| Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
|---|---|
| Accession | NC_000914 |
| Length | 536,165 |
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The map label for this gene is nolL
Identifier: 16519720
GI number: 16519720
Start: 495904
End: 497004
Strand: Direct
Name: nolL
Synonym: NGR_a03860
Alternate gene names: 16519720
Gene position: 495904-497004 (Clockwise)
Preceding gene: 16519721
Following gene: 16519719
Centisome position: 92.49
GC content: 48.59
Gene sequence:
>1101_bases ATGGGGTACGCCGCAGTCCCCCCTGTGGAGCGCGGTTCGTGCTCCGCAGGGGCGAACAATCGCGATATAACCTTTGATTT TGTCAAAGGCATTCTCATAATTTTGGTAGTATTGGGTCATCTATTACAATTGGTGATCTATCGAAACACAGATAACTTTT GGTTGTCGCCGTATTTTAAGGCGATCTATATGTTTCACATGCCCCTCTTTATGGCCATAAGTGGATATCTTGCTTCTGGA ACAATTCTGCGAACATCGTTTTGTCGCGCCGTCGGTGATCGTGCGGTTCAATTACTGATTCCAATGCTGTTTTGGTGCGC ACTTATTGAAACAGCCAAGCTAGCCGCGTTTTTTCACTTCAGCGGCGTGACTGCCGGACTTCTGGACTTTTCACGTGAAT TGGTTGGCACATATTGGTTCTTGTGGGCAGTACTTGCTTCTTTCCTTCTCACAAAGCTCTTTGCGGCTTTCAACCTTTTA TCGAAATGGATCCTGTGCGCGTCTGCAATTGTGATCGCACTTATGCCTATCACATTATCGATAGTACCATTGCTGAGATA TACCTATCCGTTCTTCTGTTTGGGGTTCTTGTTTGCCCAGACGATCGAGGAGCAGGCGAACACCATGCTACGTCACAAAT CTCTTTTGATGTTCTCATGCTGGGCAGTGGCTTGCCTGTGCTTTCTTGATTGGGGGAGGGACACTTACGCTTACAACAAT CTTGTTTTAGTTCATGATGCACAATCGGCTAAACAGGTCTTGCTGATGTTCACCGGGTCTGCAGCCGCTGCAGCAGTGGC GGCGCAATCTTTGTTTCACTGTTGGAGGGTTCTATGCTCGACTCGATTAGCTCGCCTTGTTGCGGTGGAGCTTGGTCAAA GTACTTTGCTGCTTTACTTAGTTCAGGGCGCCGTCTTTCGCTTAACGGACTTGATACAATTCGGAGAACTTTGGGACGGC AAGACCAGAATTGTCGTTGCAAGTGCGATTGGAGCGGCGATTTTTGGCGCCGCGACGGCAGTTCTCTGGATTGTGAACGA CCTTGGATACGTGTCACGGATAATCGTCGGAGCGCCGCGACGTCTCAAGAGATCATCATGA
Upstream 100 bases:
>100_bases ACGGACGTTGAGCAGCAACTGATTTTCTCCTGTCCCAAGTCTCCCGATCGTCTATTCGAGAATGCATAACCGTCGCTGGA TGAAAATTTAGGAGCTGGTC
Downstream 100 bases:
>100_bases TGCAGGCGATCTTTGACGCGCCGTATGCGCGGACCTGGGCGGGTGAGCGGGACGCGCGCTGTTCAGCATGATGTATAACA CCGGCGCCCGCGTGTCTGAA
Product: nodulation protein NolL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MGYAAVPPVERGSCSAGANNRDITFDFVKGILIILVVLGHLLQLVIYRNTDNFWLSPYFKAIYMFHMPLFMAISGYLASG TILRTSFCRAVGDRAVQLLIPMLFWCALIETAKLAAFFHFSGVTAGLLDFSRELVGTYWFLWAVLASFLLTKLFAAFNLL SKWILCASAIVIALMPITLSIVPLLRYTYPFFCLGFLFAQTIEEQANTMLRHKSLLMFSCWAVACLCFLDWGRDTYAYNN LVLVHDAQSAKQVLLMFTGSAAAAAVAAQSLFHCWRVLCSTRLARLVAVELGQSTLLLYLVQGAVFRLTDLIQFGELWDG KTRIVVASAIGAAIFGAATAVLWIVNDLGYVSRIIVGAPRRLKRSS
Sequences:
>Translated_366_residues MGYAAVPPVERGSCSAGANNRDITFDFVKGILIILVVLGHLLQLVIYRNTDNFWLSPYFKAIYMFHMPLFMAISGYLASG TILRTSFCRAVGDRAVQLLIPMLFWCALIETAKLAAFFHFSGVTAGLLDFSRELVGTYWFLWAVLASFLLTKLFAAFNLL SKWILCASAIVIALMPITLSIVPLLRYTYPFFCLGFLFAQTIEEQANTMLRHKSLLMFSCWAVACLCFLDWGRDTYAYNN LVLVHDAQSAKQVLLMFTGSAAAAAVAAQSLFHCWRVLCSTRLARLVAVELGQSTLLLYLVQGAVFRLTDLIQFGELWDG KTRIVVASAIGAAIFGAATAVLWIVNDLGYVSRIIVGAPRRLKRSS >Mature_365_residues GYAAVPPVERGSCSAGANNRDITFDFVKGILIILVVLGHLLQLVIYRNTDNFWLSPYFKAIYMFHMPLFMAISGYLASGT ILRTSFCRAVGDRAVQLLIPMLFWCALIETAKLAAFFHFSGVTAGLLDFSRELVGTYWFLWAVLASFLLTKLFAAFNLLS KWILCASAIVIALMPITLSIVPLLRYTYPFFCLGFLFAQTIEEQANTMLRHKSLLMFSCWAVACLCFLDWGRDTYAYNNL VLVHDAQSAKQVLLMFTGSAAAAAVAAQSLFHCWRVLCSTRLARLVAVELGQSTLLLYLVQGAVFRLTDLIQFGELWDGK TRIVVASAIGAAIFGAATAVLWIVNDLGYVSRIIVGAPRRLKRSS
Specific function: Thought to be an acetyltransferase that modifies the fucose of the nod factor
COG id: COG3594
COG function: function code G; Fucose 4-O-acetylase and related acetyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NOLL_RHISN (P55431)
Other databases:
- EMBL: U00090 - RefSeq: NP_443840.1 - GeneID: 962618 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a03860 - HOGENOM: HBG655975 - GO: GO:0009877 - InterPro: IPR002656
Pfam domain/function: PF01757 Acyl_transf_3
EC number: NA
Molecular weight: Translated: 40584; Mature: 40452
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc4c8b2c)-; HASH(0xb7f8bb0)-; HASH(0xc6aefcc)-; HASH(0xcbb4840)-; HASH(0x970f07c)-; HASH(0xcb9db88)-; HASH(0xcbbd464)-; HASH(0xcbb12fc)-; HASH(0xcb9d954)-;
Cys/Met content:
2.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYAAVPPVERGSCSAGANNRDITFDFVKGILIILVVLGHLLQLVIYRNTDNFWLSPYFK CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH AIYMFHMPLFMAISGYLASGTILRTSFCRAVGDRAVQLLIPMLFWCALIETAKLAAFFHF HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGVTAGLLDFSRELVGTYWFLWAVLASFLLTKLFAAFNLLSKWILCASAIVIALMPITLS HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVPLLRYTYPFFCLGFLFAQTIEEQANTMLRHKSLLMFSCWAVACLCFLDWGRDTYAYNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC LVLVHDAQSAKQVLLMFTGSAAAAAVAAQSLFHCWRVLCSTRLARLVAVELGQSTLLLYL EEEEECCHHHHHEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VQGAVFRLTDLIQFGELWDGKTRIVVASAIGAAIFGAATAVLWIVNDLGYVSRIIVGAPR HHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RLKRSS HHCCCH >Mature Secondary Structure GYAAVPPVERGSCSAGANNRDITFDFVKGILIILVVLGHLLQLVIYRNTDNFWLSPYFK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH AIYMFHMPLFMAISGYLASGTILRTSFCRAVGDRAVQLLIPMLFWCALIETAKLAAFFHF HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGVTAGLLDFSRELVGTYWFLWAVLASFLLTKLFAAFNLLSKWILCASAIVIALMPITLS HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVPLLRYTYPFFCLGFLFAQTIEEQANTMLRHKSLLMFSCWAVACLCFLDWGRDTYAYNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC LVLVHDAQSAKQVLLMFTGSAAAAAVAAQSLFHCWRVLCSTRLARLVAVELGQSTLLLYL EEEEECCHHHHHEEHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH VQGAVFRLTDLIQFGELWDGKTRIVVASAIGAAIFGAATAVLWIVNDLGYVSRIIVGAPR HHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RLKRSS HHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9163424