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The map label for this gene is ctpA [H]

Identifier: 163845415

GI number: 163845415

Start: 1276441

End: 1277769

Strand: Reverse

Name: ctpA [H]

Synonym: BSUIS_B1315

Alternate gene names: 163845415

Gene position: 1277769-1276441 (Counterclockwise)

Preceding gene: 163845416

Following gene: 163845414

Centisome position: 91.21

GC content: 58.92

Gene sequence:

>1329_bases
ATGATACGTAAACTGTCGCTGCTGTTCGCCGGGGCCCTTCTGGGGGCATCCGCCATGGTGATGGTCCAGGGCGCACCAGC
TTCCACCGCTTTTGCGGCAGGAAAAGACAGCGATGTCTATAAGGAGCTGGCTCTTTTCGGCGATATTTTCGAGCGTGTAC
GCGCGCAATATGTGACGCCGCCCGACGACAAGAAGCTGATCGAGAGCGCCATCAATGGCATGCTGACTTCTCTTGATCCC
CATTCGTCCTATCTCAACCCGGAAGCCGCGCAGGACATGCGTGTGCAGACCAAGGGTGAGTTTGGCGGCCTTGGCATCGA
AGTCACCATGGACAATGATCTCGTGAAGGTCATCGCGCCGATCGACGATACGCCCGCCTCGAAGGCCGGTGTGCTGTCGG
GCGACCTGATCACCAAGATCGACGGACAGGAAGTGCGCGGCCTTTCGCTGACCGACGCTGTGGACAAGATGCGCGGCGAG
GTTGGTGCGCCAATCGAACTGACGATCCTGCGCAAGGGCGCCGACAAGCCGATCACGCTCAAGATCAATCGCGCCATTAT
CAAGGTGAAGGCGGTTCGCTCGCGCGTTGAGAATGATGTTGGCTATCTGCGTATCATCTCGTTTACCGAACAGACCTCTG
AAGACCTCAAGAAGGCGATCAAGGACATTCAGGAAAAGGTTCCCGCTGACAAGCTCAAGGGCTATGTGCTCGACCTTCGT
CTCAATCCGGGCGGCCTTCTGGATCAGGCGGTTGCCGTTTCCGATGCCTTCCTCGACAAGGGCGAGATCGTTTCCACCCG
TGGCCGCGATCCGCAGGATGTGACCCGTTTCGATGCCCGTAAGGGTGACCTGACGAATGGCAAGCCGCTGATCGTTCTGA
TCAATGGCGGTTCGGCCAGTGCCTCGGAAATCGTTGCCGGTGCGCTTCAGGATCATCGCCGCGCCACGGTGCTCGGTACG
CAGTCCTTCGGCAAGGGCTCTGTGCAGACAATCATCCCGCTTGGCGAAAACGGTTCGCTGCGTCTGACGACGGCGCTTTA
TTACACGCCGTCTGGCAAGTCGATCCAGGGCAAGGGCATTACGCCGGACATCAAGGTGGATCAGCCGCTGCCGCCGGAAC
TTAAAGGCGAGGACGTTGTTCGCGGCGAATCCGAACTCAAGGGCCATATCAAGGGCAATGCCGAAGATGCGAGCGGCTCC
GGTTCGTCGGCTTATGTTCCGCCTGATCCGAAGGATGATCTCCAGCTCAATGAGGCACTGAAGCTTCTGCGGGGCGAAGT
GCCCAATGCCGCTTTCCCGCCGGACCCGAAAAAGGGCGTGCTGAACTGA

Upstream 100 bases:

>100_bases
GGCAATGGTGCGCCATTGCTTTACATTGAATTTCGAAAGGATGGAAAACCCGTCGATCCCGCCCCGTGGTGGACTGAACG
GCTTTCTGGAAGGACACAAA

Downstream 100 bases:

>100_bases
CCCTGAAATGAGCAAGACAAAAACGCGGGAGCCCTGGCTTCCGCGTTTTGCTTTCGGTCAAAGTGCGTTTCATATGTTTG
CTGGGCAGGCATCTGGTCTG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MIRKLSLLFAGALLGASAMVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSLDP
HSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGE
VGAPIELTILRKGADKPITLKINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLR
LNPGGLLDQAVAVSDAFLDKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVLGT
QSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGS
GSSAYVPPDPKDDLQLNEALKLLRGEVPNAAFPPDPKKGVLN

Sequences:

>Translated_442_residues
MIRKLSLLFAGALLGASAMVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSLDP
HSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGE
VGAPIELTILRKGADKPITLKINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLR
LNPGGLLDQAVAVSDAFLDKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVLGT
QSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGS
GSSAYVPPDPKDDLQLNEALKLLRGEVPNAAFPPDPKKGVLN
>Mature_442_residues
MIRKLSLLFAGALLGASAMVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSLDP
HSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGE
VGAPIELTILRKGADKPITLKINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLR
LNPGGLLDQAVAVSDAFLDKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVLGT
QSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGS
GSSAYVPPDPKDDLQLNEALKLLRGEVPNAAFPPDPKKGVLN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=322, Percent_Identity=31.9875776397516, Blast_Score=128, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 47024; Mature: 47024

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKLSLLFAGALLGASAMVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTP
CCCHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDDKKLIESAINGMLTSLDPHSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAP
CCHHHHHHHHHHHHEECCCCCCCCCCCHHHHCCEEEECCCCCCEEEEEEECCCEEEEEEC
IDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPITL
CCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEE
KINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLR
EECCEEEHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEE
LNPGGLLDQAVAVSDAFLDKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSAS
ECCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
ASEIVAGALQDHRRATVLGTQSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGI
HHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEECCCC
TPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNEAL
CCCCCCCCCCCCCCCCCCEECCHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KLLRGEVPNAAFPPDPKKGVLN
HHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRKLSLLFAGALLGASAMVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTP
CCCHHHHHHHHHHHCCCEEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDDKKLIESAINGMLTSLDPHSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAP
CCHHHHHHHHHHHHEECCCCCCCCCCCHHHHCCEEEECCCCCCEEEEEEECCCEEEEEEC
IDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPITL
CCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEE
KINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLR
EECCEEEHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEE
LNPGGLLDQAVAVSDAFLDKGEIVSTRGRDPQDVTRFDARKGDLTNGKPLIVLINGGSAS
ECCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCCCC
ASEIVAGALQDHRRATVLGTQSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGI
HHHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCEEECCCC
TPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNEAL
CCCCCCCCCCCCCCCCCCEECCHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
KLLRGEVPNAAFPPDPKKGVLN
HHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]