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The map label for this gene is yesN [H]

Identifier: 167039062

GI number: 167039062

Start: 409566

End: 410663

Strand: Direct

Name: yesN [H]

Synonym: Teth514_0399

Alternate gene names: 167039062

Gene position: 409566-410663 (Clockwise)

Preceding gene: 167039061

Following gene: 167039063

Centisome position: 16.67

GC content: 29.96

Gene sequence:

>1098_bases
ATGAAAATTTTAATTGTAGATGATGAACCGATTGTAAGAGAAGGGCTTAAAAATAATGTTAGTTGGCAGGAGTTAGATTT
ACGTGTGGTAGGTTGCGAAGCCAATGGAAAAAGTGCTCTTGATGTGTTTAACAGAGAACAACCTGATATAATTTTAACGG
ATATACGCATGCCCTTTATGGATGGACTCGAACTTACAAGGGAAGTCAAAAAGCTAGACCCTTTAGTTGTGGTAATTTTG
TTAAGTGCATATGATGATTTTAAATATGCTCAACAAGCTATAAGGTTAGGAGCCTTTGATTATATTTTAAAACCTATCGA
CATTGACACGCTAAAAGAAACTGTAAGACGAGCGGTTTTAAAAAGAAAAGAATTATTGGACAAAAAAAAGGAACCATTAC
CATCATTGAACAAAGAAGATTTGAAATTTTTTAAAGCAGAATATTATAAATATCCTTTAAAATTGGAAGAGAAATTATCA
AAAGCGATAAAACGGGGAGATAAAGATTTGGCTCTTAACATTTTTAACGATATTTGGAATGAATTTCACGACAAAAATTA
TACAGAAGATTTTATAAAAAGATGGGGGTTAGGGCTTGTTGCAGTTATTACGCGGTCGTTTATAGAAATTGGAGAAAATG
CAGATATTTTATTTAAAGAAACGGACCCTTGGAGACAAATTTCTGAATTATCTACTAAAGAAAAATTTCGAGAATGGATG
AGAAATATAATAGAAGTAGTATGTGAATATGTTTCTCTTACTAAAAACTCTAAAAATAGGAAATTAATTGATGAGGCTAT
CAAACTAATACAAGAAAATTATAGTGATTTAAATATTTCTTTAAATAGCATTGCTGAGAAATTATATATAACTCCAAACT
ATTTAAGTACTTTATTTAAAAGTGAAATGGGTGTCACATTTTCAGATTATTTAACTGCTTGCAGGATTGAAAAAGCGAAA
GAACTTTTAAAAGATGTAAAGGTTAAAATCTACGAAGTAGCCGAAGCAGTTGGATATACTGATCAACACTATTTTAGCAA
AGTTTTTAAAAACATAACAGGTTTTACTCCAAAAGAGTATAGAGAAAAAATATTGTAA

Upstream 100 bases:

>100_bases
AAGTTATATTATGGGGAAGAGTATGGACTTTATTACCAAGCAATAGATAGCAATACTGTTGCCCGAATTGTAATTCCTGC
TGTTTTGTGAGGTGGATTTT

Downstream 100 bases:

>100_bases
CAATTTTTTTGGCAGTTGTATTACGAAAATTATATATCATTGGTATAATAGGTAGTGGGGGAAAATATATACACAGAGAA
GGAGATGGTTTTATGCTGAT

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKILIVDDEPIVREGLKNNVSWQELDLRVVGCEANGKSALDVFNREQPDIILTDIRMPFMDGLELTREVKKLDPLVVVIL
LSAYDDFKYAQQAIRLGAFDYILKPIDIDTLKETVRRAVLKRKELLDKKKEPLPSLNKEDLKFFKAEYYKYPLKLEEKLS
KAIKRGDKDLALNIFNDIWNEFHDKNYTEDFIKRWGLGLVAVITRSFIEIGENADILFKETDPWRQISELSTKEKFREWM
RNIIEVVCEYVSLTKNSKNRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRIEKAK
ELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEYREKIL

Sequences:

>Translated_365_residues
MKILIVDDEPIVREGLKNNVSWQELDLRVVGCEANGKSALDVFNREQPDIILTDIRMPFMDGLELTREVKKLDPLVVVIL
LSAYDDFKYAQQAIRLGAFDYILKPIDIDTLKETVRRAVLKRKELLDKKKEPLPSLNKEDLKFFKAEYYKYPLKLEEKLS
KAIKRGDKDLALNIFNDIWNEFHDKNYTEDFIKRWGLGLVAVITRSFIEIGENADILFKETDPWRQISELSTKEKFREWM
RNIIEVVCEYVSLTKNSKNRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRIEKAK
ELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEYREKIL
>Mature_365_residues
MKILIVDDEPIVREGLKNNVSWQELDLRVVGCEANGKSALDVFNREQPDIILTDIRMPFMDGLELTREVKKLDPLVVVIL
LSAYDDFKYAQQAIRLGAFDYILKPIDIDTLKETVRRAVLKRKELLDKKKEPLPSLNKEDLKFFKAEYYKYPLKLEEKLS
KAIKRGDKDLALNIFNDIWNEFHDKNYTEDFIKRWGLGLVAVITRSFIEIGENADILFKETDPWRQISELSTKEKFREWM
RNIIEVVCEYVSLTKNSKNRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFKSEMGVTFSDYLTACRIEKAK
ELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEYREKIL

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788550, Length=130, Percent_Identity=41.5384615384615, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1790299, Length=124, Percent_Identity=36.2903225806452, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1790391, Length=107, Percent_Identity=38.3177570093458, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082052, Length=148, Percent_Identity=37.1621621621622, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI1786251, Length=110, Percent_Identity=36.3636363636364, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790437, Length=90, Percent_Identity=35.5555555555556, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788725, Length=111, Percent_Identity=34.2342342342342, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788905, Length=128, Percent_Identity=32.03125, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790559, Length=111, Percent_Identity=30.6306306306306, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI145693157, Length=115, Percent_Identity=31.304347826087, Blast_Score=63, Evalue=3e-11,
Organism=Escherichia coli, GI1787487, Length=116, Percent_Identity=35.3448275862069, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 42729; Mature: 42729

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILIVDDEPIVREGLKNNVSWQELDLRVVGCEANGKSALDVFNREQPDIILTDIRMPFM
CEEEEECCCHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCEEEEECCCCHH
DGLELTREVKKLDPLVVVILLSAYDDFKYAQQAIRLGAFDYILKPIDIDTLKETVRRAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KRKELLDKKKEPLPSLNKEDLKFFKAEYYKYPLKLEEKLSKAIKRGDKDLALNIFNDIWN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
EFHDKNYTEDFIKRWGLGLVAVITRSFIEIGENADILFKETDPWRQISELSTKEKFREWM
HHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
RNIIEVVCEYVSLTKNSKNRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHHHHHHH
SEMGVTFSDYLTACRIEKAKELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEY
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
REKIL
HHHCC
>Mature Secondary Structure
MKILIVDDEPIVREGLKNNVSWQELDLRVVGCEANGKSALDVFNREQPDIILTDIRMPFM
CEEEEECCCHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCEEEEECCCCHH
DGLELTREVKKLDPLVVVILLSAYDDFKYAQQAIRLGAFDYILKPIDIDTLKETVRRAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
KRKELLDKKKEPLPSLNKEDLKFFKAEYYKYPLKLEEKLSKAIKRGDKDLALNIFNDIWN
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
EFHDKNYTEDFIKRWGLGLVAVITRSFIEIGENADILFKETDPWRQISELSTKEKFREWM
HHCCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH
RNIIEVVCEYVSLTKNSKNRKLIDEAIKLIQENYSDLNISLNSIAEKLYITPNYLSTLFK
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHHHHHHH
SEMGVTFSDYLTACRIEKAKELLKDVKVKIYEVAEAVGYTDQHYFSKVFKNITGFTPKEY
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHH
REKIL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]