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The map label for this gene is ccpA [H]

Identifier: 167038831

GI number: 167038831

Start: 161657

End: 162667

Strand: Direct

Name: ccpA [H]

Synonym: Teth514_0161

Alternate gene names: 167038831

Gene position: 161657-162667 (Clockwise)

Preceding gene: 167038830

Following gene: 167038832

Centisome position: 6.58

GC content: 33.53

Gene sequence:

>1011_bases
ATGGCTGTAACAATAAAAGATATTGCAAAACTAGCGAATGTATCAATTACAACAGTATCGAGAGTTATAAACAATAAAAG
TGAAGGGGTTAGTGAAGAAACTAGAAATAGGATTCTTCAATTAGTAAAAGAATTAGGGTATCAACCTAATGCAATAGCAC
GAGGCTTAGTTACTAAAAAAACTAAAACTATCGGCCTTATAATTCCTGATATTTCCAACCCATTCTTTCCTGATATTGCC
CGTGGTGTAGAGGATAGTGCTCACATTTACGGTTACAACGTCTTCTTGTGCAATACAGATGACAATTTGGAGAAAGAAAG
CGAGTATATAAATGCACTAAAAGAAAAATATGTCGATGGTATAATATTTACCAGCAGTTCTATTCCTAAACATGAACACA
TTATGGAACTTGTCAAGAGTGGTATTCCTATTGTCATAATGGATAGACGTGTTGATTCTGAAGACATTTACGGAGTTTTT
CTTGATAACTATGAAGGTGGTTACATTGCGACAAAACATCTCATAGATTTAGGGCATAAAAAAATTGCGTGTATAACGGG
ACCGCTTTATACAAAAAGTGCCAAAGAAAGACTAGAAGGGTACAAAAAAGCATTAGTAGAAAATGGTATGGATGTGGATG
AAAGGTTGATATTTGAAGGAGATTATAAGATAAACAGTGGAATAATTGGAACTGAAAAATTGTTAGGTAATAATGAAAAT
GTTACAGCTATTTTTGCCTGCAATGATTTAATGGCGTATGGAGCGTACAAAACAATACGTTCATATGGGTACAAGATACC
AGATGATATTTCAATAGTAGGGTTTGATGATATACAGCTTTCTCAAATACTAGAACCACAATTAACTACTATAAAGCAAC
CTGCATATGATATGGGACTGGCTGCTGCTCGAATGCTAATAAAACTTGTAGAAGGGAAAAAGTTAAAGAAAAAAATTATT
AATTTTAGACCACAGTTGATAATACGCCAAAGCACAAAAAATATTGGCTAA

Upstream 100 bases:

>100_bases
AAATTTTTATTTTTATTATTGACAAAATGTCATTTTTATTTTATTATATAGTTAAGCGTTTTACTAAAACGTTAAACCAA
ATTTAATAGGTGATGAATTT

Downstream 100 bases:

>100_bases
AGGTGGTAAAAAAAGATGGAGAAGATAGTTGTTGTTGGAAGTATTAATATGGACGTTGTGATACGAGTTCCGCATATTCC
TGTAGTTGGTGAGACAGTTA

Product: periplasmic binding protein/LacI transcriptional regulator

Products: NA

Alternate protein names: Catabolite control protein [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MAVTIKDIAKLANVSITTVSRVINNKSEGVSEETRNRILQLVKELGYQPNAIARGLVTKKTKTIGLIIPDISNPFFPDIA
RGVEDSAHIYGYNVFLCNTDDNLEKESEYINALKEKYVDGIIFTSSSIPKHEHIMELVKSGIPIVIMDRRVDSEDIYGVF
LDNYEGGYIATKHLIDLGHKKIACITGPLYTKSAKERLEGYKKALVENGMDVDERLIFEGDYKINSGIIGTEKLLGNNEN
VTAIFACNDLMAYGAYKTIRSYGYKIPDDISIVGFDDIQLSQILEPQLTTIKQPAYDMGLAAARMLIKLVEGKKLKKKII
NFRPQLIIRQSTKNIG

Sequences:

>Translated_336_residues
MAVTIKDIAKLANVSITTVSRVINNKSEGVSEETRNRILQLVKELGYQPNAIARGLVTKKTKTIGLIIPDISNPFFPDIA
RGVEDSAHIYGYNVFLCNTDDNLEKESEYINALKEKYVDGIIFTSSSIPKHEHIMELVKSGIPIVIMDRRVDSEDIYGVF
LDNYEGGYIATKHLIDLGHKKIACITGPLYTKSAKERLEGYKKALVENGMDVDERLIFEGDYKINSGIIGTEKLLGNNEN
VTAIFACNDLMAYGAYKTIRSYGYKIPDDISIVGFDDIQLSQILEPQLTTIKQPAYDMGLAAARMLIKLVEGKKLKKKII
NFRPQLIIRQSTKNIG
>Mature_335_residues
AVTIKDIAKLANVSITTVSRVINNKSEGVSEETRNRILQLVKELGYQPNAIARGLVTKKTKTIGLIIPDISNPFFPDIAR
GVEDSAHIYGYNVFLCNTDDNLEKESEYINALKEKYVDGIIFTSSSIPKHEHIMELVKSGIPIVIMDRRVDSEDIYGVFL
DNYEGGYIATKHLIDLGHKKIACITGPLYTKSAKERLEGYKKALVENGMDVDERLIFEGDYKINSGIIGTEKLLGNNENV
TAIFACNDLMAYGAYKTIRSYGYKIPDDISIVGFDDIQLSQILEPQLTTIKQPAYDMGLAAARMLIKLVEGKKLKKKIIN
FRPQLIIRQSTKNIG

Specific function: Transcriptional regulator involved in both the repression of carbohydrate utilization genes such as the alpha- amylase (amyE) and the acetyl-coenzyme A synthetase (acsA); and in the positive regulation of genes involved in excretion of excess carbon such

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787948, Length=333, Percent_Identity=37.8378378378378, Blast_Score=231, Evalue=4e-62,
Organism=Escherichia coli, GI1790194, Length=331, Percent_Identity=37.4622356495468, Blast_Score=224, Evalue=9e-60,
Organism=Escherichia coli, GI1790369, Length=335, Percent_Identity=35.5223880597015, Blast_Score=218, Evalue=3e-58,
Organism=Escherichia coli, GI1789202, Length=329, Percent_Identity=34.6504559270517, Blast_Score=195, Evalue=4e-51,
Organism=Escherichia coli, GI1788474, Length=330, Percent_Identity=33.6363636363636, Blast_Score=177, Evalue=7e-46,
Organism=Escherichia coli, GI1789068, Length=301, Percent_Identity=33.2225913621262, Blast_Score=175, Evalue=5e-45,
Organism=Escherichia coli, GI1787580, Length=333, Percent_Identity=31.2312312312312, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1786540, Length=316, Percent_Identity=31.6455696202532, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI48994940, Length=320, Percent_Identity=29.0625, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1787906, Length=328, Percent_Identity=26.219512195122, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1786268, Length=298, Percent_Identity=27.8523489932886, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790715, Length=313, Percent_Identity=27.4760383386581, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790689, Length=322, Percent_Identity=24.8447204968944, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1790192, Length=218, Percent_Identity=26.1467889908257, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789456, Length=358, Percent_Identity=25.9776536312849, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1790526, Length=259, Percent_Identity=24.3243243243243, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006377
- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37543; Mature: 37412

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTIKDIAKLANVSITTVSRVINNKSEGVSEETRNRILQLVKELGYQPNAIARGLVTKK
CEEEHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
TKTIGLIIPDISNPFFPDIARGVEDSAHIYGYNVFLCNTDDNLEKESEYINALKEKYVDG
CCEEEEEECCCCCCCCHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCE
IIFTSSSIPKHEHIMELVKSGIPIVIMDRRVDSEDIYGVFLDNYEGGYIATKHLIDLGHK
EEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCEEHHHHHHHCCCC
KIACITGPLYTKSAKERLEGYKKALVENGMDVDERLIFEGDYKINSGIIGTEKLLGNNEN
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCHHHHCCCCCC
VTAIFACNDLMAYGAYKTIRSYGYKIPDDISIVGFDDIQLSQILEPQLTTIKQPAYDMGL
EEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHCCHHHHHHCCCHHHHHH
AAARMLIKLVEGKKLKKKIINFRPQLIIRQSTKNIG
HHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCC
>Mature Secondary Structure 
AVTIKDIAKLANVSITTVSRVINNKSEGVSEETRNRILQLVKELGYQPNAIARGLVTKK
EEEHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
TKTIGLIIPDISNPFFPDIARGVEDSAHIYGYNVFLCNTDDNLEKESEYINALKEKYVDG
CCEEEEEECCCCCCCCHHHHHCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCE
IIFTSSSIPKHEHIMELVKSGIPIVIMDRRVDSEDIYGVFLDNYEGGYIATKHLIDLGHK
EEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECCCCCEEHHHHHHHCCCC
KIACITGPLYTKSAKERLEGYKKALVENGMDVDERLIFEGDYKINSGIIGTEKLLGNNEN
EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEECCCCCCHHHHCCCCCC
VTAIFACNDLMAYGAYKTIRSYGYKIPDDISIVGFDDIQLSQILEPQLTTIKQPAYDMGL
EEEEEEECHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHCCHHHHHHCCCHHHHHH
AAARMLIKLVEGKKLKKKIINFRPQLIIRQSTKNIG
HHHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8200532 [H]