| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is argS [H]
Identifier: 167039271
GI number: 167039271
Start: 634428
End: 636116
Strand: Direct
Name: argS [H]
Synonym: Teth514_0612
Alternate gene names: 167039271
Gene position: 634428-636116 (Clockwise)
Preceding gene: 167039270
Following gene: 167039272
Centisome position: 25.82
GC content: 37.3
Gene sequence:
>1689_bases TTGGAAAACATTATACAAAAAGTAAAAGATGAAATAAAAGACATGGTGACTACCGCTATAGAGAATTCTGTAAAAGAAGG TTTGATGAATATAGAGGTTATTCCAGAGATAGAAATAGAGGAGCCAAAAGAAAAACAACATGGTGACCTTGCAATAAACA CAGCGATGGTAATAGCAAAGCAGGCTAAAATGCCCCCTAAGAAAATTGCAGAAATCATTGTTTCAAAAGTGGACCCTTCA AATACTTTTATAGAAAAGATTGAAATTGCAGGACCTGGCTTTATCAATTTCTTTTTGAAGGATAAATTTTTGGAAGAAAC TTTAAAGCTCGTTTATGAACGAGGAAAAGATTATGGACGTGTAAATATAGGAAATGGCAAGAAAGTGCAAGTGGAATTTG TATCGGCAAATCCGACGGGTCCTATGCATATGGGAAACGCAAGAGGTGGTGCTTTGGGAGATGCCTTGGCGGCAGTACTT GACTATGCAGGATACGATGTTACAAGAGAATTTTATATAAACGACGCAGGAAATCAAATAGAAAAATTTGGATATTCCCT TGAGGCAAGATACCTGCAATTATTGGGTATACCAGCTGAAGTGCCCGAAGGTGGCTACCAAGGAGAGGACATAATAGATA GAGCGAGAGAATTTTTAGAAATATACGGAGATAAATATAAAGATGTGCCATCAGAAGTGAGAAGAAAGGCACTCATAGAT TATGGACTTAAGAAAAATTTAGAAAAAATAAAAGAGGATTTAGCTCTTTACGGGATAGAATATGACGTGTGGTTTTCTGA GCAATCTCTTTATGACAGCGGAGAAGTGTATAAAGTAATTGAAGAGCTTAAGCAAAAAGGATACACTTATGAAAAAGACG GGGCTTTGTGGTTTAAAATGACATTATTTGGCGCAGAAAAAGACGATGTATTAGTTAGGACCAATGGATTTCCTACATAT CTCGCTTCTGACATAGCCTATCACAAAAATAAATTTATAACTCGCGGATTTGACTGGGTTATAAATGTGTGGGGTGCGGA TCACCATGGCCATGTTGCTCCTATGAAAGGAGCGATGCAGGCACTTGGCATAGACCCTGACAGGCTTGACGTTGTTTTAA TGCAGCTTGTGAAACTCATAGAAGGCGGTCAAGTTGTTAAAATGTCCAAAAGGACAGGCAGAATGGTGACACTACGAGAT CTGATAGATGAAGTAGGGAAAGATGCAGCGCGGTTTTTCTTCAACATGAGGTCTGCAGACAGTTCCATTGATTTTGACCT TGACCTAGCTAAAGAACAGTCAAATGAAAACCCTGTCTTTTATGTCCAGTATGCCCATGCGAGGATTTGCTCCATAATAA GGCAGTTAGAAGAAGAGGGTGTAAAGATAGATAATATAGATGAAGTAGATTTAAGCCTTTTAAAAGAAGAAGAGGAAAAA GAATTAATTAAAAAATTAGCATATTTCCCAGAGGAAATTACCATTGCAGCAAAGACATTGGCACCTCATAGGATTACGAG ATATGTACTTGATGTAGCATCGCTTTTCCATTCTTTTTATAACAGTCACAGAGTAAAAGGCGTAGAAGAAGATTTGATGA AAGCAAGGTATGTGCTTATATTAGCAGTAAAGACTGTCATAAAGAACGTTTTAGATATATTAAAAATAACTGCACCAGAG AAAATGTAA
Upstream 100 bases:
>100_bases GAAGCTGGTGGTGAGATTACTATAAAATATGCCCTTGACCTTAATAACAAGACTGTGAGCGATAATGAACTATACTTAAA AGTGCGGGAGGTAAACTGAT
Downstream 100 bases:
>100_bases TAGGCGGTTTTCCGCCTATTTTTTGTGGTATAATATGGATAGGAGGTGTTAATTTATGAATATAAAGTGGTTGGGTCATT CCTGTTTTAAATTGACATCT
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS [H]
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MENIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQAKMPPKKIAEIIVSKVDPS NTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVL DYAGYDVTREFYINDAGNQIEKFGYSLEARYLQLLGIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALID YGLKKNLEKIKEDLALYGIEYDVWFSEQSLYDSGEVYKVIEELKQKGYTYEKDGALWFKMTLFGAEKDDVLVRTNGFPTY LASDIAYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRD LIDEVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKIDNIDEVDLSLLKEEEEK ELIKKLAYFPEEITIAAKTLAPHRITRYVLDVASLFHSFYNSHRVKGVEEDLMKARYVLILAVKTVIKNVLDILKITAPE KM
Sequences:
>Translated_562_residues MENIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQAKMPPKKIAEIIVSKVDPS NTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVL DYAGYDVTREFYINDAGNQIEKFGYSLEARYLQLLGIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALID YGLKKNLEKIKEDLALYGIEYDVWFSEQSLYDSGEVYKVIEELKQKGYTYEKDGALWFKMTLFGAEKDDVLVRTNGFPTY LASDIAYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRD LIDEVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKIDNIDEVDLSLLKEEEEK ELIKKLAYFPEEITIAAKTLAPHRITRYVLDVASLFHSFYNSHRVKGVEEDLMKARYVLILAVKTVIKNVLDILKITAPE KM >Mature_562_residues MENIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAKQAKMPPKKIAEIIVSKVDPS NTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGRVNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVL DYAGYDVTREFYINDAGNQIEKFGYSLEARYLQLLGIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALID YGLKKNLEKIKEDLALYGIEYDVWFSEQSLYDSGEVYKVIEELKQKGYTYEKDGALWFKMTLFGAEKDDVLVRTNGFPTY LASDIAYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRD LIDEVGKDAARFFFNMRSADSSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKIDNIDEVDLSLLKEEEEK ELIKKLAYFPEEITIAAKTLAPHRITRYVLDVASLFHSFYNSHRVKGVEEDLMKARYVLILAVKTVIKNVLDILKITAPE KM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI15149476, Length=591, Percent_Identity=26.3959390862944, Blast_Score=140, Evalue=2e-33, Organism=Escherichia coli, GI1788184, Length=576, Percent_Identity=26.9097222222222, Blast_Score=149, Evalue=6e-37, Organism=Caenorhabditis elegans, GI71985061, Length=590, Percent_Identity=25.2542372881356, Blast_Score=112, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71985068, Length=549, Percent_Identity=25.6830601092896, Blast_Score=110, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6320548, Length=584, Percent_Identity=25.6849315068493, Blast_Score=138, Evalue=2e-33, Organism=Drosophila melanogaster, GI18859963, Length=567, Percent_Identity=26.1022927689594, Blast_Score=123, Evalue=3e-28,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 [H]
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d [H]
EC number: =6.1.1.19 [H]
Molecular weight: Translated: 63784; Mature: 63784
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHHHH QAKMPPKKIAEIIVSKVDPSNTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGR HCCCCHHHHHHHHHHCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE VNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAGYDVTREFYINDAGNQI EECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHH EKFGYSLEARYLQLLGIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALID HHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH YGLKKNLEKIKEDLALYGIEYDVWFSEQSLYDSGEVYKVIEELKQKGYTYEKDGALWFKM HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEECCCCEEEEE TLFGAEKDDVLVRTNGFPTYLASDIAYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQ EEECCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCCHHHHHH ALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLIDEVGKDAARFFFNMRSAD HHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHCHHHHHHHHHHHCCC SSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKIDNIDEVDLSLLKEEEEK CCCCCCEEEHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHH ELIKKLAYFPEEITIAAKTLAPHRITRYVLDVASLFHSFYNSHRVKGVEEDLMKARYVLI HHHHHHHHCCCHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAVKTVIKNVLDILKITAPEKM HHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MENIIQKVKDEIKDMVTTAIENSVKEGLMNIEVIPEIEIEEPKEKQHGDLAINTAMVIAK CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEHHHHHHHH QAKMPPKKIAEIIVSKVDPSNTFIEKIEIAGPGFINFFLKDKFLEETLKLVYERGKDYGR HCCCCHHHHHHHHHHCCCCCCHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE VNIGNGKKVQVEFVSANPTGPMHMGNARGGALGDALAAVLDYAGYDVTREFYINDAGNQI EECCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCHH EKFGYSLEARYLQLLGIPAEVPEGGYQGEDIIDRAREFLEIYGDKYKDVPSEVRRKALID HHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH YGLKKNLEKIKEDLALYGIEYDVWFSEQSLYDSGEVYKVIEELKQKGYTYEKDGALWFKM HHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCEECCCCEEEEE TLFGAEKDDVLVRTNGFPTYLASDIAYHKNKFITRGFDWVINVWGADHHGHVAPMKGAMQ EEECCCCCCEEEEECCCCHHHHHHHHHHHCCCEECCCEEEEEEECCCCCCCCCCHHHHHH ALGIDPDRLDVVLMQLVKLIEGGQVVKMSKRTGRMVTLRDLIDEVGKDAARFFFNMRSAD HHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHCHHHHHHHHHHHCCC SSIDFDLDLAKEQSNENPVFYVQYAHARICSIIRQLEEEGVKIDNIDEVDLSLLKEEEEK CCCCCCEEEHHCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHH ELIKKLAYFPEEITIAAKTLAPHRITRYVLDVASLFHSFYNSHRVKGVEEDLMKARYVLI HHHHHHHHCCCHHEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LAVKTVIKNVLDILKITAPEKM HHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]