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The map label for this gene is dppC [H]

Identifier: 163845124

GI number: 163845124

Start: 987745

End: 988605

Strand: Reverse

Name: dppC [H]

Synonym: BSUIS_B1005

Alternate gene names: 163845124

Gene position: 988605-987745 (Counterclockwise)

Preceding gene: 163845125

Following gene: 163845123

Centisome position: 70.57

GC content: 57.96

Gene sequence:

>861_bases
ATGAGCGAAGCGCAGGTTCTCCCGAAACCGGGTGTGTTCAAAACGGTGCTGCTGAGCCGCAGTCTGTTGATCGGCTCACT
CATCACGATCATTCTGGTAGCGATGGCCGTCGTCTCCTATGTCTGGACACCCTATTCCCCGACCGCGATGAACTTTCGTG
ACAAATTGCAGGGGCCGGGTTTAAGTCACCTGTTCGGGACGGATAATTTCGGGCGCGACGTGTTTTCCATGATCATGGTC
GGCGCACGCAATTCCATTGCCGTGTCGATCATCGCCGTCCTGGTCGGCGCGGGCATCGGCATTCCGCTCGGGTCGCTTGC
GGCAGCGGGGGGCGGGCTGATCGATGGTTTTGTCATGCGCATGACCGATCTTGCCTTTGCTTTTCCAGCCCTTCTAACCG
CTGTCATCATCACCGCGATTTTCGGGCCCGGTGCCGTTAATGCAATGATTGCTATCGGTATTTTCAATATCCCGGTCTTT
GCGCGCGTCACACGCGGCGCATCATTGGGGCTTTGGAAGCGTGAATATGTGCAAGCGGCGCGCTGCGCAGGCCGTGGCGA
TATTTCGATTACGCTTTTGCATGTGCTGCCCAATATCAACCATGTGCTGATCGTGCAGGCGACGATCCAGTTTGCACTGG
CCATCGTGGCCGAAGCGGGGCTTTCCTATGTCGGGCTTGGCACCCAGCCGCCAAGCCCAAGCTGGGGCAAGATGCTCAAC
GACGCACAGACCTATATTTATGATGCGCCATGGCTTGCCATTTTCCCCGGCCTTGCCATCACGCTTGCCGTACTTGGCCT
CAACATGCTGGGCGACGGATTGCGTGACGTGCTCGATCCGCGCGTCGGGAGGCAGAGATGA

Upstream 100 bases:

>100_bases
CGCTGGTGACGTTGCTTGCCGCTTCCGTCATCGGGGTCAATTTCATTGTCGATCTGGTCTATGGCTTTATCGATCCACGC
CTTTCGACGGGAGGCAGCCG

Downstream 100 bases:

>100_bases
CAAAACCACTGCTCGAAATGGACAATATGTCCGTCGAACGGCCAATCGGCCTCAAGGTTGCAGATATCGTGTCCGATATC
ACGCTGACGCTCAATCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSEAQVLPKPGVFKTVLLSRSLLIGSLITIILVAMAVVSYVWTPYSPTAMNFRDKLQGPGLSHLFGTDNFGRDVFSMIMV
GARNSIAVSIIAVLVGAGIGIPLGSLAAAGGGLIDGFVMRMTDLAFAFPALLTAVIITAIFGPGAVNAMIAIGIFNIPVF
ARVTRGASLGLWKREYVQAARCAGRGDISITLLHVLPNINHVLIVQATIQFALAIVAEAGLSYVGLGTQPPSPSWGKMLN
DAQTYIYDAPWLAIFPGLAITLAVLGLNMLGDGLRDVLDPRVGRQR

Sequences:

>Translated_286_residues
MSEAQVLPKPGVFKTVLLSRSLLIGSLITIILVAMAVVSYVWTPYSPTAMNFRDKLQGPGLSHLFGTDNFGRDVFSMIMV
GARNSIAVSIIAVLVGAGIGIPLGSLAAAGGGLIDGFVMRMTDLAFAFPALLTAVIITAIFGPGAVNAMIAIGIFNIPVF
ARVTRGASLGLWKREYVQAARCAGRGDISITLLHVLPNINHVLIVQATIQFALAIVAEAGLSYVGLGTQPPSPSWGKMLN
DAQTYIYDAPWLAIFPGLAITLAVLGLNMLGDGLRDVLDPRVGRQR
>Mature_285_residues
SEAQVLPKPGVFKTVLLSRSLLIGSLITIILVAMAVVSYVWTPYSPTAMNFRDKLQGPGLSHLFGTDNFGRDVFSMIMVG
ARNSIAVSIIAVLVGAGIGIPLGSLAAAGGGLIDGFVMRMTDLAFAFPALLTAVIITAIFGPGAVNAMIAIGIFNIPVFA
RVTRGASLGLWKREYVQAARCAGRGDISITLLHVLPNINHVLIVQATIQFALAIVAEAGLSYVGLGTQPPSPSWGKMLND
AQTYIYDAPWLAIFPGLAITLAVLGLNMLGDGLRDVLDPRVGRQR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=261, Percent_Identity=42.911877394636, Blast_Score=221, Evalue=6e-59,
Organism=Escherichia coli, GI1787760, Length=266, Percent_Identity=37.218045112782, Blast_Score=187, Evalue=5e-49,
Organism=Escherichia coli, GI1789964, Length=248, Percent_Identity=43.5483870967742, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1789889, Length=244, Percent_Identity=34.4262295081967, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1787549, Length=215, Percent_Identity=37.6744186046512, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1787498, Length=261, Percent_Identity=32.5670498084291, Blast_Score=134, Evalue=9e-33,
Organism=Escherichia coli, GI1788505, Length=245, Percent_Identity=26.1224489795918, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30156; Mature: 30025

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAQVLPKPGVFKTVLLSRSLLIGSLITIILVAMAVVSYVWTPYSPTAMNFRDKLQGPG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC
LSHLFGTDNFGRDVFSMIMVGARNSIAVSIIAVLVGAGIGIPLGSLAAAGGGLIDGFVMR
CHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHH
MTDLAFAFPALLTAVIITAIFGPGAVNAMIAIGIFNIPVFARVTRGASLGLWKREYVQAA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHH
RCAGRGDISITLLHVLPNINHVLIVQATIQFALAIVAEAGLSYVGLGTQPPSPSWGKMLN
HHCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHH
DAQTYIYDAPWLAIFPGLAITLAVLGLNMLGDGLRDVLDPRVGRQR
HHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SEAQVLPKPGVFKTVLLSRSLLIGSLITIILVAMAVVSYVWTPYSPTAMNFRDKLQGPG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCC
LSHLFGTDNFGRDVFSMIMVGARNSIAVSIIAVLVGAGIGIPLGSLAAAGGGLIDGFVMR
CHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHH
MTDLAFAFPALLTAVIITAIFGPGAVNAMIAIGIFNIPVFARVTRGASLGLWKREYVQAA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHH
RCAGRGDISITLLHVLPNINHVLIVQATIQFALAIVAEAGLSYVGLGTQPPSPSWGKMLN
HHCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHH
DAQTYIYDAPWLAIFPGLAITLAVLGLNMLGDGLRDVLDPRVGRQR
HHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]