| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is celM [H]
Identifier: 167039041
GI number: 167039041
Start: 385850
End: 386833
Strand: Direct
Name: celM [H]
Synonym: Teth514_0378
Alternate gene names: 167039041
Gene position: 385850-386833 (Clockwise)
Preceding gene: 167039040
Following gene: 167039043
Centisome position: 15.7
GC content: 36.38
Gene sequence:
>984_bases ATGAGTTTAAATATAGAATTGATAAAAAAACTTACACAAACTTATGGACCCTCAGGAAATGAGGATAAAGTGCTTGAAAT TATAAAAGCGGAAGTAAAGGATTTTTGTGATGATATAACTTATGACGCTTTGGGAAATATGATATGCAAAAAAGCTGGAA AAGGAAAAAAGATAATGGTAGCTGCTCATACGGATGAAATAGGGCTTATGGTTACACACATAGAAGATGAGGGTTTCTTA AGGTTTACTACTATAGGGGGAGTTTTTGTAGAGCAGACAATAGGAAGAAGAGTAATTTTTAAAAATGGAGTGCAAGGAGT TATAGGAGTAGAGCATTTAGAGGATAAAAAAGAGATAAAGACTGAAAAGTTGTATATAGACATTGGAGCGAAAAATAAAG AAGAGGCTCAAAAATATGTAAATATAGGTGATAGTGCCGCATTTGCCGGTGAGTTTATTGAATCAGGAGATAGGCTTATC TCAAAAGCATTTGATGATAGAATAGGCTGTTATGTGGCAATTGAGGTATTGAAAAATCTTAAGACAAAAAATGAGGTATA TTTTGTTTTTACTGTTCAAGAAGAAGTTGGAACAAGAGGTGCAGCTGCAGCTGCCTATAACATACATCCAGATTTTGCTG TAGCAGTTGATGTTACATCAACTGGCGATACACCTAAAGCGAAAAAGATGGCAGTCTCTCTTGGTAAAGGGGCAGCTATA AAAGTGATGGACAGGTCAATAATAGTAAGCCCTTCTGTGAGGGAGATGATGATTGAAATAGCTCAAAAACACAACATCCC TTATCAGCTGGAAATACTTGAATTTGGTGGAACTGATGCAGGGCCTATACATTTGACAAAAGGCGGTATACCAGCTGGTG TCATATCAATTCCGACAAGGTACGTCCACAGCGTATCAGAAATGGTAGATAAAAATGACGTTGAGGCAAGCATTGAACTT TTGAAAAAAGTTCTTGAGAAATGA
Upstream 100 bases:
>100_bases ATATTCATTCTTTTAATTCTGTAGCCTTTTTAGAAGATTTTAATAACACAGTTAAATTGGTTGATTTGATAATCAAAAAT ATTGAAAAGGAGGCTTTAAT
Downstream 100 bases:
>100_bases TTGGTAAAAATATACAGACAAGGTGATGGTTCTTTTCTATAAGACAAGAGAACCCTCCTTTTGTTTGCTTGTAAAAGCTA GCAGGGAAGATAATAGAAAG
Product: peptidase M42 family protein
Products: D-glucose; GDP
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSLNIELIKKLTQTYGPSGNEDKVLEIIKAEVKDFCDDITYDALGNMICKKAGKGKKIMVAAHTDEIGLMVTHIEDEGFL RFTTIGGVFVEQTIGRRVIFKNGVQGVIGVEHLEDKKEIKTEKLYIDIGAKNKEEAQKYVNIGDSAAFAGEFIESGDRLI SKAFDDRIGCYVAIEVLKNLKTKNEVYFVFTVQEEVGTRGAAAAAYNIHPDFAVAVDVTSTGDTPKAKKMAVSLGKGAAI KVMDRSIIVSPSVREMMIEIAQKHNIPYQLEILEFGGTDAGPIHLTKGGIPAGVISIPTRYVHSVSEMVDKNDVEASIEL LKKVLEK
Sequences:
>Translated_327_residues MSLNIELIKKLTQTYGPSGNEDKVLEIIKAEVKDFCDDITYDALGNMICKKAGKGKKIMVAAHTDEIGLMVTHIEDEGFL RFTTIGGVFVEQTIGRRVIFKNGVQGVIGVEHLEDKKEIKTEKLYIDIGAKNKEEAQKYVNIGDSAAFAGEFIESGDRLI SKAFDDRIGCYVAIEVLKNLKTKNEVYFVFTVQEEVGTRGAAAAAYNIHPDFAVAVDVTSTGDTPKAKKMAVSLGKGAAI KVMDRSIIVSPSVREMMIEIAQKHNIPYQLEILEFGGTDAGPIHLTKGGIPAGVISIPTRYVHSVSEMVDKNDVEASIEL LKKVLEK >Mature_326_residues SLNIELIKKLTQTYGPSGNEDKVLEIIKAEVKDFCDDITYDALGNMICKKAGKGKKIMVAAHTDEIGLMVTHIEDEGFLR FTTIGGVFVEQTIGRRVIFKNGVQGVIGVEHLEDKKEIKTEKLYIDIGAKNKEEAQKYVNIGDSAAFAGEFIESGDRLIS KAFDDRIGCYVAIEVLKNLKTKNEVYFVFTVQEEVGTRGAAAAAYNIHPDFAVAVDVTSTGDTPKAKKMAVSLGKGAAIK VMDRSIIVSPSVREMMIEIAQKHNIPYQLEILEFGGTDAGPIHLTKGGIPAGVISIPTRYVHSVSEMVDKNDVEASIELL KKVLEK
Specific function: Unknown
COG id: COG1363
COG function: function code G; Cellulase M and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M42 family [H]
Homologues:
Organism=Escherichia coli, GI1790332, Length=338, Percent_Identity=34.0236686390533, Blast_Score=208, Evalue=5e-55, Organism=Escherichia coli, GI87082417, Length=350, Percent_Identity=31.4285714285714, Blast_Score=164, Evalue=7e-42, Organism=Escherichia coli, GI1788727, Length=338, Percent_Identity=27.810650887574, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008007 [H]
Pfam domain/function: PF05343 Peptidase_M42 [H]
EC number: 3.2.1.4
Molecular weight: Translated: 35769; Mature: 35638
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLNIELIKKLTQTYGPSGNEDKVLEIIKAEVKDFCDDITYDALGNMICKKAGKGKKIMV CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEE AAHTDEIGLMVTHIEDEGFLRFTTIGGVFVEQTIGRRVIFKNGVQGVIGVEHLEDKKEIK EEECCCEEEEEEEECCCCCEEEEEECCHHHHHHHCCEEEECCCCCCEEEHHHHHHHHHCC TEKLYIDIGAKNKEEAQKYVNIGDSAAFAGEFIESGDRLISKAFDDRIGCYVAIEVLKNL EEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC KTKNEVYFVFTVQEEVGTRGAAAAAYNIHPDFAVAVDVTSTGDTPKAKKMAVSLGKGAAI CCCCEEEEEEEEHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHEECCCCCEE KVMDRSIIVSPSVREMMIEIAQKHNIPYQLEILEFGGTDAGPIHLTKGGIPAGVISIPTR EEECCEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCCHHHCCHH YVHSVSEMVDKNDVEASIELLKKVLEK HHHHHHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SLNIELIKKLTQTYGPSGNEDKVLEIIKAEVKDFCDDITYDALGNMICKKAGKGKKIMV CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEE AAHTDEIGLMVTHIEDEGFLRFTTIGGVFVEQTIGRRVIFKNGVQGVIGVEHLEDKKEIK EEECCCEEEEEEEECCCCCEEEEEECCHHHHHHHCCEEEECCCCCCEEEHHHHHHHHHCC TEKLYIDIGAKNKEEAQKYVNIGDSAAFAGEFIESGDRLISKAFDDRIGCYVAIEVLKNL EEEEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC KTKNEVYFVFTVQEEVGTRGAAAAAYNIHPDFAVAVDVTSTGDTPKAKKMAVSLGKGAAI CCCCEEEEEEEEHHHHCCCCCEEEEEECCCCEEEEEEEECCCCCCCHHHHHEECCCCCEE KVMDRSIIVSPSVREMMIEIAQKHNIPYQLEILEFGGTDAGPIHLTKGGIPAGVISIPTR EEECCEEEECCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEECCCCCCCHHHCCHH YVHSVSEMVDKNDVEASIELLKKVLEK HHHHHHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDPglucose; H2O
Specific reaction: GDP-glucose + H2O = D-glucose + GDP
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA