| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is murI [H]
Identifier: 167039186
GI number: 167039186
Start: 543771
End: 544565
Strand: Direct
Name: murI [H]
Synonym: Teth514_0527
Alternate gene names: 167039186
Gene position: 543771-544565 (Clockwise)
Preceding gene: 167039185
Following gene: 167039187
Centisome position: 22.13
GC content: 31.57
Gene sequence:
>795_bases ATGGACTTACGACCAATAGGCATTTTTGACTCCGGAGTGGGAGGACTTACAGTACTAAAAAGACTTGTTGAGGTTTTACC TGGAGAAGATTATATTTACTTTGGTGATACAAAAAGAGTTCCCTATGGCGATAGAAGTGAAGAAGAGATAAAAAAATTTG CAAAACAGATTTTAAATTTTATGAGAGAGCAAAAAGTAAAAGCTGTAGTAATAGCTTGTAATACTACTTGTGCAGTTATA AATAAAAGCGAATATGATGTAGTTCTTTTTGATGTTTTAAAAGCAGGGGCAGAGAGCGCTGCCCTATACACTATAAATAA AAAAATAGGTGTTATTGCAACTACAAGAACTGTTGAAAGCAAAAGCTATGAAAAGAATATAAAAATTATTGATAAAAATA TTGAAGTTTACCAAAAGGCATGTCCTGAGTTTGTCCCACTTATTGAAAAAGGGCTATATAATTCGCCAATAGCCTATGAA ACTGCTAGCAAGTGTTTAAAAGAATTGAAAGAAAAAGATATAGATACTCTTGTTTTAGGTTGTACCCATTATCCTTTAAT GGCTTCAGTTATAGAAGAGATAATGGGGGAAAATGTAAAAATAGTAGACCCTGCAATTAAATTAGCCTATGATGTGAAAG ATTATTTATTAAAGAAAGATTTATTAAATCCTCAAATCAGGGGTAAGGCGGAATTTTTTGTAAGTGGAGATAAAGATAAT TTTATCAAAACGGCAGAAATGCTATTAGGCGAGAAAATTGAGAATGTTTTGCATGTAGACATAGAAAAATATTAA
Upstream 100 bases:
>100_bases TTTTCAATTTTGTACAGAAAATAAGTAATGAATTATGATATAAATAACTACCATGGTGTATATAATTAATTGACTTAAAT TTTTATTAGGATGTGATGAA
Downstream 100 bases:
>100_bases AAAACAGGTGGGATTTAGGATGGATATTCTCAAAGAAGCTGAAAAAGTAGAAAAAGAAGTAATAGAATTAAGGCGAAAAA TACACATGTACCCTGAATTA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MDLRPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMREQKVKAVVIACNTTCAVI NKSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYE TASKCLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFVSGDKDN FIKTAEMLLGEKIENVLHVDIEKY
Sequences:
>Translated_264_residues MDLRPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMREQKVKAVVIACNTTCAVI NKSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYE TASKCLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFVSGDKDN FIKTAEMLLGEKIENVLHVDIEKY >Mature_264_residues MDLRPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNFMREQKVKAVVIACNTTCAVI NKSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVESKSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYE TASKCLKELKEKDIDTLVLGCTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFVSGDKDN FIKTAEMLLGEKIENVLHVDIEKY
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=225, Percent_Identity=30.6666666666667, Blast_Score=87, Evalue=9e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29746; Mature: 29746
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNF CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH MREQKVKAVVIACNTTCAVINKSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVES HHHCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCC KSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETASKCLKELKEKDIDTLVLG CCHHCCCEEEECCHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC CTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFVSGDKDN CCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCH FIKTAEMLLGEKIENVLHVDIEKY HHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MDLRPIGIFDSGVGGLTVLKRLVEVLPGEDYIYFGDTKRVPYGDRSEEEIKKFAKQILNF CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHH MREQKVKAVVIACNTTCAVINKSEYDVVLFDVLKAGAESAALYTINKKIGVIATTRTVES HHHCCCEEEEEEECCEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCEEEEEEEEECCC KSYEKNIKIIDKNIEVYQKACPEFVPLIEKGLYNSPIAYETASKCLKELKEKDIDTLVLG CCHHCCCEEEECCHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEC CTHYPLMASVIEEIMGENVKIVDPAIKLAYDVKDYLLKKDLLNPQIRGKAEFFVSGDKDN CCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCH FIKTAEMLLGEKIENVLHVDIEKY HHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA