| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is abgA [C]
Identifier: 167039187
GI number: 167039187
Start: 544585
End: 545757
Strand: Direct
Name: abgA [C]
Synonym: Teth514_0528
Alternate gene names: 167039187
Gene position: 544585-545757 (Clockwise)
Preceding gene: 167039186
Following gene: 167039188
Centisome position: 22.16
GC content: 36.15
Gene sequence:
>1173_bases ATGGATATTCTCAAAGAAGCTGAAAAAGTAGAAAAAGAAGTAATAGAATTAAGGCGAAAAATACACATGTACCCTGAATT AGGTTTTGAAGAAACAAAAACTTCTGAAATTGTTTATGATTATTTAAAAAATTTAGGGATTGAAGTAAAGAGAATTGCTA AAACTGGCGTTGTGGGTACCCTTAAAGGCAATGGAAGCAAAACGATAGCTATAAGAGCAGATATGGACGCTCTTCCAATT CAAGAAGAAAATGATGTAGAATATGCATCGCAGATTCCAGGAAGAATGCATGCTTGTGGGCATGATGTTCATACAGCTAT ACTTCTTGGTACTGCTAAACTTTTGGCAAATATGAGAGATAAGTTAAAGGGAAATGTTAAGTTTATATTTCAACCAGCGG AAGAAACAACGGGGGGAGCTCTTCCGTTGATTGAAGAAGGGGTTTTAGAAAATCCTAAAGTTGATGCTATAATAGGACTA CATGTAGACCCAGAACTTCAAGTTGGGCAAATAGGGATAACCTATGGAAAAGCCTATGCTTCATCAGATATGTTTGACAT AATTGTAAAAGGCAAAAGCAGTCATGGGGCTGAGCCTCATAAATCGGTGGATTCCATAGTGATTGCTGCTAATATTGTAA ATATGCTCCAAACTGTTGTTAGCAGAAAAGCTAATCCATTAAGCCCTCTAGTGCTAACTATTGGGACTATTGAAGGAGGA TATGCACGAAATATAATAGCGAACAAAGTGAGGATGTCTGGAATTATAAGAATGATGGAAGAAGAAAAAAGAGACGAGAT AGTTGAGATGGTGGAGAAGATTTGCGATAACACAGCAAAAGCTATGGGAGGAGAAGTAGAATTTAAAAGAACGATAGGGT ATCCTTGCCTTGTAAATCACAAAGGTATGACAGACCTCATAAAAGAAACTGCTTTTCCTTTGCTAGGGGAAAGTAATGTA ATAGAAGTGGCACCAACAATGGGAGTAGAAGATTTCGCTTATTTCTTGCAAAAAGTCCCTGGCAGTTTTTATAAATTAGG GTGTGGCAATAAAGAAAAAGGAATAGATAAACCTATACATAACAACCAATTTAATATCGATGAGGAGTGTATTAAAATTG GCCTTGCTGTACACGTCTCTACAGTTTTAAAATATTTAAACTCAAATGGTTAA
Upstream 100 bases:
>100_bases GATAATTTTATCAAAACGGCAGAAATGCTATTAGGCGAGAAAATTGAGAATGTTTTGCATGTAGACATAGAAAAATATTA AAAAACAGGTGGGATTTAGG
Downstream 100 bases:
>100_bases AAAATTTTTTGAAGGATTAAAAAATATTTGGAAAAAATGGCGGGGATTTATTTATAAATATTCTTTTAAAACTTACGAAA AAGGTTTACTGCAGTTTTAT
Product: amidohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGTLKGNGSKTIAIRADMDALPI QEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRDKLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGL HVDPELQVGQIGITYGKAYASSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNHKGMTDLIKETAFPLLGESNV IEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIHNNQFNIDEECIKIGLAVHVSTVLKYLNSNG
Sequences:
>Translated_390_residues MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGTLKGNGSKTIAIRADMDALPI QEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRDKLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGL HVDPELQVGQIGITYGKAYASSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNHKGMTDLIKETAFPLLGESNV IEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIHNNQFNIDEECIKIGLAVHVSTVLKYLNSNG >Mature_390_residues MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGTLKGNGSKTIAIRADMDALPI QEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRDKLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGL HVDPELQVGQIGITYGKAYASSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNHKGMTDLIKETAFPLLGESNV IEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIHNNQFNIDEECIKIGLAVHVSTVLKYLNSNG
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=429, Percent_Identity=24.4755244755245, Blast_Score=95, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: NA
Molecular weight: Translated: 42822; Mature: 42822
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGT CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHCCCEEE LKGNGSKTIAIRADMDALPIQEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRD EECCCCEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHH KLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGLHVDPELQVGQIGITYGKAYA HHCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCEECEEEEEECHHHC SSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCEEECC KGMTDLIKETAFPLLGESNVIEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIH CCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC NNQFNIDEECIKIGLAVHVSTVLKYLNSNG CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDILKEAEKVEKEVIELRRKIHMYPELGFEETKTSEIVYDYLKNLGIEVKRIAKTGVVGT CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHCCCEEE LKGNGSKTIAIRADMDALPIQEENDVEYASQIPGRMHACGHDVHTAILLGTAKLLANMRD EECCCCEEEEEEECCCCCCCCCCCCCHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHH KLKGNVKFIFQPAEETTGGALPLIEEGVLENPKVDAIIGLHVDPELQVGQIGITYGKAYA HHCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCEECEEEEEECHHHC SSDMFDIIVKGKSSHGAEPHKSVDSIVIAANIVNMLQTVVSRKANPLSPLVLTIGTIEGG CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC YARNIIANKVRMSGIIRMMEEEKRDEIVEMVEKICDNTAKAMGGEVEFKRTIGYPCLVNH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCEEECC KGMTDLIKETAFPLLGESNVIEVAPTMGVEDFAYFLQKVPGSFYKLGCGNKEKGIDKPIH CCHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC NNQFNIDEECIKIGLAVHVSTVLKYLNSNG CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]