| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039285
Identifier: 167039285
GI number: 167039285
Start: 651021
End: 652304
Strand: Direct
Name: 167039285
Synonym: Teth514_0626
Alternate gene names: NA
Gene position: 651021-652304 (Clockwise)
Preceding gene: 167039284
Following gene: 167039287
Centisome position: 26.49
GC content: 31.39
Gene sequence:
>1284_bases ATGTTTGAGGTTTTTGAAGATATGTTAAGTCCAGAATATTGGATTAGGAAAATAGACAATACCGACAAAGTTATTATGAC ACAACAAGAGATTGAAAACTTTAACAGAAAGATAATAAATGAGGTAGTTACAGTATATGACCTTGAGACATACAAAAAAA GTTTAAAAAAAGATGAGCTTATTAAGTTAATTAAAAGTTATGAGATGCCTAAAAAGCCTATGTACGATAAGTATGGCAAC CTCATAGAAGAAGACTTTTATGACGATGTAATAAAAAATACGAATTTGGAGGGAATTAAGGATGTAAATCCAGTAAGGTA TGGTATAGCGATTAGAAATACTTCTATAAGAAGTTTTCCTACGAAAGAAGCTGTTTTTGACAAACAAGGAGATATAGAAT TTGATAGGTTTCAAGAGACGGGATGTCAAGCTTTAGAGCCTGTAGTTATTTTACACGAGAGTAAAGACAGAAAATGGTTA TTTATACAGATGTATAATTACAGAGGATGGATTAAAGCAGAAGATATTGCAATTGCGAAAGACAAAAAAGAGTTATTTGA CTATATAAATTCACTAAGTTTTTTAGTAGTCACAGGAAACTATATAAAGACTCAAAGCAATCCCTTTGACAAAAATGTTT CTAAATTGGAATTTACAATGGGGACGAAAATATATCTAGAAGAAGGAAATGTTTTACATCAAGTTGGCAATCAATCAGTT ATTGGACATTATCTTATAAAACTGCCTATTAGAAATGAAGAAAGGAATCTTGAGTTTAGATATGCTCTAATTTCAAAGAA AGAAGATGTAAATGTTGGATATCTTCCCTATACAAGAGAAAACATTTTGAAGCAGGCTTTCAAACTTATAGGTGATAGAT ACGGTTGGGGTGATAGTTTAGGAGGTAGAGATTGTTCTAGTTATATAATGTATATTTTTAAGACTTTTGGCATAAGGCTT CCTAGGAATGCTAATGAGCAAGAAGCAGTAGCGGACAAATCCTATAAATTTATTGAGGGAATGTCAAATGAAGAAAGAAT AAAAGTGTTCGACAGTGTAAAGCCAGGAGCATTAGTCTATATGCCAGGGCATGCTATGATTTACATTGGAAAAGAAAAAG GCATTCCTTATATAATACATAATTTTCATGGGTATGGAGAGAAAAAGGAAGATAAATATGAATTTGTTCCTGTAAATGAA GTTATGGTAACCTCTACTTTTCTGCCGACAACTTCAGGAGTATCTTTTATAGAAAAATTCACTTCTGTTTTGGAAATAGA ATAA
Upstream 100 bases:
>100_bases TCTATAGTATAGACGAAAAACTTCGCTTTTAGTTTCATTTTTTTAAAATTTTTTCTATAAATTTTTGCCTGCTTTTATTG TTTATGAGGGGAGAGTTTGC
Downstream 100 bases:
>100_bases GGGTAAACTAAAAATTTACCCTTATTCTCCATAGGCTTTTCTATATATTTCTGCAATTTCGGATACCAATGGCATTCTTG GGTTTGAACCGGTGCACTGG
Product: NLP/P60 protein
Products: NA
Alternate protein names: Nlp/P60 Protein; NlpC/P60 Family Protein; Lipoprotein; Lipoprotein NLP/P60 Family; DNA Gyrase Subunit A
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MFEVFEDMLSPEYWIRKIDNTDKVIMTQQEIENFNRKIINEVVTVYDLETYKKSLKKDELIKLIKSYEMPKKPMYDKYGN LIEEDFYDDVIKNTNLEGIKDVNPVRYGIAIRNTSIRSFPTKEAVFDKQGDIEFDRFQETGCQALEPVVILHESKDRKWL FIQMYNYRGWIKAEDIAIAKDKKELFDYINSLSFLVVTGNYIKTQSNPFDKNVSKLEFTMGTKIYLEEGNVLHQVGNQSV IGHYLIKLPIRNEERNLEFRYALISKKEDVNVGYLPYTRENILKQAFKLIGDRYGWGDSLGGRDCSSYIMYIFKTFGIRL PRNANEQEAVADKSYKFIEGMSNEERIKVFDSVKPGALVYMPGHAMIYIGKEKGIPYIIHNFHGYGEKKEDKYEFVPVNE VMVTSTFLPTTSGVSFIEKFTSVLEIE
Sequences:
>Translated_427_residues MFEVFEDMLSPEYWIRKIDNTDKVIMTQQEIENFNRKIINEVVTVYDLETYKKSLKKDELIKLIKSYEMPKKPMYDKYGN LIEEDFYDDVIKNTNLEGIKDVNPVRYGIAIRNTSIRSFPTKEAVFDKQGDIEFDRFQETGCQALEPVVILHESKDRKWL FIQMYNYRGWIKAEDIAIAKDKKELFDYINSLSFLVVTGNYIKTQSNPFDKNVSKLEFTMGTKIYLEEGNVLHQVGNQSV IGHYLIKLPIRNEERNLEFRYALISKKEDVNVGYLPYTRENILKQAFKLIGDRYGWGDSLGGRDCSSYIMYIFKTFGIRL PRNANEQEAVADKSYKFIEGMSNEERIKVFDSVKPGALVYMPGHAMIYIGKEKGIPYIIHNFHGYGEKKEDKYEFVPVNE VMVTSTFLPTTSGVSFIEKFTSVLEIE >Mature_427_residues MFEVFEDMLSPEYWIRKIDNTDKVIMTQQEIENFNRKIINEVVTVYDLETYKKSLKKDELIKLIKSYEMPKKPMYDKYGN LIEEDFYDDVIKNTNLEGIKDVNPVRYGIAIRNTSIRSFPTKEAVFDKQGDIEFDRFQETGCQALEPVVILHESKDRKWL FIQMYNYRGWIKAEDIAIAKDKKELFDYINSLSFLVVTGNYIKTQSNPFDKNVSKLEFTMGTKIYLEEGNVLHQVGNQSV IGHYLIKLPIRNEERNLEFRYALISKKEDVNVGYLPYTRENILKQAFKLIGDRYGWGDSLGGRDCSSYIMYIFKTFGIRL PRNANEQEAVADKSYKFIEGMSNEERIKVFDSVKPGALVYMPGHAMIYIGKEKGIPYIIHNFHGYGEKKEDKYEFVPVNE VMVTSTFLPTTSGVSFIEKFTSVLEIE
Specific function: Unknown
COG id: COG0791
COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49868; Mature: 49868
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEVFEDMLSPEYWIRKIDNTDKVIMTQQEIENFNRKIINEVVTVYDLETYKKSLKKDEL CCCHHHHHCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IKLIKSYEMPKKPMYDKYGNLIEEDFYDDVIKNTNLEGIKDVNPVRYGIAIRNTSIRSFP HHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCC TKEAVFDKQGDIEFDRFQETGCQALEPVVILHESKDRKWLFIQMYNYRGWIKAEDIAIAK CHHHHCCCCCCCCHHHHHHCCHHHCCCEEEEECCCCCCEEEEEEECCCCEEEECCEEEEC DKKELFDYINSLSFLVVTGNYIKTQSNPFDKNVSKLEFTMGTKIYLEEGNVLHQVGNQSV CHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCEEEEEECCEEEEECCCCHHHCCCCCE IGHYLIKLPIRNEERNLEFRYALISKKEDVNVGYLPYTRENILKQAFKLIGDRYGWGDSL EEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC GGRDCSSYIMYIFKTFGIRLPRNANEQEAVADKSYKFIEGMSNEERIKVFDSVKPGALVY CCCCHHHHHHHHHHHHCEECCCCCCHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCEEEE MPGHAMIYIGKEKGIPYIIHNFHGYGEKKEDKYEFVPVNEVMVTSTFLPTTSGVSFIEKF ECCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCHHHHHHH TSVLEIE HHHHCCC >Mature Secondary Structure MFEVFEDMLSPEYWIRKIDNTDKVIMTQQEIENFNRKIINEVVTVYDLETYKKSLKKDEL CCCHHHHHCCHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IKLIKSYEMPKKPMYDKYGNLIEEDFYDDVIKNTNLEGIKDVNPVRYGIAIRNTSIRSFP HHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCC TKEAVFDKQGDIEFDRFQETGCQALEPVVILHESKDRKWLFIQMYNYRGWIKAEDIAIAK CHHHHCCCCCCCCHHHHHHCCHHHCCCEEEEECCCCCCEEEEEEECCCCEEEECCEEEEC DKKELFDYINSLSFLVVTGNYIKTQSNPFDKNVSKLEFTMGTKIYLEEGNVLHQVGNQSV CHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCEEEEEECCEEEEECCCCHHHCCCCCE IGHYLIKLPIRNEERNLEFRYALISKKEDVNVGYLPYTRENILKQAFKLIGDRYGWGDSL EEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC GGRDCSSYIMYIFKTFGIRLPRNANEQEAVADKSYKFIEGMSNEERIKVFDSVKPGALVY CCCCHHHHHHHHHHHHCEECCCCCCHHHHHHHCCHHHHHCCCCCCEEEEEECCCCCEEEE MPGHAMIYIGKEKGIPYIIHNFHGYGEKKEDKYEFVPVNEVMVTSTFLPTTSGVSFIEKF ECCCEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCHHHHHHH TSVLEIE HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA