| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is 167039272
Identifier: 167039272
GI number: 167039272
Start: 636172
End: 636816
Strand: Direct
Name: 167039272
Synonym: Teth514_0613
Alternate gene names: NA
Gene position: 636172-636816 (Clockwise)
Preceding gene: 167039271
Following gene: 167039273
Centisome position: 25.89
GC content: 33.33
Gene sequence:
>645_bases ATGAATATAAAGTGGTTGGGTCATTCCTGTTTTAAATTGACATCTGAGAAGGGCACGGTTATTGTTACAGACCCTTTTGA TGAATCAGTTGGGTACCCTATGCCGGATGTAAAAGCAGATATTGTGACATCTTCCCATTCCCATTTTGACCACAATTATT TTAAAGCAGTAAAAGGCAATTTTGACATTGTTGATACAGTAGGAGAGCATAATATAAAAGACATAAAAATAAAAGGTGTA AGCACTTTTCATGATGAGGAGCAGGGGGCAAAAAGAGGTAAAAATATAGTTTTTGTCGTTGATGTTGATGGCATTAAAGT GTGTCACATGGGAGATTTGGGACATGTTTTAACAGAAAAACAAGTTGAAGAAATAGGTTCTGTTGATGTACTACTTATCC CTGTAGGTGGTTATTACACAATTGATTCAAAGCAAGCGGTAGAAGTAATGAATCAGTTAAAGCCAAAAATAACTATTCCA ATGCATTACAAAACAGAGTTTATCAATTTCCCTATTGATACTGTGGACAACTTTTTAAATATGACAAAAGGTAAAAAGAT TTTATCCACAGAAGTGGATATTACTAAAAAAGATTTAGAAGGTGAGCCAAAAGTAATTGCTTTAAATTATCAGTATTCTA TGTAA
Upstream 100 bases:
>100_bases AACGTTTTAGATATATTAAAAATAACTGCACCAGAGAAAATGTAATAGGCGGTTTTCCGCCTATTTTTTGTGGTATAATA TGGATAGGAGGTGTTAATTT
Downstream 100 bases:
>100_bases AAATTTTTTTAAAAATAAATGAATATAAAAAATAAAAAGGGGCAATATAATAGTGTAAGGTTCGTAATGGTCGAGCCAAG ATCATCACAGGACGCAAGTT
Product: Zn-dependent hydrolase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNIKWLGHSCFKLTSEKGTVIVTDPFDESVGYPMPDVKADIVTSSHSHFDHNYFKAVKGNFDIVDTVGEHNIKDIKIKGV STFHDEEQGAKRGKNIVFVVDVDGIKVCHMGDLGHVLTEKQVEEIGSVDVLLIPVGGYYTIDSKQAVEVMNQLKPKITIP MHYKTEFINFPIDTVDNFLNMTKGKKILSTEVDITKKDLEGEPKVIALNYQYSM
Sequences:
>Translated_214_residues MNIKWLGHSCFKLTSEKGTVIVTDPFDESVGYPMPDVKADIVTSSHSHFDHNYFKAVKGNFDIVDTVGEHNIKDIKIKGV STFHDEEQGAKRGKNIVFVVDVDGIKVCHMGDLGHVLTEKQVEEIGSVDVLLIPVGGYYTIDSKQAVEVMNQLKPKITIP MHYKTEFINFPIDTVDNFLNMTKGKKILSTEVDITKKDLEGEPKVIALNYQYSM >Mature_214_residues MNIKWLGHSCFKLTSEKGTVIVTDPFDESVGYPMPDVKADIVTSSHSHFDHNYFKAVKGNFDIVDTVGEHNIKDIKIKGV STFHDEEQGAKRGKNIVFVVDVDGIKVCHMGDLGHVLTEKQVEEIGSVDVLLIPVGGYYTIDSKQAVEVMNQLKPKITIP MHYKTEFINFPIDTVDNFLNMTKGKKILSTEVDITKKDLEGEPKVIALNYQYSM
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0173 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR022877 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 24006; Mature: 24006
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKWLGHSCFKLTSEKGTVIVTDPFDESVGYPMPDVKADIVTSSHSHFDHNYFKAVKGN CCEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCC FDIVDTVGEHNIKDIKIKGVSTFHDEEQGAKRGKNIVFVVDVDGIKVCHMGDLGHVLTEK CEEEECCCCCCCEEEEEECCCCCCCHHHHHHHCCEEEEEEECCCEEEEEECCCHHHHHHH QVEEIGSVDVLLIPVGGYYTIDSKQAVEVMNQLKPKITIPMHYKTEFINFPIDTVDNFLN HHHHHCCCEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHH MTKGKKILSTEVDITKKDLEGEPKVIALNYQYSM HCCCCEEEEEECCEEHHCCCCCCCEEEEEEEECC >Mature Secondary Structure MNIKWLGHSCFKLTSEKGTVIVTDPFDESVGYPMPDVKADIVTSSHSHFDHNYFKAVKGN CCEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCC FDIVDTVGEHNIKDIKIKGVSTFHDEEQGAKRGKNIVFVVDVDGIKVCHMGDLGHVLTEK CEEEECCCCCCCEEEEEECCCCCCCHHHHHHHCCEEEEEEECCCEEEEEECCCHHHHHHH QVEEIGSVDVLLIPVGGYYTIDSKQAVEVMNQLKPKITIPMHYKTEFINFPIDTVDNFLN HHHHHCCCEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEEEEEEEEECCCHHHHHHHHH MTKGKKILSTEVDITKKDLEGEPKVIALNYQYSM HCCCCEEEEEECCEEHHCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11121031 [H]