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The map label for this gene is yabE [H]

Identifier: 167038741

GI number: 167038741

Start: 70709

End: 71740

Strand: Direct

Name: yabE [H]

Synonym: Teth514_0068

Alternate gene names: 167038741

Gene position: 70709-71740 (Clockwise)

Preceding gene: 167038740

Following gene: 167038742

Centisome position: 2.88

GC content: 34.11

Gene sequence:

>1032_bases
ATGGATACAGACGATTTTAGAAAGCGACTTGGTGAAATATTTAAAAAACCAGTTGCTCTTCTAACATTGGCTGCCGTATT
CCTATTGATTGTCGGAGTTGGAACATACGCAAGCTTAAAAAAGGAAATAACCCTTCAGGATGAAGATAAAAAAATAGTTG
TTACAACATTTAAATCAACAGTTAAAGATTTGTTAGAAGAGAAAGGAATTAAACTAAAAAAAGAAGATGTAGTAACGCCT
TCTTTAGACACTTCTTTAAAAAATGGCATGAAGGTGACTATCAAAAGAGCAGTTCCTATCACTATCTGTGTGGGTGGAAA
AGCAAAAGATATTTACACTGCTGCATCTAATGTAAAAGAAGTACTTCAACAAAATAGTATAACTTTAGGACCACAAGACA
AAGTAAATATGAGTTTAGATACGCCTGTTTTTAAGTACATGTACATCGATGTTACAAAAGTAACAGAAAAAATTGTTACT
CAAGAAGTAGATATACCATATCAAACAGAGACAGTAAAGAATGACAATATGGAAAGAGGGCAAGTAAGAGTAGTTCAACA
AGGAGAAGTTGGGAAAAAACAAATTGTGATGAAAGTTACTTATGAAAACGGCAAAGAGGTAGCAAAAAATATAATAGAAG
AAAAGATAATAAAAAATCCAATTAACCAAATTGTGCATGTGGGAACATTAGGAATTTTTACTACTTCAAGAGGGGAGACT
TTTAGGTATAGAGAAGTTAGAACTATGGTAGCTACAGCTTATGACAGTAGTGAAGGAAGCACTGGTAAAAAACCTGGTGA
TCCAGATTATGGAATAACAGCTACTGGTATAAAAGCTACAAGGGGAGTAATAGCTGTAGACCCCAGAGTTATACCTTTGG
GAACGAAGTTGTACGTAGAAGGGTATGGCTTTGGAATTGCTGCAGATACAGGTGGAGCTATAAAAGGTAATAAAATTGAT
GTCTATTTTCCAACCCGTGAAGAAGTAATGAGATGGGGAAGAAGATACGTTAAAGTTTATATTTTAAAGTAG

Upstream 100 bases:

>100_bases
ATAAATGAAAAATTGTGTATAAAAGTTTGACAAATCAAATTAATTGGATTAAAATTACTTACGACTCCCCTAAATTAAAT
TTTTAACAGGAGGTTATGGG

Downstream 100 bases:

>100_bases
ACAGGGTTTCCCTGTCTTATTTTTTGAGGTGGAGCTATGAAAGTAAAAGGGGTTAATGTAAAGAAAAAATGGGGACAAAA
TTTCATATTTGACAAAAATA

Product: 3D domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MDTDDFRKRLGEIFKKPVALLTLAAVFLLIVGVGTYASLKKEITLQDEDKKIVVTTFKSTVKDLLEEKGIKLKKEDVVTP
SLDTSLKNGMKVTIKRAVPITICVGGKAKDIYTAASNVKEVLQQNSITLGPQDKVNMSLDTPVFKYMYIDVTKVTEKIVT
QEVDIPYQTETVKNDNMERGQVRVVQQGEVGKKQIVMKVTYENGKEVAKNIIEEKIIKNPINQIVHVGTLGIFTTSRGET
FRYREVRTMVATAYDSSEGSTGKKPGDPDYGITATGIKATRGVIAVDPRVIPLGTKLYVEGYGFGIAADTGGAIKGNKID
VYFPTREEVMRWGRRYVKVYILK

Sequences:

>Translated_343_residues
MDTDDFRKRLGEIFKKPVALLTLAAVFLLIVGVGTYASLKKEITLQDEDKKIVVTTFKSTVKDLLEEKGIKLKKEDVVTP
SLDTSLKNGMKVTIKRAVPITICVGGKAKDIYTAASNVKEVLQQNSITLGPQDKVNMSLDTPVFKYMYIDVTKVTEKIVT
QEVDIPYQTETVKNDNMERGQVRVVQQGEVGKKQIVMKVTYENGKEVAKNIIEEKIIKNPINQIVHVGTLGIFTTSRGET
FRYREVRTMVATAYDSSEGSTGKKPGDPDYGITATGIKATRGVIAVDPRVIPLGTKLYVEGYGFGIAADTGGAIKGNKID
VYFPTREEVMRWGRRYVKVYILK
>Mature_343_residues
MDTDDFRKRLGEIFKKPVALLTLAAVFLLIVGVGTYASLKKEITLQDEDKKIVVTTFKSTVKDLLEEKGIKLKKEDVVTP
SLDTSLKNGMKVTIKRAVPITICVGGKAKDIYTAASNVKEVLQQNSITLGPQDKVNMSLDTPVFKYMYIDVTKVTEKIVT
QEVDIPYQTETVKNDNMERGQVRVVQQGEVGKKQIVMKVTYENGKEVAKNIIEEKIIKNPINQIVHVGTLGIFTTSRGET
FRYREVRTMVATAYDSSEGSTGKKPGDPDYGITATGIKATRGVIAVDPRVIPLGTKLYVEGYGFGIAADTGGAIKGNKID
VYFPTREEVMRWGRRYVKVYILK

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 38085; Mature: 38085

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS51109 G5 ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDDFRKRLGEIFKKPVALLTLAAVFLLIVGVGTYASLKKEITLQDEDKKIVVTTFKST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEECCCCEEEEEEHHHH
VKDLLEEKGIKLKKEDVVTPSLDTSLKNGMKVTIKRAVPITICVGGKAKDIYTAASNVKE
HHHHHHHCCCEEECCCCCCCCCCHHHCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHH
VLQQNSITLGPQDKVNMSLDTPVFKYMYIDVTKVTEKIVTQEVDIPYQTETVKNDNMERG
HHHHCCEEECCCCCCCEEECCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QVRVVQQGEVGKKQIVMKVTYENGKEVAKNIIEEKIIKNPINQIVHVGTLGIFTTSRGET
EEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCE
FRYREVRTMVATAYDSSEGSTGKKPGDPDYGITATGIKATRGVIAVDPRVIPLGTKLYVE
EHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEECCCHHHCCEEEECCEEEECCCEEEEE
GYGFGIAADTGGAIKGNKIDVYFPTREEVMRWGRRYVKVYILK
EECEEEEECCCCCEECCEEEEEECCHHHHHHHCCEEEEEEEEC
>Mature Secondary Structure
MDTDDFRKRLGEIFKKPVALLTLAAVFLLIVGVGTYASLKKEITLQDEDKKIVVTTFKST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEECCCCEEEEEEHHHH
VKDLLEEKGIKLKKEDVVTPSLDTSLKNGMKVTIKRAVPITICVGGKAKDIYTAASNVKE
HHHHHHHCCCEEECCCCCCCCCCHHHCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHH
VLQQNSITLGPQDKVNMSLDTPVFKYMYIDVTKVTEKIVTQEVDIPYQTETVKNDNMERG
HHHHCCEEECCCCCCCEEECCCEEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
QVRVVQQGEVGKKQIVMKVTYENGKEVAKNIIEEKIIKNPINQIVHVGTLGIFTTSRGET
EEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCE
FRYREVRTMVATAYDSSEGSTGKKPGDPDYGITATGIKATRGVIAVDPRVIPLGTKLYVE
EHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEECCCHHHCCEEEECCEEEECCCEEEEE
GYGFGIAADTGGAIKGNKIDVYFPTREEVMRWGRRYVKVYILK
EECEEEEECCCCCEECCEEEEEECCHHHHHHHCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]