Definition Thermoanaerobacter sp. X514 chromosome, complete genome.
Accession NC_010320
Length 2,457,259

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The map label for this gene is abgA [C]

Identifier: 167039187

GI number: 167039187

Start: 544585

End: 545757

Strand: Direct

Name: abgA [C]

Synonym: Teth514_0528

Alternate gene names: 167039187

Gene position: 544585-545757 (Clockwise)

Preceding gene: 167039186

Following gene: 167039188

Centisome position: 22.16

GC content: 36.15

Gene sequence:

>1173_bases
ATGGATATTCTCAAAGAAGCTGAAAAAGTAGAAAAAGAAGTAATAGAATTAAGGCGAAAAATACACATGTACCCTGAATT
AGGTTTTGAAGAAACAAAAACTTCTGAAATTGTTTATGATTATTTAAAAAATTTAGGGATTGAAGTAAAGAGAATTGCTA
AAACTGGCGTTGTGGGTACCCTTAAAGGCAATGGAAGCAAAACGATAGCTATAAGAGCAGATATGGACGCTCTTCCAATT
CAAGAAGAAAATGATGTAGAATATGCATCGCAGATTCCAGGAAGAATGCATGCTTGTGGGCATGATGTTCATACAGCTAT
ACTTCTTGGTACTGCTAAACTTTTGGCAAATATGAGAGATAAGTTAAAGGGAAATGTTAAGTTTATATTTCAACCAGCGG
AAGAAACAACGGGGGGAGCTCTTCCGTTGATTGAAGAAGGGGTTTTAGAAAATCCTAAAGTTGATGCTATAATAGGACTA
CATGTAGACCCAGAACTTCAAGTTGGGCAAATAGGGATAACCTATGGAAAAGCCTATGCTTCATCAGATATGTTTGACAT
AATTGTAAAAGGCAAAAGCAGTCATGGGGCTGAGCCTCATAAATCGGTGGATTCCATAGTGATTGCTGCTAATATTGTAA
ATATGCTCCAAACTGTTGTTAGCAGAAAAGCTAATCCATTAAGCCCTCTAGTGCTAACTATTGGGACTATTGAAGGAGGA
TATGCACGAAATATAATAGCGAACAAAGTGAGGATGTCTGGAATTATAAGAATGATGGAAGAAGAAAAAAGAGACGAGAT
AGTTGAGATGGTGGAGAAGATTTGCGATAACACAGCAAAAGCTATGGGAGGAGAAGTAGAATTTAAAAGAACGATAGGGT
ATCCTTGCCTTGTAAATCACAAAGGTATGACAGACCTCATAAAAGAAACTGCTTTTCCTTTGCTAGGGGAAAGTAATGTA
ATAGAAGTGGCACCAACAATGGGAGTAGAAGATTTCGCTTATTTCTTGCAAAAAGTCCCTGGCAGTTTTTATAAATTAGG
GTGTGGCAATAAAGAAAAAGGAATAGATAAACCTATACATAACAACCAATTTAATATCGATGAGGAGTGTATTAAAATTG
GCCTTGCTGTACACGTCTCTACAGTTTTAAAATATTTAAACTCAAATGGTTAA

Upstream 100 bases:

>100_bases
GATAATTTTATCAAAACGGCAGAAATGCTATTAGGCGAGAAAATTGAGAATGTTTTGCATGTAGACATAGAAAAATATTA
AAAAACAGGTGGGATTTAGG

Downstream 100 bases:

>100_bases
AAAATTTTTTGAAGGATTAAAAAATATTTGGAAAAAATGGCGGGGATTTATTTATAAATATTCTTTTAAAACTTACGAAA
AAGGTTTACTGCAGTTTTAT

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGTLKGNGSKTIAIRADMDALPI
QEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRDKLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGL
HVDPELQVGQIGITYGKAYASSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG
YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNHKGMTDLIKETAFPLLGESNV
IEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIHNNQFNIDEECIKIGLAVHVSTVLKYLNSNG

Sequences:

>Translated_390_residues
MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGTLKGNGSKTIAIRADMDALPI
QEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRDKLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGL
HVDPELQVGQIGITYGKAYASSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG
YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNHKGMTDLIKETAFPLLGESNV
IEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIHNNQFNIDEECIKIGLAVHVSTVLKYLNSNG
>Mature_390_residues
MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGTLKGNGSKTIAIRADMDALPI
QEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRDKLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGL
HVDPELQVGQIGITYGKAYASSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG
YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNHKGMTDLIKETAFPLLGESNV
IEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIHNNQFNIDEECIKIGLAVHVSTVLKYLNSNG

Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=429, Percent_Identity=24.4755244755245, Blast_Score=95, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 42822; Mature: 42822

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHCCCEEE
LKGNGSKTIAIRADMDALPIQEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRD
EECCCCEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
KLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGLHVDPELQVGQIGITYGKAYA
HHCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCEECEEEEEECHHHC
SSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCEEECC
KGMTDLIKETAFPLLGESNVIEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIH
CCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
NNQFNIDEECIKIGLAVHVSTVLKYLNSNG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGT
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHCCCEEE
LKGNGSKTIAIRADMDALPIQEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRD
EECCCCEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
KLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGLHVDPELQVGQIGITYGKAYA
HHCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCEECEEEEEECHHHC
SSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCEEECC
KGMTDLIKETAFPLLGESNVIEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIH
CCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC
NNQFNIDEECIKIGLAVHVSTVLKYLNSNG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]