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The map label for this gene is yibP [C]

Identifier: 163845416

GI number: 163845416

Start: 1277759

End: 1279108

Strand: Reverse

Name: yibP [C]

Synonym: BSUIS_B1316

Alternate gene names: 163845416

Gene position: 1279108-1277759 (Counterclockwise)

Preceding gene: 163845417

Following gene: 163845415

Centisome position: 91.31

GC content: 59.48

Gene sequence:

>1350_bases
ATGAATTCAATAGGTCTTTTCAGAACGCTTGGTGGGTTTGCACCACTGCGGGCAGGCCGCCTTCTGGCCGGGTTTGCCCT
TGCTGGCGCGCTTGCCTGCGCGCCGCCGGCCGTCGCGCAGGATGCGCTCAAGCAGCAGCGTGACCAGATGGCAAGCGAAT
ATGAAAAGCTCAGCAACGAACTGACCGTCACCGGCGACACGCTGAAACAGCTCGAAGACGAGGTGGCGAGCCTCAAGAAA
GATCAGTCAACCATTACTGCCGTGCTGATCCAGTCGGCCAAGACCGACAAGAAGCTCCAGCAGGATATAGCCGATATTGC
TGACAGGCTGGTTGCGCTGCGCGAACAGGAAGACGGCATCCGCGCTTCGCTTCGTGCAAGGCGCGGCGTTCTGGCCGAGG
TGCTGGCCGCATTGCAGCGCATGGGCCTCAATCCGCCGCCTGCCATTCTTGTTCGGCCCGACGATGCACTTGCCTCGGTG
CGCAGCGCCGTGCTTCTGGGGGCGGTGGTACCCGATATGCGCGATCAGGTGAAAGAACTGACCGGCGATCTGAAGGATAT
GCAGCATGTCAGCGCCTCTATCGCGCAGGAGCAGGAAAAGCTGAAAGAAACGCGCACCGCGCAGGCTGAGGAGCGGGAGC
GTCAATCACTTCTTCTTGAGGAGAAGAAGAGATTGCAGCGCCAATCCGAGCAGGAGATCGAGGCGCAACGCAAGCATTCC
GAGGAACTGGCGGCAAAGGCTGGAAGCCTCAAGGAGCTGATCGCCTCGCTGGATAAGCAGATGGCAAGCGTTCGCGAGGC
GGCGGAAGCGGCCCGCAAGGCGGAAGCCGAGCGCCTTGCAGCGGCGAAGGAAAAAGCCGGGGAATCCACGCCTGGCGACC
GCCATTTGCGCGCGCAGAGCGACTTTTCCACCCTGCAAGGCAGGCTGGTCCTGCCAGCTGCGGGCAAAATCATGCGCCGT
TTCGGCGACAAGGATGGTGTCGGCGGCTCCATGATGGGGCAGGTCGTCGAAACCTTGCCTTCCGCCACGATTACGTCACC
TTCGGATGGCGTTGTTCTTTACGCAGGCGTATTCAGATCCTACGGCCAACTCTTGATCCTTGATGCCGGCAACGGATATC
ATATCGTGATGGCTGGCATGGGGCGAATCGATGTTGCCCAGGGTCAGTTTGTGCTGGCGGGAGAGCCGGTCGGCGCAATG
GGTGAAAAACTTCTGGCAAGTGTTGCATCTGTTGAGGTGGGCAATGGTGCGCCATTGCTTTACATTGAATTTCGAAAGGA
TGGAAAACCCGTCGATCCCGCCCCGTGGTGGACTGAACGGCTTTCTGGAAGGACACAAAATGATACGTAA

Upstream 100 bases:

>100_bases
TTGCGGTCTGTGGTTTATGGTTGATGGTTCGTTAACGGTATCCGGCTAGATTTGTAGTCCGGCTTTAAAAGCAGCTTTGT
TTCGTCTCGATAGAACGCGC

Downstream 100 bases:

>100_bases
ACTGTCGCTGCTGTTCGCCGGGGCCCTTCTGGGGGCATCCGCCATGGTGATGGTCCAGGGCGCACCAGCTTCCACCGCTT
TTGCGGCAGGAAAAGACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MNSIGLFRTLGGFAPLRAGRLLAGFALAGALACAPPAVAQDALKQQRDQMASEYEKLSNELTVTGDTLKQLEDEVASLKK
DQSTITAVLIQSAKTDKKLQQDIADIADRLVALREQEDGIRASLRARRGVLAEVLAALQRMGLNPPPAILVRPDDALASV
RSAVLLGAVVPDMRDQVKELTGDLKDMQHVSASIAQEQEKLKETRTAQAEERERQSLLLEEKKRLQRQSEQEIEAQRKHS
EELAAKAGSLKELIASLDKQMASVREAAEAARKAEAERLAAAKEKAGESTPGDRHLRAQSDFSTLQGRLVLPAAGKIMRR
FGDKDGVGGSMMGQVVETLPSATITSPSDGVVLYAGVFRSYGQLLILDAGNGYHIVMAGMGRIDVAQGQFVLAGEPVGAM
GEKLLASVASVEVGNGAPLLYIEFRKDGKPVDPAPWWTERLSGRTQNDT

Sequences:

>Translated_449_residues
MNSIGLFRTLGGFAPLRAGRLLAGFALAGALACAPPAVAQDALKQQRDQMASEYEKLSNELTVTGDTLKQLEDEVASLKK
DQSTITAVLIQSAKTDKKLQQDIADIADRLVALREQEDGIRASLRARRGVLAEVLAALQRMGLNPPPAILVRPDDALASV
RSAVLLGAVVPDMRDQVKELTGDLKDMQHVSASIAQEQEKLKETRTAQAEERERQSLLLEEKKRLQRQSEQEIEAQRKHS
EELAAKAGSLKELIASLDKQMASVREAAEAARKAEAERLAAAKEKAGESTPGDRHLRAQSDFSTLQGRLVLPAAGKIMRR
FGDKDGVGGSMMGQVVETLPSATITSPSDGVVLYAGVFRSYGQLLILDAGNGYHIVMAGMGRIDVAQGQFVLAGEPVGAM
GEKLLASVASVEVGNGAPLLYIEFRKDGKPVDPAPWWTERLSGRTQNDT
>Mature_449_residues
MNSIGLFRTLGGFAPLRAGRLLAGFALAGALACAPPAVAQDALKQQRDQMASEYEKLSNELTVTGDTLKQLEDEVASLKK
DQSTITAVLIQSAKTDKKLQQDIADIADRLVALREQEDGIRASLRARRGVLAEVLAALQRMGLNPPPAILVRPDDALASV
RSAVLLGAVVPDMRDQVKELTGDLKDMQHVSASIAQEQEKLKETRTAQAEERERQSLLLEEKKRLQRQSEQEIEAQRKHS
EELAAKAGSLKELIASLDKQMASVREAAEAARKAEAERLAAAKEKAGESTPGDRHLRAQSDFSTLQGRLVLPAAGKIMRR
FGDKDGVGGSMMGQVVETLPSATITSPSDGVVLYAGVFRSYGQLLILDAGNGYHIVMAGMGRIDVAQGQFVLAGEPVGAM
GEKLLASVASVEVGNGAPLLYIEFRKDGKPVDPAPWWTERLSGRTQNDT

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=425, Percent_Identity=23.0588235294118, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 48333; Mature: 48333

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIGLFRTLGGFAPLRAGRLLAGFALAGALACAPPAVAQDALKQQRDQMASEYEKLSNE
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LTVTGDTLKQLEDEVASLKKDQSTITAVLIQSAKTDKKLQQDIADIADRLVALREQEDGI
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RASLRARRGVLAEVLAALQRMGLNPPPAILVRPDDALASVRSAVLLGAVVPDMRDQVKEL
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TGDLKDMQHVSASIAQEQEKLKETRTAQAEERERQSLLLEEKKRLQRQSEQEIEAQRKHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELAAKAGSLKELIASLDKQMASVREAAEAARKAEAERLAAAKEKAGESTPGDRHLRAQS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DFSTLQGRLVLPAAGKIMRRFGDKDGVGGSMMGQVVETLPSATITSPSDGVVLYAGVFRS
CHHHHCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHH
YGQLLILDAGNGYHIVMAGMGRIDVAQGQFVLAGEPVGAMGEKLLASVASVEVGNGAPLL
CCCEEEEECCCCEEEEEECCCCEEECCCCEEEECCCHHHHHHHHHHHHHHEECCCCCCEE
YIEFRKDGKPVDPAPWWTERLSGRTQNDT
EEEEECCCCCCCCCCHHHHHHCCCCCCCC
>Mature Secondary Structure
MNSIGLFRTLGGFAPLRAGRLLAGFALAGALACAPPAVAQDALKQQRDQMASEYEKLSNE
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
LTVTGDTLKQLEDEVASLKKDQSTITAVLIQSAKTDKKLQQDIADIADRLVALREQEDGI
EEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RASLRARRGVLAEVLAALQRMGLNPPPAILVRPDDALASVRSAVLLGAVVPDMRDQVKEL
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TGDLKDMQHVSASIAQEQEKLKETRTAQAEERERQSLLLEEKKRLQRQSEQEIEAQRKHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELAAKAGSLKELIASLDKQMASVREAAEAARKAEAERLAAAKEKAGESTPGDRHLRAQS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DFSTLQGRLVLPAAGKIMRRFGDKDGVGGSMMGQVVETLPSATITSPSDGVVLYAGVFRS
CHHHHCCCEEECHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHH
YGQLLILDAGNGYHIVMAGMGRIDVAQGQFVLAGEPVGAMGEKLLASVASVEVGNGAPLL
CCCEEEEECCCCEEEEEECCCCEEECCCCEEEECCCHHHHHHHHHHHHHHEECCCCCCEE
YIEFRKDGKPVDPAPWWTERLSGRTQNDT
EEEEECCCCCCCCCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]