| Definition | Brucella suis ATCC 23445 chromosome II, complete genome. |
|---|---|
| Accession | NC_010167 |
| Length | 1,400,844 |
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The map label for this gene is dppD [C]
Identifier: 163845123
GI number: 163845123
Start: 986723
End: 987748
Strand: Reverse
Name: dppD [C]
Synonym: BSUIS_B1004
Alternate gene names: 163845123
Gene position: 987748-986723 (Counterclockwise)
Preceding gene: 163845124
Following gene: 163845122
Centisome position: 70.51
GC content: 62.96
Gene sequence:
>1026_bases ATGACAAAACCACTGCTCGAAATGGACAATATGTCCGTCGAACGGCCAATCGGCCTCAAGGTTGCAGATATCGTGTCCGA TATCACGCTGACGCTCAATCGCGGCGAACGCCTTGGCGTAGTGGGCGAATCCGGCAGCGGCAAGTCGATCACCGCCCTTG CCGCCATGGGGCTGCTGCCCGACCGGATGCGTGTGCGCGGTACATTGCGCTTCGATGGGCAGGACCTTGCCGCCATGCCG GAAGCCGAATTGTGCAGGATGCGCGGACGGCGCATGGCGATGATCTTTCAGGAGCCGATGACGGCGCTCAATCCGGTCAA GACCATTGGCGCGCAGATTGCCGAAGGACGCCGCCTGCACCTTGGCGAAAGCCGGGCGGATGCGGAGCGTGAAGCGCGCA GGTTGCTTGATCGCGTCGGCTTGCCTGCACCCCGCTTCAATCTCGATCTTTATCCGCACCAGCTTTCCGGCGGGCAGCGC CAGCGTGTGATGATTGCCATGGCGATTGCGTGTGAGCCGGACCTGTTGATAGCCGATGAGCCGACGACAGCCCTCGACGT GACGGTTCAGGCGCAGATTCTTGATCTGATGGATGAGTTGATCGATGAAACCGGCACGGCGCTGATGCTGATCACCCATG ATCTTGGCGTGGTTTCGGAAATGACTGACTGCATTGCGGTCATGTATGCGGGCCGTATCGTTGAGACCGGACGCACCAAC GCCGTGTTCCATCGCATGGCACATCCCTATGCGCGCGGGCTTTTTGCAGCGTCGCCGCATGGCGCGGCGCTCGTACGCCA CAGCGCCACCGGAAGACCTCGCCTTGCGGCCATTCCCGGCGTCGTGCCCGACCCGCTGGCGCGCCCGCCGCATTGCACCT TTGCCGACCGCTGCGCCTTCGTGCAGGGCGATTGCCGTCGGGCAATCCCGCCGCTCGACCGGCTTGGCGAGGATGAGGGC ATTGCGCATCGCGCTGCCTGTTTCCATCCGCGTACCGGCAATGTGGTGGCAGAGGTGCAGGCATGA
Upstream 100 bases:
>100_bases CCATTTTCCCCGGCCTTGCCATCACGCTTGCCGTACTTGGCCTCAACATGCTGGGCGACGGATTGCGTGACGTGCTCGAT CCGCGCGTCGGGAGGCAGAG
Downstream 100 bases:
>100_bases GCGACATGATCTTGCAGGTACGTGATGTCGTGCGGGAGTATCAGCTTGCGCGCGCGTCGTTTTTCTCAAAGCCAGCTTCC TTGCGTGTTCTCCACGGTGT
Product: oligopeptide/dipeptide ABC transporter ATP-binding protein
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTKPLLEMDNMSVERPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLPDRMRVRGTLRFDGQDLAAMP EAELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLHLGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQR QRVMIAMAIACEPDLLIADEPTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDCIAVMYAGRIVETGRTN AVFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAFVQGDCRRAIPPLDRLGEDEG IAHRAACFHPRTGNVVAEVQA
Sequences:
>Translated_341_residues MTKPLLEMDNMSVERPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLPDRMRVRGTLRFDGQDLAAMP EAELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLHLGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQR QRVMIAMAIACEPDLLIADEPTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDCIAVMYAGRIVETGRTN AVFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAFVQGDCRRAIPPLDRLGEDEG IAHRAACFHPRTGNVVAEVQA >Mature_340_residues TKPLLEMDNMSVERPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLPDRMRVRGTLRFDGQDLAAMPE AELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLHLGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQRQ RVMIAMAIACEPDLLIADEPTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDCIAVMYAGRIVETGRTNA VFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAFVQGDCRRAIPPLDRLGEDEGI AHRAACFHPRTGNVVAEVQA
Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for energy coupling to the transport system [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI156105685, Length=266, Percent_Identity=31.203007518797, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI255708477, Length=219, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI9961250, Length=235, Percent_Identity=31.4893617021277, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI4505771, Length=235, Percent_Identity=31.4893617021277, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI9961252, Length=235, Percent_Identity=31.4893617021277, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI148612844, Length=220, Percent_Identity=33.1818181818182, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI42741659, Length=234, Percent_Identity=31.1965811965812, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI9665248, Length=232, Percent_Identity=31.8965517241379, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI171184400, Length=241, Percent_Identity=29.045643153527, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1789963, Length=329, Percent_Identity=47.112462006079, Blast_Score=275, Evalue=3e-75, Organism=Escherichia coli, GI48994883, Length=306, Percent_Identity=48.0392156862745, Blast_Score=268, Evalue=4e-73, Organism=Escherichia coli, GI1787759, Length=334, Percent_Identity=43.4131736526946, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI145693107, Length=248, Percent_Identity=52.8225806451613, Blast_Score=243, Evalue=1e-65, Organism=Escherichia coli, GI1788506, Length=263, Percent_Identity=46.7680608365019, Blast_Score=221, Evalue=4e-59, Organism=Escherichia coli, GI1789962, Length=336, Percent_Identity=35.1190476190476, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1787548, Length=308, Percent_Identity=36.038961038961, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1787500, Length=295, Percent_Identity=39.3220338983051, Blast_Score=191, Evalue=5e-50, Organism=Escherichia coli, GI1789890, Length=245, Percent_Identity=41.6326530612245, Blast_Score=167, Evalue=6e-43, Organism=Escherichia coli, GI1787758, Length=286, Percent_Identity=36.3636363636364, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI48994997, Length=264, Percent_Identity=36.3636363636364, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1786398, Length=256, Percent_Identity=32.421875, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789891, Length=213, Percent_Identity=37.5586854460094, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1787547, Length=266, Percent_Identity=31.5789473684211, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1789032, Length=234, Percent_Identity=35.042735042735, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786703, Length=204, Percent_Identity=38.2352941176471, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1787089, Length=213, Percent_Identity=38.0281690140845, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=33.4763948497854, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1786872, Length=219, Percent_Identity=34.2465753424658, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI87081834, Length=223, Percent_Identity=33.6322869955157, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=32.2314049586777, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=33.4883720930233, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1787105, Length=226, Percent_Identity=32.3008849557522, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87081791, Length=252, Percent_Identity=31.3492063492063, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788761, Length=223, Percent_Identity=31.390134529148, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1786563, Length=213, Percent_Identity=35.2112676056338, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1787370, Length=232, Percent_Identity=28.8793103448276, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1790162, Length=224, Percent_Identity=29.4642857142857, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787712, Length=255, Percent_Identity=30.1960784313725, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI87081709, Length=286, Percent_Identity=27.972027972028, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1788644, Length=177, Percent_Identity=32.7683615819209, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789672, Length=229, Percent_Identity=30.5676855895196, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1790467, Length=240, Percent_Identity=30.4166666666667, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1789873, Length=192, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1789991, Length=249, Percent_Identity=25.3012048192771, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790525, Length=220, Percent_Identity=29.0909090909091, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786253, Length=243, Percent_Identity=29.2181069958848, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1789586, Length=221, Percent_Identity=31.6742081447964, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786803, Length=224, Percent_Identity=28.125, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI1786319, Length=242, Percent_Identity=26.8595041322314, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786345, Length=220, Percent_Identity=30, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082267, Length=242, Percent_Identity=29.3388429752066, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790739, Length=222, Percent_Identity=30.6306306306306, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1788165, Length=221, Percent_Identity=27.6018099547511, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI48995001, Length=237, Percent_Identity=29.535864978903, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI48994943, Length=270, Percent_Identity=28.1481481481481, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790534, Length=203, Percent_Identity=30.0492610837438, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1788053, Length=199, Percent_Identity=27.1356783919598, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1787792, Length=249, Percent_Identity=27.3092369477912, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790190, Length=234, Percent_Identity=27.3504273504274, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787164, Length=83, Percent_Identity=39.7590361445783, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1786654, Length=237, Percent_Identity=29.957805907173, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787143, Length=235, Percent_Identity=30.6382978723404, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI193209708, Length=239, Percent_Identity=32.2175732217573, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI193202349, Length=219, Percent_Identity=30.5936073059361, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI115535101, Length=218, Percent_Identity=29.3577981651376, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17567265, Length=218, Percent_Identity=28.8990825688073, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17558664, Length=247, Percent_Identity=27.9352226720648, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17567269, Length=238, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71992290, Length=236, Percent_Identity=27.1186440677966, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17569145, Length=258, Percent_Identity=29.0697674418605, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193208177, Length=225, Percent_Identity=28, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=242, Percent_Identity=30.5785123966942, Blast_Score=64, Evalue=4e-11, Organism=Drosophila melanogaster, GI24641565, Length=244, Percent_Identity=31.9672131147541, Blast_Score=82, Evalue=6e-16, Organism=Drosophila melanogaster, GI28574533, Length=253, Percent_Identity=24.901185770751, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI85726357, Length=243, Percent_Identity=27.5720164609054, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24659289, Length=220, Percent_Identity=30, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574744, Length=225, Percent_Identity=27.1111111111111, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI24653245, Length=237, Percent_Identity=27.4261603375527, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI17136662, Length=221, Percent_Identity=29.4117647058824, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI281363262, Length=234, Percent_Identity=29.4871794871795, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 37042; Mature: 36910
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPLLEMDNMSVERPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLP CCCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCEEEEEECCCCCCEEHHHHHHCCCC DRMRVRGTLRFDGQDLAAMPEAELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLH CCCEEEEEEEECCCCCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEE LGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQRQRVMIAMAIACEPDLLIADE CCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCHHCCCCCCEEEEEEEEEECCCCEEEECC PTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDCIAVMYAGRIVETGRTN CCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEECCCCH AVFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAF HHHHHHHCHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHEE VQGDCRRAIPPLDRLGEDEGIAHRAACFHPRTGNVVAEVQA ECCCHHHCCCCHHHCCCCCCCHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure TKPLLEMDNMSVERPIGLKVADIVSDITLTLNRGERLGVVGESGSGKSITALAAMGLLP CCCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECCCEEEEEECCCCCCEEHHHHHHCCCC DRMRVRGTLRFDGQDLAAMPEAELCRMRGRRMAMIFQEPMTALNPVKTIGAQIAEGRRLH CCCEEEEEEEECCCCCCCCCHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCEEE LGESRADAEREARRLLDRVGLPAPRFNLDLYPHQLSGGQRQRVMIAMAIACEPDLLIADE CCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCHHCCCCCCEEEEEEEEEECCCCEEEECC PTTALDVTVQAQILDLMDELIDETGTALMLITHDLGVVSEMTDCIAVMYAGRIVETGRTN CCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEECCCCH AVFHRMAHPYARGLFAASPHGAALVRHSATGRPRLAAIPGVVPDPLARPPHCTFADRCAF HHHHHHHCHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCHHHHHEE VQGDCRRAIPPLDRLGEDEGIAHRAACFHPRTGNVVAEVQA ECCCHHHCCCCHHHCCCCCCCHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA