| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
Click here to switch to the map view.
The map label for this gene is yfcE [C]
Identifier: 167039212
GI number: 167039212
Start: 573859
End: 574359
Strand: Direct
Name: yfcE [C]
Synonym: Teth514_0553
Alternate gene names: 167039212
Gene position: 573859-574359 (Clockwise)
Preceding gene: 167039211
Following gene: 167039213
Centisome position: 23.35
GC content: 33.13
Gene sequence:
>501_bases ATGGTTTTAGCAGTTATTAGCGACACACATGGTATATTTGCGCTGGTTAGAAAAAAATTGCGGGAGCTTAAAGGAATAGA TTATCTTATTCATTTAGGAGATAATGCTTCAGATGCTATTCAATTATCTCAAGAGTTTGGGATTCCATTAGAGTATGTTA AAGGGAATTGTGATTTCCCTACAAAAGATGAATTGGAGAAAGTAATTGAAACAGAAGGCCAAAAAATCTTGTTAACTCAT GGACACAGATATTATGTTAAATACGAGTATCAAACGATTTTAGATAGAGGAAGAGAATTGGGAGTAAATGCTGTATTTTT TGGGCATACTCATATTCCTATGATTTCAAAACATGAAGATATTTTACTTTTAAATCCAGGCAGTCCTTCTTTGCCAAGAG AAGGTGCAAAAAAAACTATAGCATTAGTGACAATTGATAAGACTGGTATATTCCCAAGATTAGTGAATTTAGAAGAAGTC TCAGTGCTAAAAGAAGCATAG
Upstream 100 bases:
>100_bases GGCAGAACTTACTATGGAAGAAAAAAATAAGATAAGTCATAGAGCTGATGCTCTTATGAAGTTAAAAAATTATATTTTAA AACGTCTGGAGGAAAAATAA
Downstream 100 bases:
>100_bases AAAACGTAAGAGTGGGGAATTACCCCTCTTATGTTTTCTATACAATTTAATCCAGAAAAAATTTTTAAAACGAGGTGTTG ACAAAGATAAAGGCATCTGA
Product: phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MVLAVISDTHGIFALVRKKLRELKGIDYLIHLGDNASDAIQLSQEFGIPLEYVKGNCDFPTKDELEKVIETEGQKILLTH GHRYYVKYEYQTILDRGRELGVNAVFFGHTHIPMISKHEDILLLNPGSPSLPREGAKKTIALVTIDKTGIFPRLVNLEEV SVLKEA
Sequences:
>Translated_166_residues MVLAVISDTHGIFALVRKKLRELKGIDYLIHLGDNASDAIQLSQEFGIPLEYVKGNCDFPTKDELEKVIETEGQKILLTH GHRYYVKYEYQTILDRGRELGVNAVFFGHTHIPMISKHEDILLLNPGSPSLPREGAKKTIALVTIDKTGIFPRLVNLEEV SVLKEA >Mature_166_residues MVLAVISDTHGIFALVRKKLRELKGIDYLIHLGDNASDAIQLSQEFGIPLEYVKGNCDFPTKDELEKVIETEGQKILLTH GHRYYVKYEYQTILDRGRELGVNAVFFGHTHIPMISKHEDILLLNPGSPSLPREGAKKTIALVTIDKTGIFPRLVNLEEV SVLKEA
Specific function: Unknown
COG id: COG0622
COG function: function code R; Predicted phosphoesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR020935 - InterPro: IPR000979 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 18665; Mature: 18665
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLAVISDTHGIFALVRKKLRELKGIDYLIHLGDNASDAIQLSQEFGIPLEYVKGNCDFP CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHEEEHHHCCCEEEEEECCCCCC TKDELEKVIETEGQKILLTHGHRYYVKYEYQTILDRGRELGVNAVFFGHTHIPMISKHED CHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHCCHHCCCEEEEECCCCCCEECCCCC ILLLNPGSPSLPREGAKKTIALVTIDKTGIFPRLVNLEEVSVLKEA EEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEECCHHHHHHHHCC >Mature Secondary Structure MVLAVISDTHGIFALVRKKLRELKGIDYLIHLGDNASDAIQLSQEFGIPLEYVKGNCDFP CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHEEEHHHCCCEEEEEECCCCCC TKDELEKVIETEGQKILLTHGHRYYVKYEYQTILDRGRELGVNAVFFGHTHIPMISKHED CHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHCCHHCCCEEEEECCCCCCEECCCCC ILLLNPGSPSLPREGAKKTIALVTIDKTGIFPRLVNLEEVSVLKEA EEEECCCCCCCCCCCCCCEEEEEEEECCCCCCEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]