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The map label for this gene is yvrC [H]

Identifier: 163844885

GI number: 163844885

Start: 725011

End: 726045

Strand: Reverse

Name: yvrC [H]

Synonym: BSUIS_B0747

Alternate gene names: 163844885

Gene position: 726045-725011 (Counterclockwise)

Preceding gene: 163844886

Following gene: 163844884

Centisome position: 51.83

GC content: 56.14

Gene sequence:

>1035_bases
ATGAAAATCATAAAAAACAGGCCATTCCTTGCTGCTTTTTATAGTTTCGCTTTTCTCGTTACCGGCTTTTCAGGCTCTTC
GCTTGCTGGTGAAACCCGCTATCCGCTGACGCTGAAAAATTGCGGACGTGAGGTGACTTTCCATCACGCGCCGCAGCGTG
CGGTCGCTATCGGCCAGAGCAGCGCGGAAATCCTCTATAATCTGGGTCTCGGTGACAGGGTTGTAGGCACGGCAGTCTGG
TTCGGCCCGGTCATGAAGGGCTATGAGGAGGTGAACGCCAGGGTAAAGCGCCTTGCCGATAATGATCCGAGCCTTGAAAG
CGTCCTTGCACAGAAGCCGGATATGGTGGCCGCGCAATTCCAGTGGCATGTCGGCCCCGAAGGCATCGTCGCCAAACCGG
AACAATTCGAGGAACTTGGCATTCCCGTCTATACCGCACCAGCAGATTGCATCGGAAAGGTTAATTCCGGCAAGGGCGAC
GGCGTGCGCCACACTGTCTTCACCATGGACCTGATCTATCAGAAAATCAGGGAGTTGGCGGAGATTTTCAATGTGCAGGA
TCGCGGCGAGAAGGTGATTGCCGATCTGAAGGCGCGCGAGGAAGCCGCCCGCAAGAAAATCGCATCGGCCAATGGCAGGC
TTTCCGCCGTCGTCTGCTTCTCCAGTGCGCAAATGGACATTGATCCCTATGTGGCAGGCAAGAACGGCGCGCCTGCCTAT
ATTCTTTCCGCGCTCGGCATCAGGAATGTGATCGGCAGCGAGGAAGAATGGCCAACGGTCGGCTGGGAGACCATCGCCAA
GTCTGACCCGACCATGATTATTGCAGGCAAGATGGATCGCCGCCGCTACCCCGCCGATGATATTGCCGTAAAACGCAAGT
TTCTGGAGACCGATCCGGTCGCAAGCCTGATGCCTGCGGTGAAGGATGGCCATGTCTTCGATATGGATGCGCAAGCCATG
AACCCGACCATCCGCACCATAGAAGGCATTGAAACGCTGGCTGATGCCATTGCTGCCGCCGGGCTGAACAAGTGA

Upstream 100 bases:

>100_bases
CTGCGCCATGTTTCGATGCGTGCCTGCCATTTGATGCATTTCCAGACGCAAACGGCTTTTCGCGTTTTAGAAAATGCTCT
GGTTATTTCGGGGATATTTC

Downstream 100 bases:

>100_bases
CGGTGCGCGCCGCCGCGATACGGTTTTCAATGAAAAGCCGGATGGGCGCCGGGGTGCTGGCGCTTGTCCTGTTATTCGTG
GCTTTGTGGCTGGGGGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKIIKNRPFLAAFYSFAFLVTGFSGSSLAGETRYPLTLKNCGREVTFHHAPQRAVAIGQSSAEILYNLGLGDRVVGTAVW
FGPVMKGYEEVNARVKRLADNDPSLESVLAQKPDMVAAQFQWHVGPEGIVAKPEQFEELGIPVYTAPADCIGKVNSGKGD
GVRHTVFTMDLIYQKIRELAEIFNVQDRGEKVIADLKAREEAARKKIASANGRLSAVVCFSSAQMDIDPYVAGKNGAPAY
ILSALGIRNVIGSEEEWPTVGWETIAKSDPTMIIAGKMDRRRYPADDIAVKRKFLETDPVASLMPAVKDGHVFDMDAQAM
NPTIRTIEGIETLADAIAAAGLNK

Sequences:

>Translated_344_residues
MKIIKNRPFLAAFYSFAFLVTGFSGSSLAGETRYPLTLKNCGREVTFHHAPQRAVAIGQSSAEILYNLGLGDRVVGTAVW
FGPVMKGYEEVNARVKRLADNDPSLESVLAQKPDMVAAQFQWHVGPEGIVAKPEQFEELGIPVYTAPADCIGKVNSGKGD
GVRHTVFTMDLIYQKIRELAEIFNVQDRGEKVIADLKAREEAARKKIASANGRLSAVVCFSSAQMDIDPYVAGKNGAPAY
ILSALGIRNVIGSEEEWPTVGWETIAKSDPTMIIAGKMDRRRYPADDIAVKRKFLETDPVASLMPAVKDGHVFDMDAQAM
NPTIRTIEGIETLADAIAAAGLNK
>Mature_344_residues
MKIIKNRPFLAAFYSFAFLVTGFSGSSLAGETRYPLTLKNCGREVTFHHAPQRAVAIGQSSAEILYNLGLGDRVVGTAVW
FGPVMKGYEEVNARVKRLADNDPSLESVLAQKPDMVAAQFQWHVGPEGIVAKPEQFEELGIPVYTAPADCIGKVNSGKGD
GVRHTVFTMDLIYQKIRELAEIFNVQDRGEKVIADLKAREEAARKKIASANGRLSAVVCFSSAQMDIDPYVAGKNGAPAY
ILSALGIRNVIGSEEEWPTVGWETIAKSDPTMIIAGKMDRRRYPADDIAVKRKFLETDPVASLMPAVKDGHVFDMDAQAM
NPTIRTIEGIETLADAIAAAGLNK

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 37431; Mature: 37431

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKNRPFLAAFYSFAFLVTGFSGSSLAGETRYPLTLKNCGREVTFHHAPQRAVAIGQS
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCEEEEECCCCHHEEECCC
SAEILYNLGLGDRVVGTAVWFGPVMKGYEEVNARVKRLADNDPSLESVLAQKPDMVAAQF
CHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEE
QWHVGPEGIVAKPEQFEELGIPVYTAPADCIGKVNSGKGDGVRHTVFTMDLIYQKIRELA
EEECCCCCCCCCCHHHHHCCCCEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EIFNVQDRGEKVIADLKAREEAARKKIASANGRLSAVVCFSSAQMDIDPYVAGKNGAPAY
HHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCHHH
ILSALGIRNVIGSEEEWPTVGWETIAKSDPTMIIAGKMDRRRYPADDIAVKRKFLETDPV
HHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCH
ASLMPAVKDGHVFDMDAQAMNPTIRTIEGIETLADAIAAAGLNK
HHHHHHHCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKIIKNRPFLAAFYSFAFLVTGFSGSSLAGETRYPLTLKNCGREVTFHHAPQRAVAIGQS
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHCCCEEEEECCCCHHEEECCC
SAEILYNLGLGDRVVGTAVWFGPVMKGYEEVNARVKRLADNDPSLESVLAQKPDMVAAQF
CHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEE
QWHVGPEGIVAKPEQFEELGIPVYTAPADCIGKVNSGKGDGVRHTVFTMDLIYQKIRELA
EEECCCCCCCCCCHHHHHCCCCEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
EIFNVQDRGEKVIADLKAREEAARKKIASANGRLSAVVCFSSAQMDIDPYVAGKNGAPAY
HHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCHHH
ILSALGIRNVIGSEEEWPTVGWETIAKSDPTMIIAGKMDRRRYPADDIAVKRKFLETDPV
HHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCH
ASLMPAVKDGHVFDMDAQAMNPTIRTIEGIETLADAIAAAGLNK
HHHHHHHCCCCEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]