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The map label for this gene is rbsC [H]

Identifier: 167038835

GI number: 167038835

Start: 165517

End: 166473

Strand: Direct

Name: rbsC [H]

Synonym: Teth514_0165

Alternate gene names: 167038835

Gene position: 165517-166473 (Clockwise)

Preceding gene: 167038834

Following gene: 167038836

Centisome position: 6.74

GC content: 34.48

Gene sequence:

>957_bases
TTGAATTTACCGGAAGAAAAAGTAACAAAAATAAATATTAGTGAATTTTTACTCAAAGCAAAATCTTTGATAGGCTTAGT
AGGGTTAATCGTTGTATTTTCAATATTATCACCAAGATTTTTAGATTATTATAATCTTACAAATGTTTTAAGACAGACTT
CCCTAAATGCAATAATGGCTGTGGGTATGACGTTTGTAATATTAACAGGTGGAATAGACTTATCTGTAGGTTCTATATTA
GCCTTTTCAAGTGCAATTACAGCTGGCATGTTAAAAGACGGTTCTCCATTAATTATAGCGGTATTAGCAGGTTTAATAAT
AGGTACCGGTTTAGGATTTTTTAATGGTTTTGTCATAATTAGATGGAATATACCACCCTTTATTGCGACATTTGCCATGA
TGACAGTAGCAAGAGGTCTAACACTTGTATATACCAATGGACAACCAATAACGGGTTTAGGTGCGGCTTTTGGTTATATT
GGCAACGGTTATATTGGGCCGATACCTGTACCAATAATTCTTACGGTTCTTATCTTTGCGATAGGTTATTACATTTTAAA
GAATAATAGACTTGGAAGATATGTCTATGCTACAGGGGGCAATATACAGGCTGCTAAATTGGCTGGTATTAATACTAACA
ATATAATTCTATTTGTGTATTCTTTAAGTGGCTTTTTAGCAGCAATAAGTGGTTTAATAATTACTTCAAGGTTAAATTCC
GCAGCTCCAACAGCGGGACAGGGTGCTGAACTTGATGCCATAGCTGCGGTTGTACTTGGAGGTACAAGTTTATCAGGTGG
CGAAGGGGGAGTAATAGGTACTCTGATAGGTGCTTTGATAATAGGCATTTTAAATAATGGCTTAAATTTACTTAACGTTT
CGCCTTTTTATCAGCTTATAGCTAAAGGTGCAGTAATATTACTTGCTATAGCATTAGACAAAAAAGAAAGTAGATAA

Upstream 100 bases:

>100_bases
AGAATTATTGTAATGCATGAAGGAAGGATAACAGGCGAAATACTTCATGAAGAAGCGACAGAAGAAAAGGTAATGTTAAA
AGCTGTAGGAGGGGAATGAG

Downstream 100 bases:

>100_bases
AGGGGGTGTTTTAGGAAGGTTTTAATTGAAAAACAAAAAGTTTTAAAAATTAAAAATTTAATTAAAAGGGGAGAGTTGAA
TTATGAGAAAATCAAAAATT

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MNLPEEKVTKINISEFLLKAKSLIGLVGLIVVFSILSPRFLDYYNLTNVLRQTSLNAIMAVGMTFVILTGGIDLSVGSIL
AFSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVIIRWNIPPFIATFAMMTVARGLTLVYTNGQPITGLGAAFGYI
GNGYIGPIPVPIILTVLIFAIGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS
AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLIAKGAVILLAIALDKKESR

Sequences:

>Translated_318_residues
MNLPEEKVTKINISEFLLKAKSLIGLVGLIVVFSILSPRFLDYYNLTNVLRQTSLNAIMAVGMTFVILTGGIDLSVGSIL
AFSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVIIRWNIPPFIATFAMMTVARGLTLVYTNGQPITGLGAAFGYI
GNGYIGPIPVPIILTVLIFAIGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS
AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLIAKGAVILLAIALDKKESR
>Mature_318_residues
MNLPEEKVTKINISEFLLKAKSLIGLVGLIVVFSILSPRFLDYYNLTNVLRQTSLNAIMAVGMTFVILTGGIDLSVGSIL
AFSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVIIRWNIPPFIATFAMMTVARGLTLVYTNGQPITGLGAAFGYI
GNGYIGPIPVPIILTVLIFAIGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS
AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLIAKGAVILLAIALDKKESR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=306, Percent_Identity=52.6143790849673, Blast_Score=276, Evalue=1e-75,
Organism=Escherichia coli, GI1788896, Length=326, Percent_Identity=36.1963190184049, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1790524, Length=318, Percent_Identity=38.6792452830189, Blast_Score=183, Evalue=1e-47,
Organism=Escherichia coli, GI145693152, Length=298, Percent_Identity=35.9060402684564, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI87082395, Length=287, Percent_Identity=38.3275261324042, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI145693214, Length=249, Percent_Identity=40.1606425702811, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1789992, Length=137, Percent_Identity=47.4452554744526, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1787793, Length=280, Percent_Identity=33.2142857142857, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1788471, Length=309, Percent_Identity=34.9514563106796, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1787794, Length=270, Percent_Identity=29.6296296296296, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 33096; Mature: 33096

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLPEEKVTKINISEFLLKAKSLIGLVGLIVVFSILSPRFLDYYNLTNVLRQTSLNAIMA
CCCCHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VGMTFVILTGGIDLSVGSILAFSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVII
HHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHCCEEEE
RWNIPPFIATFAMMTVARGLTLVYTNGQPITGLGAAFGYIGNGYIGPIPVPIILTVLIFA
EECCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
IGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS
HHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCC
AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLI
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHH
AKGAVILLAIALDKKESR
HCCHHEEEEEEECCCCCC
>Mature Secondary Structure
MNLPEEKVTKINISEFLLKAKSLIGLVGLIVVFSILSPRFLDYYNLTNVLRQTSLNAIMA
CCCCHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VGMTFVILTGGIDLSVGSILAFSSAITAGMLKDGSPLIIAVLAGLIIGTGLGFFNGFVII
HHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHCCEEEE
RWNIPPFIATFAMMTVARGLTLVYTNGQPITGLGAAFGYIGNGYIGPIPVPIILTVLIFA
EECCCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
IGYYILKNNRLGRYVYATGGNIQAAKLAGINTNNIILFVYSLSGFLAAISGLIITSRLNS
HHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCC
AAPTAGQGAELDAIAAVVLGGTSLSGGEGGVIGTLIGALIIGILNNGLNLLNVSPFYQLI
CCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHH
AKGAVILLAIALDKKESR
HCCHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]