| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is nagE [H]
Identifier: 167039073
GI number: 167039073
Start: 423268
End: 424668
Strand: Direct
Name: nagE [H]
Synonym: Teth514_0412
Alternate gene names: 167039073
Gene position: 423268-424668 (Clockwise)
Preceding gene: 167039072
Following gene: 167039074
Centisome position: 17.23
GC content: 39.54
Gene sequence:
>1401_bases ATGAAGTGGTTAGCAAGTGTTCAAAAACTTGGTAAAGCCTTAATGCTTCCAGTTGCAGTTTTACCTGCAGCAGCATTGCT TTTAAGGCTTGGAGCACCTGATGTTTTCAACATTCCTTTTATCATGCAGGCAGGTGCAGCGGTATTTGACAATTTACCCC TCATCTTTGCTATAGGTATTGCAATAGGTTTTGCAGAAGGGGACGGAGTTGCGGCTCTTGCTGCAGCGGTAGGCTATTTT GTACTGACAAAAGGTGCTACCACAATAAACAAAGACATCAATATGGGTGTTTTAGGCGGTATATTGATGGGTATCATCGC AGGTTATTTGTATAACAAATACCATGATATTAAACTTCCTGATTTCTTAGGTTTCTTTGGAGGAAAGAGATTTGTTCCAA TTGTAACGGCATTTGCTGCAATTGTACTGGCACTTGTGATGGGGTATGTATGGCCTCCAATACAGAATGGCATATATGCG CTTGGTGAGTGGATAATTGGCGCAGGAGCACTTGGAGTATTTGTATACGGTGTGCTAAATAGGCTTTTGATTCCTTTTGG ACTTCATCACGTTATAAACAGTCTTGTCTGGTTTGTTTTTGGTACATTTAAGACAGCAGCTGGCGAAGTTTTAACTGGCG ATTTAAACAGGTTCTTTGCAGGAGACCCGACTGCAGGTATCTTTATGGCCGGATTTTATCCGATTATGATGTTTGGACTT CCAGCAGCAGCACTGGCTATGTGGGCAGCAGCTAGGCCGAATCAAAGAAAAGTTGTGTCTGGTGTGTTAATAAGTGCAGC TCTTACAGCCCTTTTAACGGGTATTACTGAACCCATCGAATTTGCATTTATGTTCTTGGCACCAGTACTTTATGTCATAC ACGCCCTTTTGACAGGTTTGTCTCTCACTATAACTTATATTCTTGGAATAAAAGCTGGTTTTGGTTTTTCGGCTGGTCTT ATTGACTATGTATTAAGCTATGGCATATCTACCAAACCGCTCTTACTTCTTTTGATAGGTATCATATACGGAGCAATATA CTATGTAATTTTCTATTACGTAATAGTAAAATTCAATTTGCCAACTCCTGGCAGATTAGAAGAAGAAGCAACAGATCAGT ATAAAGAATTGTCAAAATCAGAAATTGGAGGTATTGCTGCACAATACGTAGAGGTATTGGGTGGAGCAGAAAATATACAG TCTTTGGAGGCTTGCATAACAAGATTGCGCTTGACTGTAAAAGACGATACAATAATAGACGATGATAAACTTAAAAAGTT AGGGGCGACAGGCGTAATGAGAATGGGCAAAAATGCATTGCAAGTAATTGTTGGTACAAAAGCTGATTTGATTGCACAAG AAATGAAAAAACACATGAAAAAAGCAGGAGGTAAAATTTAA
Upstream 100 bases:
>100_bases GTGTTACTGCAAAAGCAGGCATGAGCCGGTTGAGGTGTTATTACCTTGCCGGCTCTTTTTGTATTAAATGCCTGAAAAAT AAAAATAAGGAGGTTTTTGT
Downstream 100 bases:
>100_bases GGTGAAAATGTTTTAGGCGGCCGTAAACTGGCCGCCATCAAAATTATTTTAAGAAGTTTGAAATATATGGGTATAATAAG ATATTATTAAAATACAGAAA
Product: PTS system, N-acetylglucosamine-specific IIBC subunit
Products: NA
Alternate protein names: EIICBA-Nag; EII-Nag; N-acetylglucosamine permease IIC component; PTS system N-acetylglucosamine-specific EIIC component; N-acetylglucosamine-specific phosphotransferase enzyme IIB component; PTS system N-acetylglucosamine-specific EIIB component; N-acetylglucosamine-specific phosphotransferase enzyme IIA component; PTS system N-acetylglucosamine-specific EIIA component [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKWLASVQKLGKALMLPVAVLPAAALLLRLGAPDVFNIPFIMQAGAAVFDNLPLIFAIGIAIGFAEGDGVAALAAAVGYF VLTKGATTINKDINMGVLGGILMGIIAGYLYNKYHDIKLPDFLGFFGGKRFVPIVTAFAAIVLALVMGYVWPPIQNGIYA LGEWIIGAGALGVFVYGVLNRLLIPFGLHHVINSLVWFVFGTFKTAAGEVLTGDLNRFFAGDPTAGIFMAGFYPIMMFGL PAAALAMWAAARPNQRKVVSGVLISAALTALLTGITEPIEFAFMFLAPVLYVIHALLTGLSLTITYILGIKAGFGFSAGL IDYVLSYGISTKPLLLLLIGIIYGAIYYVIFYYVIVKFNLPTPGRLEEEATDQYKELSKSEIGGIAAQYVEVLGGAENIQ SLEACITRLRLTVKDDTIIDDDKLKKLGATGVMRMGKNALQVIVGTKADLIAQEMKKHMKKAGGKI
Sequences:
>Translated_466_residues MKWLASVQKLGKALMLPVAVLPAAALLLRLGAPDVFNIPFIMQAGAAVFDNLPLIFAIGIAIGFAEGDGVAALAAAVGYF VLTKGATTINKDINMGVLGGILMGIIAGYLYNKYHDIKLPDFLGFFGGKRFVPIVTAFAAIVLALVMGYVWPPIQNGIYA LGEWIIGAGALGVFVYGVLNRLLIPFGLHHVINSLVWFVFGTFKTAAGEVLTGDLNRFFAGDPTAGIFMAGFYPIMMFGL PAAALAMWAAARPNQRKVVSGVLISAALTALLTGITEPIEFAFMFLAPVLYVIHALLTGLSLTITYILGIKAGFGFSAGL IDYVLSYGISTKPLLLLLIGIIYGAIYYVIFYYVIVKFNLPTPGRLEEEATDQYKELSKSEIGGIAAQYVEVLGGAENIQ SLEACITRLRLTVKDDTIIDDDKLKKLGATGVMRMGKNALQVIVGTKADLIAQEMKKHMKKAGGKI >Mature_466_residues MKWLASVQKLGKALMLPVAVLPAAALLLRLGAPDVFNIPFIMQAGAAVFDNLPLIFAIGIAIGFAEGDGVAALAAAVGYF VLTKGATTINKDINMGVLGGILMGIIAGYLYNKYHDIKLPDFLGFFGGKRFVPIVTAFAAIVLALVMGYVWPPIQNGIYA LGEWIIGAGALGVFVYGVLNRLLIPFGLHHVINSLVWFVFGTFKTAAGEVLTGDLNRFFAGDPTAGIFMAGFYPIMMFGL PAAALAMWAAARPNQRKVVSGVLISAALTALLTGITEPIEFAFMFLAPVLYVIHALLTGLSLTITYILGIKAGFGFSAGL IDYVLSYGISTKPLLLLLIGIIYGAIYYVIFYYVIVKFNLPTPGRLEEEATDQYKELSKSEIGGIAAQYVEVLGGAENIQ SLEACITRLRLTVKDDTIIDDDKLKKLGATGVMRMGKNALQVIVGTKADLIAQEMKKHMKKAGGKI
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=464, Percent_Identity=56.6810344827586, Blast_Score=489, Evalue=1e-139, Organism=Escherichia coli, GI1787343, Length=478, Percent_Identity=46.0251046025105, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI1787908, Length=512, Percent_Identity=38.4765625, Blast_Score=300, Evalue=1e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010974 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 49845; Mature: 49845
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLASVQKLGKALMLPVAVLPAAALLLRLGAPDVFNIPFIMQAGAAVFDNLPLIFAIGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHH AIGFAEGDGVAALAAAVGYFVLTKGATTINKDINMGVLGGILMGIIAGYLYNKYHDIKLP HHHCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH DFLGFFGGKRFVPIVTAFAAIVLALVMGYVWPPIQNGIYALGEWIIGAGALGVFVYGVLN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLIPFGLHHVINSLVWFVFGTFKTAAGEVLTGDLNRFFAGDPTAGIFMAGFYPIMMFGL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHC PAAALAMWAAARPNQRKVVSGVLISAALTALLTGITEPIEFAFMFLAPVLYVIHALLTGL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SLTITYILGIKAGFGFSAGLIDYVLSYGISTKPLLLLLIGIIYGAIYYVIFYYVIVKFNL HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTPGRLEEEATDQYKELSKSEIGGIAAQYVEVLGGAENIQSLEACITRLRLTVKDDTIID CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCC DDKLKKLGATGVMRMGKNALQVIVGTKADLIAQEMKKHMKKAGGKI HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKWLASVQKLGKALMLPVAVLPAAALLLRLGAPDVFNIPFIMQAGAAVFDNLPLIFAIGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHCCHHHHHHHH AIGFAEGDGVAALAAAVGYFVLTKGATTINKDINMGVLGGILMGIIAGYLYNKYHDIKLP HHHCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCH DFLGFFGGKRFVPIVTAFAAIVLALVMGYVWPPIQNGIYALGEWIIGAGALGVFVYGVLN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLIPFGLHHVINSLVWFVFGTFKTAAGEVLTGDLNRFFAGDPTAGIFMAGFYPIMMFGL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHC PAAALAMWAAARPNQRKVVSGVLISAALTALLTGITEPIEFAFMFLAPVLYVIHALLTGL CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH SLTITYILGIKAGFGFSAGLIDYVLSYGISTKPLLLLLIGIIYGAIYYVIFYYVIVKFNL HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTPGRLEEEATDQYKELSKSEIGGIAAQYVEVLGGAENIQSLEACITRLRLTVKDDTIID CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCC DDKLKKLGATGVMRMGKNALQVIVGTKADLIAQEMKKHMKKAGGKI HHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3284790; 3056518; 8905232; 9278503 [H]