| Definition | Thermoanaerobacter sp. X514 chromosome, complete genome. |
|---|---|
| Accession | NC_010320 |
| Length | 2,457,259 |
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The map label for this gene is zur [H]
Identifier: 167038947
GI number: 167038947
Start: 298850
End: 299266
Strand: Reverse
Name: zur [H]
Synonym: Teth514_0279
Alternate gene names: 167038947
Gene position: 299266-298850 (Counterclockwise)
Preceding gene: 167038952
Following gene: 167038946
Centisome position: 12.18
GC content: 31.41
Gene sequence:
>417_bases ATGCATAAACAAGAAGCCATTAAAAAATTAAAAGACCATAACTACAAACTTACGCCTCAACGAGAATTGATACTGGATAT CATGTTAAATCAGCAGGGGTATCTTTCTGTGAGACAAATCTATGAAAAAGTAAAAGAAGTCTTTCCTCAAGTAAGTATTG ACACAGTTTATCGCAATTTGAGCCTTTTGAAAGATATAAATATTTTAAATGAAACGACAATTGGCAATAATATCATGTAT GTAATGCGAAAAGAAATACACAATCATACCATGAGATGTTTAAAATGCGGCAAAATCTTTGAACTAGACATATGCCCTCT CGAACTTTGGATAAACCAAATAAAAGACTTTGAAATTGTAGACCACAAAATAGAAATCGTTGGTTATTGCAAAGATTGCA GGAGCAATAAAAACTAA
Upstream 100 bases:
>100_bases TTGATTTAAATTTATGTAAATTTCCCATTGACTTTTTTGCTAAATTGTAATACTATCTTAATTAAGAAAGATTTCTTATT TAATAAAGGGTGTGATTAAA
Downstream 100 bases:
>100_bases CTATAGGAGGTAATATTTATGAAAAAAACTTTAATCGCTATACTGCTTATCATGGCTTTAATTTTAGGTATAACCTCTTG TGGCACAAAAACAGTAGAAT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MHKQEAIKKLKDHNYKLTPQRELILDIMLNQQGYLSVRQIYEKVKEVFPQVSIDTVYRNLSLLKDINILNETTIGNNIMY VMRKEIHNHTMRCLKCGKIFELDICPLELWINQIKDFEIVDHKIEIVGYCKDCRSNKN
Sequences:
>Translated_138_residues MHKQEAIKKLKDHNYKLTPQRELILDIMLNQQGYLSVRQIYEKVKEVFPQVSIDTVYRNLSLLKDINILNETTIGNNIMY VMRKEIHNHTMRCLKCGKIFELDICPLELWINQIKDFEIVDHKIEIVGYCKDCRSNKN >Mature_138_residues MHKQEAIKKLKDHNYKLTPQRELILDIMLNQQGYLSVRQIYEKVKEVFPQVSIDTVYRNLSLLKDINILNETTIGNNIMY VMRKEIHNHTMRCLKCGKIFELDICPLELWINQIKDFEIVDHKIEIVGYCKDCRSNKN
Specific function: Required for the zinc-specific repression of two operons implicated in zinc uptake, yciC and ycdHIyceA. Also represses the expression of rpmE2, the gene for ribosomal protein L31B, which is expressed only after the end of exponential growth [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16452; Mature: 16452
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKQEAIKKLKDHNYKLTPQRELILDIMLNQQGYLSVRQIYEKVKEVFPQVSIDTVYRNL CCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH SLLKDINILNETTIGNNIMYVMRKEIHNHTMRCLKCGKIFELDICPLELWINQIKDFEIV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCHHH DHKIEIVGYCKDCRSNKN HHHHHHEEECHHHCCCCC >Mature Secondary Structure MHKQEAIKKLKDHNYKLTPQRELILDIMLNQQGYLSVRQIYEKVKEVFPQVSIDTVYRNL CCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHH SLLKDINILNETTIGNNIMYVMRKEIHNHTMRCLKCGKIFELDICPLELWINQIKDFEIV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCHHH DHKIEIVGYCKDCRSNKN HHHHHHEEECHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9811636 [H]