462
Synonym: Teth514_0808
Alternate gene names: NA
Gene position: 840794-841882 (Clockwise)
Preceding gene: 167039461
Following gene: 167039463
Centisome position: 34.22
GC content: 37.92
Gene sequence:
>1089_bases ATGCATAAATTTGGTTTTATAATACATCCTATAGAGTACGAAGATGTAAGCCGCAAGTTTAAAATAATGGAGAAGTTTCC CAAAAGAGTTGTGGAAGGTTTTACAAGACTTCTTCCTCCTATGAAAGTTTCCGAAATAACAGGGGTTAAAAGCGAATATG CTGAGACAGAAGGTTGGTTTGTAGCGGTTCCTTTGACCTCTGAACAAATGTTAAAATTGCCTGAGGGCTATGTTTTAAAT AAAATAATAAAAGCGGTAAAAATTGCAGAAAATTTAGGTGCAGAAGTTGTCGGCTTGGGGGCTATGACCTCTGTTGTAGG AGATGCAGGGATAACAATTGCTAAAAATTCAAACATCGCTGTAACTACTGGTAACAGTTATACAGTCGCTACCGCAGTAG AAGGAGCGGTAAAAGCAGCAGAGATGATGGGTAAAGATGTAAGAGATTCTCATGTCGCTGTAATAGGAGCGACAGGCTCA ATAGGCAAAGTCTGTGCAGAAATTTTATCCCGAGATGCAAAGTACATGACACTTGTAGCACGAAATAAAGAAAAATTGCA AAATTTTAGAGACTATCTTTTAACAAAAACGGGTATGTCTGCTCATATCACTTCAGATATAAAAGAAGCTTTAGAAGATG CGGATATAATAATTACTGTTACAAGTGCAGTAGATACGGTGATAAAGCCTGAATATCTAAAACCCGGGGCTGTTGTATGC GATGTAGCAAGACCGAGAGATGTGTCAAAGGAAGTTGCGGATAAAAGAGATGATGTTTTAGTTATAGAAGGTGGAGTAGT ACAGGTGCCTGGTGATGTAGACTTCCACTTTAACTTTGGCTTTCCACCTAAAACAAGTTATGCATGTATGGCAGAGACAA TGATTCTTGCTATGGAAGGACGAATTGAGAATTATTCATTAGGACGTGATTTGACTGTAGAGCAAGTGGATGAGATATCA AAACTTGCTAAAAAGCATGGGTTTAAATTAGCGGGATTTAGAAGTTTCGAGCGAGAAGTTACAATGGAAAAGATAGAATC TGTGAGAAAAAACGCCAAAAAGAGATTACAAGAGTGGAAATTTGCATAA
Upstream 100 bases:
>100_bases AAACAAGAAGAAATGACACCACAAGATTACGATGAACTTTTGGATAAAATAGGTTTTGAACCAAGAATAGAATATTTACA AAAATAGGGAGGTAATAAAT
Downstream 100 bases:
>100_bases TTTAGACTTGACTTTATTTGTTAACTGATTTATAATAATCCACATGGAAAATTACACAAGCACTGCTGAAGCAGTGCTTG TGTATTAATATTAACATAAA
Product: shikimate/quinate 5-dehydrogenase
Products: NA
Alternate protein names: Dehydrogenase; Aminotransferase Class-III; Ornithine/Acetylornithine Aminotransferase; Dehydrogenase-Like; Class-III Aminotransferase; Dehydrogenase-Like Protein; Aminotransferase; Acyl-ACP Reductase; Acetylornithine Transaminase; Aminotransferase Class-Iii; Shikimate / Quinate 5-Dehydrogenase Domain Protein; Dehydrogenase Like Protein; Pyridoxalphosphate Dependent Aminotransferase Class III; Dehydrogenase Like; Condensation Domain-Containing Protein
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MHKFGFIIHPIEYEDVSRKFKIMEKFPKRVVEGFTRLLPPMKVSEITGVKSEYAETEGWFVAVPLTSEQMLKLPEGYVLN KIIKAVKIAENLGAEVVGLGAMTSVVGDAGITIAKNSNIAVTTGNSYTVATAVEGAVKAAEMMGKDVRDSHVAVIGATGS IGKVCAEILSRDAKYMTLVARNKEKLQNFRDYLLTKTGMSAHITSDIKEALEDADIIITVTSAVDTVIKPEYLKPGAVVC DVARPRDVSKEVADKRDDVLVIEGGVVQVPGDVDFHFNFGFPPKTSYACMAETMILAMEGRIENYSLGRDLTVEQVDEIS KLAKKHGFKLAGFRSFEREVTMEKIESVRKNAKKRLQEWKFA
Sequences:
>Translated_362_residues MHKFGFIIHPIEYEDVSRKFKIMEKFPKRVVEGFTRLLPPMKVSEITGVKSEYAETEGWFVAVPLTSEQMLKLPEGYVLN KIIKAVKIAENLGAEVVGLGAMTSVVGDAGITIAKNSNIAVTTGNSYTVATAVEGAVKAAEMMGKDVRDSHVAVIGATGS IGKVCAEILSRDAKYMTLVARNKEKLQNFRDYLLTKTGMSAHITSDIKEALEDADIIITVTSAVDTVIKPEYLKPGAVVC DVARPRDVSKEVADKRDDVLVIEGGVVQVPGDVDFHFNFGFPPKTSYACMAETMILAMEGRIENYSLGRDLTVEQVDEIS KLAKKHGFKLAGFRSFEREVTMEKIESVRKNAKKRLQEWKFA >Mature_362_residues MHKFGFIIHPIEYEDVSRKFKIMEKFPKRVVEGFTRLLPPMKVSEITGVKSEYAETEGWFVAVPLTSEQMLKLPEGYVLN KIIKAVKIAENLGAEVVGLGAMTSVVGDAGITIAKNSNIAVTTGNSYTVATAVEGAVKAAEMMGKDVRDSHVAVIGATGS IGKVCAEILSRDAKYMTLVARNKEKLQNFRDYLLTKTGMSAHITSDIKEALEDADIIITVTSAVDTVIKPEYLKPGAVVC DVARPRDVSKEVADKRDDVLVIEGGVVQVPGDVDFHFNFGFPPKTSYACMAETMILAMEGRIENYSLGRDLTVEQVDEIS KLAKKHGFKLAGFRSFEREVTMEKIESVRKNAKKRLQEWKFA
Specific function: Unknown
COG id: COG5322
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39890; Mature: 39890
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKFGFIIHPIEYEDVSRKFKIMEKFPKRVVEGFTRLLPPMKVSEITGVKSEYAETEGWF CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCCCCEE VAVPLTSEQMLKLPEGYVLNKIIKAVKIAENLGAEVVGLGAMTSVVGDAGITIAKNSNIA EEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCEE VTTGNSYTVATAVEGAVKAAEMMGKDVRDSHVAVIGATGSIGKVCAEILSRDAKYMTLVA EECCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEC RNKEKLQNFRDYLLTKTGMSAHITSDIKEALEDADIIITVTSAVDTVIKPEYLKPGAVVC CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCEEE DVARPRDVSKEVADKRDDVLVIEGGVVQVPGDVDFHFNFGFPPKTSYACMAETMILAMEG ECCCCCCHHHHHHCCCCCEEEEECCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC RIENYSLGRDLTVEQVDEISKLAKKHGFKLAGFRSFEREVTMEKIESVRKNAKKRLQEWK CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC FA CC >Mature Secondary Structure MHKFGFIIHPIEYEDVSRKFKIMEKFPKRVVEGFTRLLPPMKVSEITGVKSEYAETEGWF CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCCCCEE VAVPLTSEQMLKLPEGYVLNKIIKAVKIAENLGAEVVGLGAMTSVVGDAGITIAKNSNIA EEEECCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCEEEEECCCEE VTTGNSYTVATAVEGAVKAAEMMGKDVRDSHVAVIGATGSIGKVCAEILSRDAKYMTLVA EECCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEC RNKEKLQNFRDYLLTKTGMSAHITSDIKEALEDADIIITVTSAVDTVIKPEYLKPGAVVC CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCCCCCCCCEEE DVARPRDVSKEVADKRDDVLVIEGGVVQVPGDVDFHFNFGFPPKTSYACMAETMILAMEG ECCCCCCHHHHHHCCCCCEEEEECCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC RIENYSLGRDLTVEQVDEISKLAKKHGFKLAGFRSFEREVTMEKIESVRKNAKKRLQEWK CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC FA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA